Cyanistes caeruleus (blue tit): 111935453
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Entry
111935453 CDS
T05602
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
111935453 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111935453 (DDX41)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111935453 (DDX41)
Spliceosome [BR:
ccae03041
]
Complex C
Other components
Complex C specific factors
111935453 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
Utp25_C
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
111935453
NCBI-ProteinID:
XP_023791591
UniProt:
A0A8C0Z9L5
LinkDB
All DBs
Position
13
AA seq
617 aa
AA seq
DB search
MEAVAERKRQREEPADTSDLSGEDDEDYVPYVPVKQRKQQMLQKLLQMRRKVVSEEEQRD
SGSEQRGDEDDIPLGPQSNISLLDQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRA
LMSVKEMAKGITYDDPIKTSWRAPRYILGMSEARHDRVRKKYHILVEGEGIPPPIKSFKE
MKFPAAILRGLKKKGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLE
QEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDGLPPLRCALCIGGMSVKE
QMETIKHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYF
KGQRQTLLFSATMPKKIQNFAKSALVKPITINVGRAGAASLDVVQEVEYVKEEAKMVYLL
ECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRDGKKDV
LVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVL
MDLKALLLEAKQKVPPVLQVLHCGDETMLDIGGERGCAFCGGLGHRITDCPKLEAMQTKQ
VSNIGRKDYLAHSSMDF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtggcggagcggaagaggcagcgcgaggagccggcggacacgtccgacctg
tccggagaggatgatgaggattacgtgccctacgtgcccgtcaagcagcgcaagcagcag
atgctgcagaagctgctgcagatgcggcggaaggtggtgtcggaggaggagcagagggac
agcgggagcgagcagcggggggacgaggatgacatcccgttggggcctcagtccaacatc
agcctgctggaccagcaccagcacctcaaagagaaggcagaagctcggaaggagtcagcc
aaagagaagcagctgaaggaggaagagaagatcctggagagtgtggcagagggccgagct
ctgatgtcggtgaaggagatggccaagggcatcacctatgatgacccaatcaaaaccagc
tggagagcccctcgctacatcctgggcatgtcggaggcgcggcacgaccgtgtacgcaag
aagtaccacatcctggtggagggggagggcatcccaccccccatcaagagcttcaaggag
atgaagttcccagcagctatcctgagaggcctgaagaaaaaaggaatccagcagccaaca
cccatacagatccaaggcatccccacaatcctctcaggaagggatatgattggcattgca
ttcactggctctgggaagaccttagtgttcaccctccctgtgatcatgttctgcctggag
caggagaagaggctgccattctctaagcgagagggaccctatggactcatcatctgtccc
tcgcgggagctggcccggcagacccatggcatcctggagtactactgccgtctgctgcag
gaggatgggctgcccccgctgcgctgcgccctctgcatcgggggcatgtctgtcaaggag
cagatggagaccatcaaacatggggtacacatgatggtggcaacccctgggcgcctgatg
gacctgctgcagaagaagatggtgagcctggacatctgccggtacctggccttggatgag
gctgacaggatgatcgatatgggctttgagggggacatccgtaccatcttctcctacttc
aagggccagcggcaaaccctcctcttcagtgccacaatgcccaagaagatccagaacttt
gccaagagtgctctggtgaagccaatcaccattaatgttgggcgagcgggtgctgccagc
ctggatgttgtgcaggaggtggagtatgtgaaagaggaggccaagatggtgtacctgttg
gagtgcctgcagaagacccctccacctgtgctgatcttcgcagagaagaaggcagatgtc
gatgcaatccacgagtacttgctgctcaagggtgtggaagctgtggccatccatggaggg
aaagatcaggaagaacggacaaaagccattgaggccttccgggatgggaagaaggatgtc
ctggttgccactgatgtcgcttccaagggcctggacttcccagcaatccagcacgtcatc
aactacgacatgccagaggagattgagaactatgttcaccgcatcgggcgtacaggccgt
tcaggcaacactggcattgccaccaccttcatcaacaaggcctgtgatgaatcggtgctg
atggacctgaaggctctgctcctggaggcaaagcagaaggtgccacctgtgctccaggtg
ctgcactgtggagatgagaccatgctggacattggaggtgagaggggctgtgccttctgt
ggtggcctgggccatcgcatcaccgactgccccaagctggaggcgatgcagaccaagcaa
gtcagcaacattggccgcaaggactacctggcccacagctctatggacttctag
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