Cyanistes caeruleus (blue tit): 111935660 Help Entry 111935660         CDS       T05602                                  Name (RefSeq) protocadherin beta-4-like   KO K16494   protocadherin beta Organism ccae  Cyanistes caeruleus (blue tit) Brite KEGG Orthology (KO) [BR:ccae00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:ccae04515]     111935660 Cell adhesion molecules [BR:ccae04515]  Cadherins   Protocadherins    111935660 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_2 Cadherin_C_2 Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  111935660 NCBI-ProteinID:  XP_023791921 LinkDB All DBs Position 13 AA seq 1048 aa AA seqDB search MAIARQVLCLSAFLWLPPARAEPIRYSVAEEAESGSLVGELAEDAGLTPAQLSARRARLV SEDGRQHFALERGSGRLLVAGRLDREELCGQSATCMLPFELLLSNPLQFFRVEVALEDIN DHSPVFREDRLRIRIPETSNPGSRFPLEVAQDLDIGSNTVQAYSISPENNYFSVSYGSQS EDDKYVELVLEKPLDREEQEEMSFSVIAVDGGSPPRSGTIEISIIILDANDNAPTFMQER YIVKVLENMPEGSVVLTVLATDQDAGVYGEISYQLSEAADQSVSIFVIDPITGEIKITKP LDFEAVQSHELSVTATDGGGLSAICKVLVEVVDVNDNAPEVVVSSFSSPLPEDTAPGTVV ALFTVRDRDSGANGKISCGLEDQRFFSLRPAYKNYYELVTVSALDREETARYILRVTAAD AGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRENNVPTVFVGAVSAADADVGLNGK VSYSLAAVQAAEGPWCSCVSVNSENGHVFVLRPLDYERLRQTEVTVSASDAGSPPLRANV SVRLVVLDENDNAPLVLYPGQDSSPASSELVPVSAEAGYLITKVVAVDADSGQNSWLSYH LLRASEPGLFTVGVHSGEVRLRRPVTERDSVRQKLLVLVRDNGKPPLSATAAVSALLLKD LSDVRLPGHSSPAPEDQAGSLTTYLIIALVCVSLLFLVSTALFVARKVCKRKELKAGHVL YGADNLQSGLADGAAAGSLPRAYCYEISLTTGSGNSEFKFLKPILPSVPPQHCAVGQGPE DEQHFPCVPVKAAAGGPSSPFEVVPRSAEAGYLVAKVVAVDADAGRNAWLSYELVQASEP ALFRVGLHSGEVRTARAVSERDAAKQRVVAVVKDHGQPALSATATLHVVLAESLQEALPE LTDRDAVSELTSDLNLILVVSLSVVSLLFVSTAPYNYCSSTLPLPYSYEVCLASESGQKD FTFLRPGAAALSARLLSADPGSGTPSGKDPPSPGSSAQSVGLELMVQCNSKSGIEQKELF VPCCHRLLWNLSGVEKNAQERGSGWDLA NT seq 3147 nt NT seq  +upstreamnt  +downstreamnt atggcgatcgcaaggcaagtgctttgtctgtctgctttcctgtggctgccgcccgctcgc gccgagcccatccgctactccgtagccgaggaggcggaaagcggctccctggtgggcgag ctggcggaggacgcggggctgacgccggcgcagctctcggctcgccgcgcccgcctggtg tcggaggacggccggcagcattttgccttagagcgcggctccggccgcctgctcgtggcg gggaggctggaccgggaggagctgtgcggccagtccgccacctgcatgctccccttcgag ctgctgctctccaaccccctgcagttctttcgggtcgaggtggctctggaggatatcaat gaccattcacctgttttccgagaagatcgattaagaattaggatccctgaaacgagcaac cctggttcacgtttcccgttggaggtggctcaggatctcgatattggcagcaacacagtc caggcatacagcatctctcccgagaataattatttcagcgtctcctatggaagtcaaagt gaggatgacaaatatgttgaacttgttttggaaaagccactagacagagaggagcaggaa gagatgagttttagtgtcattgctgtagatgggggctctcctcctagaagtggcaccatc gagatctctattattattctggatgcaaatgacaatgctccgacattcatgcaagagcgt