Cyanistes caeruleus (blue tit): 111935620
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Entry
111935620 CDS
T05602
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1
KO
K09444
interferon regulatory factor 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111935620 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111935620 (IRF1)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111935620 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
DUF684
Motif
Other DBs
NCBI-GeneID:
111935620
NCBI-ProteinID:
XP_023791866
UniProt:
A0A8C0UMJ7
LinkDB
All DBs
Position
13
AA seq
318 aa
AA seq
DB search
MPVSRMRMRPWLELQIDSNQIPGLIWINKDKRIFQIPWKHAAKHGWDMEKDACLFRSWAI
HTGRYKEGEKNPDPKTWKANFRCAMNSLPDIEEMKDKSINRGSSAVRVYRMLPPLTKHQK
KERKSKSSREVRNKSKRKCYEETRLKESAETLTNTPLPDDHSGYTIHNYAGQEVEVESTA
ITLDLSSCEVSGSLTDWRPAMEVTMADSTNDLYQLQVSPLASSSEVTDEDEEEINPDIFK
LLGPAQDWYNTSIGGKGFLTNDSGTQTQCSTYGYKEQDGDIDTTSGEMDFRFFDQKSSLD
FSWLDTVRPTMQVIPCGL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgccagtgtcaagaatgcgcatgaggccctggctggaattgcagattgattccaaccaa
ataccaggactgatatggattaacaaggataagaggatatttcaaatcccgtggaaacat
gcagctaagcatggctgggacatggagaaggatgcctgccttttcaggagttgggccatt
catacaggaaggtataaagaaggtgagaaaaatcctgatccaaaaacctggaaggcaaat
ttccgctgtgccatgaattccctgcctgacattgaagaaatgaaggataaaagcatcaac
aggggctccagtgctgtcagggtttacaggatgctgccacccttgacaaagcatcagaag
aaagaaaggaagtcgaagtcttcaagagaagtaagaaacaagagcaagagaaagtgttat
gaagagacaaggctgaaagagtcagcagaaaccttaaccaacactcctttgccagatgac
cacagtggctacaccattcacaattatgcagggcaggaagtggaggtggagagcacagcc
atcaccttagacctgtcctcctgcgaggtgagcggctccctgaccgactggaggccagca
atggaagtcaccatggctgacagcaccaatgacctctaccagctccaggtgtctcccctg
gcttcgtcctctgaagtcacagatgaagatgaagaggaaataaatccagatatttttaag
ctgcttggaccagcccaagactggtacaacaccagcattggggggaaaggctttctcacc
aacgactcgggcacccagacccagtgcagcacctacgggtacaaggagcaggacggggat
attgacaccacatcaggagagatggattttaggttctttgaccagaaaagcagcctagac
ttctcctggctggatacagtgaggccaaccatgcaagtcattccctgtggattgtaa
DBGET
integrated database retrieval system
