Cyanistes caeruleus (blue tit): 111935830
Help
Entry
111935830 CDS
T05602
Symbol
IFT140
Name
(RefSeq) intraflagellar transport protein 140 homolog isoform X1
KO
K19672
intraflagellar transport protein 140
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccae03037
]
111935830 (IFT140)
Cilium and associated proteins [BR:
ccae03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
111935830 (IFT140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IF140-IFT172
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
TPR_IF140_C
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
TPR_IFT80_172
WD40
TPR_GEMI5
TPR_COPA_B
Beta-prop_WDR75_1st
Clathrin
Rax2
Beta-prop_ELP1_2nd
Motif
Other DBs
NCBI-GeneID:
111935830
NCBI-ProteinID:
XP_023792139
UniProt:
A0A8C0VKK0
LinkDB
All DBs
Position
14
AA seq
1453 aa
AA seq
DB search
MAVYVDHRTDAPDSIASSSHIAWHPLHPLLAVASISTAAGGCVDIYLEQGEHVPDCRIER
SFQVTLLAWHPSRPILASGWETGEVLILNKQDKEQHTVPPNHSTKITALSWSTSGTCLAS
GDGYGVLFLWKMDHRGRVQGPALLKQEYGKCLCHCVFRPPLPGEDFVQLAKAAVSGDEKA
LDKFNWEKAGIGPPLKTTVQEGLSLFIALTDGSVHYVNEKGKSRQVLSTDSLVQKLLLLE
ERDVLLVITENLQLSLHSVSPEGEAEELMKVKLSGKTGHSADMILIDHSLIVTALGETVI
RFWDLDRDENYVLSLDMQFGFEREECINCVSYCSAKAILAAGTSKGRVAMWKKAAGSDQS
TWALEGKEKWKFQASTELEGNVTQIKWGSRKNLLAVNNISSVVILSEQAMLAHFHQQVAV
VQVSPNLFNVTIFSAGITHSLRVDMNANGVFATKDAVVFWNGKQVAVFECSGDAFRSAGS
FLCDSPVLSVHGENLYTVEPYRIQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTD
QTQLKIFDLSRREAKVHCNSKSLSKLLPGCRDIVSVKCNANGSKVSILVSRADGNIDSKI
YFYDVEMDQVTLFDFKAEQGHGRENLSAGQGTGKFVVEYPELHSYIPARHFWDQSEPRLF
VCEAIPETGFQPSDQKENQTEGTVDVWIISFFSTEEHGLLLQDSFPLPSSYQVLLGIEVP
HYYFAKKLGEAEKAASESGSGTVSQMVARRPMRDFIGLGDCDSTTQDAMLNFSYYLTAGD
MDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGHMGHARGAKALREAEQEPEQKA
RVAVLAIQLGMLEDAERLYKACKRYDLLNKFYQASNQWQKAIETAEAHDRVHLRTTHYNY
AKHLEATGQQCLALTHYEESDTHRFEVPRMLSEDLQALENYINKMKDKSLWKWWAQYLES
QSDMESALKYYALAQDYFSLVRVHCFQGNIQKAAEIANETGNGAASYHLARQYESQEDIK
QAVHFYSRAQAFNNAIRLCKANNLDDQLMNLALLSSPEDMIEAACYYEEKGDQMDRAVML
YHKAGHFSKALELAFATQQFGALQLIAEDLNEKSDPALLARCSGFFIEHAQYEKALELLL
TAKKYHEALQLCLEQNLTITEELAEKMTVSKESQDLSEESRRELLEQIADCCMRQGNYHM
ATKKYTQAGNKLKAMRALLKSGDTEKIIFFAGVSRQREIYIMAANYLQSLDWRKDAKIIA
NIISFYTKGGALDLLAGFYDACAQVEIDEYQNYEKAHRALTEAYKCLSKAKARSPVEQES
KLRHLQSRMSLMKRFIHAQRVYPEDTEEAVRQCELLLAEQDFDNAIRYGDVLGFLVQHYA
QVEEFHTAYRYLEEMQKRIPASNLSYYVSPQTMETVHQGAGVPMSQALSPAHTGHGNTDN
KEEEEVADEVEDP
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggctgtatatgtggatcatcgaacagatgctcctgactccattgcctcctcttcccat
atagcctggcacccacttcatccactcctggcagttgcttccatcagcacagcagctggg
ggctgtgtggatatctacctggaacagggagaacatgtgcctgattgccgtattgagaga
agctttcaggtcacattacttgcgtggcacccttccagacccattctggcatcaggatgg
gagaccggagaagttctgatactgaacaaacaagacaaggagcagcacactgtaccccca
aatcacagcaccaaaatcacagccctgagctggagtacaagtggtacctgccttgcatct
ggggatggatatggtgtcttgtttctgtggaaaatggaccatcgaggcagagtccagggt
cctgccctgcttaagcaggaatatgggaaatgcttgtgtcattgtgtctttcggccaccc
cttcctggcgaagactttgtgcagctggcaaaagcagctgtgagtggtgatgagaaagcc
ttggataagtttaactgggagaaagctggaataggaccacctctgaaaacgacagtccaa
gaaggtctctccctctttatcgctttgacagatggttctgtgcactatgtgaatgagaaa
gggaagtcaaggcaggtattgtccacggacagtctggtccaaaagctcctgttgctagag
gagagagatgttttacttgtaataacagagaatctgcagttgtccttacactcagtttct
cccgagggagaggcagaagagctcatgaaggtgaagttgagtgggaagactggtcattct
gcagacatgattttaatagaccatagtctgattgttacagcattaggtgagacagtcatc
aggttctgggatttggatcgagatgagaactatgtgctctccctagacatgcaattcggc
tttgagagggaagaatgtattaattgtgtgtcttactgcagtgctaaagctatcttggca