tacattgtgaaggttttggagaacatgccagaagggtctgtagtgctgactgtgctggca acagatcaggatgcaggtgtctatggggaaatttcctaccaactaagtgaagctgcggac cagagtgtctcaatatttgtgattgatcccataacgggtgaaattaaaatcacaaaacct ctggactttgaggcagtacaaagtcacgaactgagtgtaacagccacagatggtggggga ctctcagccatctgcaaagtgctggtggaggtggtggatgtgaatgacaatgccccagag gtggtggtcagctccttcagcagtcccctccccgaggacacagcgcccggcacggtggtt gccctgtttacggtcagggaccgggattctggggccaacgggaagatctcgtgtggcctc gaggatcagcgcttcttctcgctgcggccagcctataagaattactatgagctggtgaca gtgagcgcgctggaccgcgaggagacggctcgctacatcctcagggtgacggcggcagac gcggggtcgcctcctctgacgagcacgcagaccttcaccgtggacatctcggatgtcaat gacaacgcccccgtcttcaaccagacgtcgtacaccatgtacgtgcgtgagaacaatgtg cccacggtgtttgttggagccgtcagcgctgccgacgctgacgtggggctcaatggcaag gtgagctattcgctggcagcggtgcaggcggcagaggggccttggtgctcgtgcgtgtct gtgaactctgagaacgggcacgtgtttgtgctgcggcccctggactacgagcgcttgagg cagacggaggtgacggtcagtgcctctgacgcgggctctcctcccctcagagccaacgtc agcgtccgcctcgtggtgctggacgagaacgacaacgccccgctcgtgctgtacccaggc caggacagcagcccagcgtccagtgagctggtgcccgtgtcggccgaggcgggctacctc atcaccaaagtggtggccgtggatgccgactccgggcagaactcgtggctctcgtaccac ctgctgagggccagcgagccagggctgttcacggtgggtgtccacagcggggaggtgcgt ctgaggaggccggtgacggagagagacagcgtgaggcagaagctccttgtcctggtcaga gacaacggcaagccgcccctgtcggccacggcagctgtgagcgcgctcctgctcaaggac ttgtcagacgtgcgcctccccgggcacagcagcccggcgccagaggatcaggctggctcc ctcaccacctatttaatcattgccctggtgtgtgtctccctgctcttcctggtctccacc gcactctttgtggctcgcaaggtgtgcaagagaaaggagctgaaggctggccatgtgctt tatggtgccgacaacttgcagagcggcctggccgatggggccgctgcagggagcctgccc cgcgcctattgctacgagatcagcctcacaacgggctcgggcaacagcgagttcaaattc ctcaagcccatcctgcccagcgtgccaccacagcactgcgccgtgggccagggcccggag gatgaacagcatttcccctgtgtccctgtcaaggcggcggcgggagggccgtcgtctccg ttcgaggtggtgccgcgctcggccgaggccggctacctggtggccaaggtggtggcggtg gacgcggacgcggggcgcaacgcgtggctgtcgtacgagctggtgcaggcgtcggagccg gcgctgttccgcgtggggctgcacagcggcgaggtgcgcacggcgcgcgccgtgtccgag cgggacgcggccaagcagcgtgtggtggccgtggtgaaggaccacgggcagccggcgctg tcggccacggccacgctgcacgtggtgctggccgagagcttgcaggaggcgctgccggag ctcacagacagagatgctgtgtccgagctgacttctgatctgaacctcattcttgttgtg tcgctctccgtcgtgtccttattatttgtttccacggcaccatacaactactgcagcagc acgctgcccttgccctattcctacgaggtatgtttagcctccgagtcggggcagaaggac ttcacgttcctgaggccaggagcggcagccttgtctgcccgtctcctgtccgctgatccc ggctcaggcactccttctgggaaggaccctcctagccccgggagctcggcacagtctgta gggctggagttgatggttcagtgtaactccaagtctggcatcgagcagaaggagcttttt gttccctgctgccaccggcttctgtggaacctcagtggagtcgagaaaaatgcccaagag cgcggttcaggctgggatttggcttga

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