Cyanistes caeruleus (blue tit): 111935227
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Entry
111935227 CDS
T05602
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
111935227
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccae02000
]
111935227
Transporters [BR:
ccae02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
111935227
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
111935227
NCBI-ProteinID:
XP_023791366
UniProt:
A0A8C0VXT4
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Position
12
AA seq
545 aa
AA seq
DB search
MSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLG
VWKLAPMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKHCENPWNTDRCF
SNYTLANTTNMTSAVVEFWERNMHQMTDGLEKPGQIRWPLAITLAIAWILVYFCIWKGVG
WTGKVVYFSATYPYVMLLILFFRGVTLPGAKEGILFYITPNFSKLSDSEVWLDAATQIFF
SYGLGLGSLIALGSYNPFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMANVTKRPIA
DVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLMLGIDSQFCTVEGFITALVDEFPK
LLRNRRELFIAVVCIVSYVIGLSNITQGGIYVFKLFDYYSASGMSLLFLVFFECISISWC
YGVNRFYDNIQEMVGYRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPLTMGSYVFPKWGQ
GVGWFMALSSMVLIPGYMAYMFLTLKGSLKQRIQVMIQPSEDITHPENGPDQAQQSNSAN
KEAYI
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtaggttatgccattggcttagggaatgtgtggagatttccgtacctgtgc
ggcaagaacggtggaggtgcattcctgatcccttatttccttactttaatttttgctgga
gtgcccctgttccttttggagtgctccctaggtcagtacacatctataggaggccttgga
gtgtggaagcttgctccaatgttcaaaggtgtgggactggctgctgcagtcctgtccttt
tggctaaatatttactacattgtgattatttcctgggccatatactacctgtataattcc
tttaccactacccttccttggaagcactgtgagaacccctggaacaccgaccgctgcttc
tccaactacaccttagccaacaccaccaacatgacaagtgccgtggtggagttctgggaa
cgcaacatgcaccaaatgaccgatggcttggaaaagccggggcaaatccgatggccgctg
gcaatcaccctggcaattgcctggattctggtgtatttttgtatctggaagggggtaggc
tggactggaaaggtggtatatttctctgctacttatccctatgttatgctgcttatcttg
ttcttccgtggtgtaacactgcctggagcaaaggaaggcattttattctatataactccc
aacttcagtaagctttcagactctgaggtttggctggatgctgccacacagattttcttc
tcctacggtttgggtcttggttcactgattgcccttggaagttacaaccctttccacaat
aatgtttacagggactccatcatagtgtgctgcataaactcatgcacgagcatgtttgct
ggctttgtcatcttctccatcgtgggattcatggccaatgtcacaaagaggccgattgca
gacgttgcagcatcaggccctgggctggcgtttctggcttaccccgaggcagtgacacag
ttgcccatctcccctttgtgggcgatactcttcttctccatgctgctcatgctgggcatt
gacagccagttctgcaccgtggagggcttcatcacagccctggtggacgagttccccaag
ctgctgcgcaaccgccgcgagctcttcatcgccgtggtgtgcatcgtgtcctacgtgata
gggctgtccaacatcactcagggtggaatctacgtgtttaagctttttgactactactct
gccagtggaatgagcctcttgttccttgtattctttgagtgcatctcgatatcctggtgc
tatggtgttaatagattttatgacaacatccaagagatggtgggatacagaccctgcatc
tggtggaagctctgctggtcctttttcactcctatcatcgtggcaggagtgttcatcttc
agcgccgtgcagatgaccccgctgaccatggggagttacgtgttcccaaaatggggccag
ggggtcggctggttcatggccctgtcctctatggtgctgatacctggctacatggcatac
atgttcctaaccctgaaaggctccctaaaacagcgcatccaagtgatgattcagccaagt
gaagacatcacccaccctgagaatgggccagaccaggcccaacagagcaactctgccaac
aaagaagcctacatctaa
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