gctggaactagcaagggtagagtcgcgatgtggaagaaagcagcgggatctgatcagagc
acatgggctttggagggcaaggagaagtggaagttccaggcatccacagaacttgaagga
aatgtcactcagataaagtggggatcccgaaaaaacctgctggcagtgaacaacatcagc
tctgtggtgatcctcagtgagcaggccatgttggcacattttcatcagcaggtggctgtg
gtacaggtgtctcccaacctcttcaatgtgacaatcttcagcgcaggaatcactcacagc
cttcgtgttgatatgaatgctaatggagtctttgctactaaggatgctgtagttttctgg
aatgggaagcaagtggctgtctttgagtgctcaggagatgcctttagaagtgcaggctct
ttcctttgtgactctccagttctgtctgttcatggagaaaatctgtacacagtggaaccg
tatcggatccaggtccgcacctggcagggcacagttaaacagttgctggtgttctccgaa
gcagaggggaatccttgcctcctggatgtctgtgggaatttcctggctgtgggaactgat
cagactcagttgaaaatctttgatctctcacgcagagaggcaaaagtgcactgcaacagc
aagagtttatctaagctgctccctggctgcagagatattgtgtctgtgaagtgcaatgct
aatggcagcaaagtcagcatccttgtcagcagggcagatgggaacatcgattccaagatc
tatttctatgatgttgaaatggaccaggttacgctctttgatttcaaggctgaacaggga
catggtagagagaacctttctgctggacaaggcactggcaagtttgtagtggagtatcca
gagttgcacagttacatccctgctcgccatttttgggaccagagtgaaccaagacttttt
gtatgtgaagcaattcctgaaacaggcttccaaccttctgaccaaaaggaaaaccagact
gagggcacagtggatgtttggattatatccttcttcagcactgaagagcatggccttttg
ctgcaagacagctttccattgccttcatcctaccaggttcttctgggcatagaggtgcca
cattattactttgcaaaaaagctgggagaagctgagaaggcagcatcagagtctggctca
ggaacagtctctcaaatggttgcaagaagacccatgagagatttcattggactgggggac
tgtgatagcaccacccaggatgccatgctgaacttcagctactatctgactgctggagac
atggatgaggccttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatg
gctcgcatgtgtgtgaagactcagaggctcgatgttgccaaaatttgcctggggcacatg
ggtcatgcaagaggagccaaggcactgcgggaggctgagcaagagccagagcagaaggcc
agggtggctgtgctggccatccagctgggcatgctggaggatgcagagcggctgtacaag
gcttgcaaacggtatgacctcttgaacaagttctaccaagcctccaaccagtggcagaaa
gccatcgaaacggctgaggctcatgaccgggttcacctgcgcaccacccactacaactac
gcgaagcacctggaggcaactgggcagcagtgcctggcactcacccactatgaagagtca
gacacacacaggttcgaggtacctcgaatgctctctgaagacttacaagccctggagaac
tacatcaacaagatgaaagacaagagcctgtggaagtggtgggcacagtacttggagagc
cagtcagacatggaatctgcattaaaatactatgcactggctcaggattatttttcccta
gtccgtgtccactgctttcaaggcaacattcaaaaggctgctgaaatagcaaatgaaacg
gggaatggggcagcctcctatcacctggcacgccagtacgagagtcaggaggacatcaag
caggctgtgcacttctacagccgggcccaggcgttcaacaacgccatccgcttgtgcaag
gcgaataatttagatgatcagctgatgaacctggctctcctgagctcaccagaagacatg
atagaggcagcctgctattatgaggaaaagggggatcaaatggacagagctgttatgtta
taccacaaggcaggacacttctccaaagccctggagctggcctttgccacgcagcagttt
ggggccctacagctcattgctgaagacctgaatgagaagtctgacccagccctgctcgcc
cgctgctctgggttcttcattgaacatgctcagtatgagaaggcactggagctgctgctc
acagccaagaagtaccatgaagctctgcagctgtgccttgagcagaatctgaccatcact
gaggagctggctgagaagatgacagtctccaaggagtcccaggatctctccgaggagtcc
cggagggagctgctggagcaaattgccgactgctgcatgagacaaggcaactaccacatg
gccaccaagaaatacacacaagcaggaaacaagttaaaggccatgagggcattgctgaaa
tctggagatactgagaaaattatcttctttgcgggagtttccagacagagagagatttat
atcatggcagccaactacctgcagtcacttgactggcgtaaagatgcaaagattattgca
aatatcatcagcttctacaccaaaggaggggcccttgatctcctggcaggtttctatgat
gcatgtgctcaggttgagatcgatgagtatcagaattatgaaaaagcccacagagcactc
acagaagcatacaagtgcctttccaaagcaaaggccagaagccctgtggaacaggaaagc
aaactcagacacctgcagagcaggatgagtctgatgaagcggttcatccatgctcagaga
gtttaccctgaagacactgaagaagcagtcaggcagtgcgaactgctcctggctgaacag
gactttgacaatgccatccggtatggcgatgtcctgggatttttggttcagcattatgca
caagtggaggaattccatacagcttatcgctacctggaagagatgcagaagagaattcca
gcctcaaatctgagctactatgtgtccccacagaccatggagaccgtgcaccaaggagct
ggtgttcccatgagccaagccctgtccccagcacacactggccatggtaacacagacaac
aaggaggaggaagaagtggctgatgaagtggaggacccctga
DBGET
integrated database retrieval system
