Cyanistes caeruleus (blue tit): 111935936
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Entry
111935936 CDS
T05602
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
111935936 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ccae01001
]
111935936 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccae04054
]
111935936 (CIITA)
Enzymes [BR:
ccae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
111935936 (CIITA)
Protein kinases [BR:
ccae01001
]
Serine/threonine kinases: Other
TAF1 family
111935936 (CIITA)
Pattern recognition receptors [BR:
ccae04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111935936 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_9
LRR_8
LRR_14
NB-ARC
nSTAND_NTPase5
NPHP3_N
RsgA_GTPase
nSTAND3
AAA_19
Motif
Other DBs
NCBI-GeneID:
111935936
NCBI-ProteinID:
XP_023792373
LinkDB
All DBs
Position
14
AA seq
1146 aa
AA seq
DB search
MNLVFKSLFVLTPGRHGKTKTQTMDSVFVPENGYLDLLHSDIDPLHLCTFFDPKLPGDEE
GDFSTDLEVDASNYEQLNNVDFPYENGDGFYPCSNTMDAYAKIAELVEYVLKDQQEKQVE
DIFAGNLILDDIAAENTEKFPDIKMQTCLKRTFLGSAAEGYCDVSEPKYKKIAEAPAASA
GNGSFFAMPLNSHPVSCTSLTNQHMSFSAPAAQGLERNLIIPGLSEPLTSECLLASVKEY
QENQNLASPPQQIFNFVLENSTSDVIVYPVLASSVETFISPSFPVNLCAQQTYAASPGIP
DAAADKLAHLETFQEVQDSIISSEEPFKRPEQVETFCSSLKDYFRDTCKSVTMEREVNLD
HLFIDGTLVQPQTETKTGKNSAKAMEKELITCSLQEKEKTAIDRSQIFQIPQRKDLETKV
IVVLGKAGMGKSILVQKICQDWSSGEFSQFEFVFWFDCKQINLPEKRYSLKELLLEFFVK
PQEGSKEIFEYILQNPAKVLLIFDGFKGLHDHENFPRCSASQPEKDLCSIKELLSGLIQK
KLLNGCTLLFTARPKDKLYQYASKVDKTIEIVGFSSQQRELYITKYFEESSYCDSALKLI
KEREYLFSHCYSPAMCRFVCFLCEAVLEMGEKSLPSTLTEVFLKFFKQKIMLMQTDVTTT
QNQESLATLARIAWCLGEKHQSAMKSDLLPSKEVKEFALKYGFVLPFAFPRHSDSEEEEF
GSTFSDFVIQNFLCALHLLLAEELKDKNLTKYLSFLSKKKKPYNWLDLMPRFLVGLMFLQ
DDLYLCSLSNVDAKQSTKKQKTLLKYIRRLQINTLCPERLLELFHCVYETQNNYLLQHVA
LRLEPDLSFLGMVLTPPDVHVLLSILKRSRKEFSLDLRNSSIDMQGLQALVSLRNVTSFR
ASLSDTVRLWKSLEQTKEYELLKASTEKFVLDPFKAKTMKDISDLSDLVEMQKMMNCVQE
ASGCTSYEIPAIRNLRKLEFALGPACGLQGLLKLVKILAAFPSLRHLDLDALSENGIGDE
GAKSLSEVFPTLTSLETLNLSQNKITDLGAENLATALPSLSSLKTLSLYNNNICDFGAEN
LAKALPAMTSLRVLDVQYNKITGVGAQQLTDSLRKCPHIKNLVMWNPTIPYGVLEHLHQL
DSRISV
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgaacttggttttcaaaagtttgtttgtcttaacaccaggtaggcatggcaagacaaag
acacaaaccatggattcagtatttgtgcctgaaaatggctaccttgatttactgcacagt
gatattgatccattgcatctgtgtactttctttgatcctaagttacctggagatgaagaa
ggtgacttctctacagatcttgaagttgatgccagcaactatgaacagttaaataatgtg
gatttcccatatgaaaatggagatggcttctacccctgttccaacaccatggatgcttat
gctaaaatcgctgaattagtagaatatgtgctcaaggatcagcaggagaagcaggtcgaa
gacatttttgcagggaaccttattttggatgacattgctgctgaaaacactgagaaattt
cctgacataaagatgcagacatgtcttaaacgaactttcttaggctctgcggcagagggt
tactgtgatgtttcagaacccaaatataagaaaatcgcagaagcccctgcagcgtctgca
gggaatggcagtttctttgctatgcctctcaacagccacccagtgagctgcacctcccta
actaaccagcacatgtccttttctgctcctgctgcccaggggctggaaagaaacctcata
attcctggattgtcagaacctttgacctcagagtgtctactagccagtgtgaaggagtac
caagagaatcaaaacttggcaagtcctcctcagcagatatttaactttgttcttgaaaat
agcacatctgatgttatagtatatccagtgctggcatcttctgtggaaacattcatatct
ccaagttttccagttaatttatgtgcacaacaaacgtatgccgcaagccccggaattcca
gatgcagcagcagacaaattagcacatttagagacatttcaagaagttcaagattccata
atttcttctgaagaacctttcaaaagaccagagcaagtggaaaccttctgttcgtcactt
aaagattatttccgagacacgtgcaaatctgtgaccatggaacgggaagtaaatctggat
cacctgttcattgatgggacacttgttcaacctcaaactgaaacaaagactggaaaaaat
agtgcaaaagcaatggaaaaggagctgataacttgcagcctgcaagagaaggaaaagaca
gccattgatagaagccaaatatttcaaatcccacaacgtaaagacttagagactaaagtg
attgtggtgctgggtaaagcaggaatgggcaaaagcattctggttcagaagatctgccag
gactggtccagtggagagttttctcagtttgaatttgtattttggtttgactgcaaacaa
ataaacttgcctgagaaacgatacagcctgaaggaactgctgcttgaattttttgtaaaa
cctcaagagggaagcaaagagatctttgagtatatattgcaaaatcctgctaaagtcctt
ctgatttttgatgggtttaaaggattgcatgatcatgagaattttcctcgttgctcagcc
agccagcctgaaaaggatttgtgcagtataaaggagctgctttcaggactcatccaaaag
aagttactcaatggttgtactttattatttacagcaaggccaaaagacaaactgtaccag
tatgcatccaaagtggataagactattgaaatagtaggattttcctctcagcagagagaa
ttgtacataaccaaatattttgaagaatcatcctactgtgatagtgcactgaaattaatc
aaagagcgtgagtacttgttcagtcattgttacagccctgctatgtgtagatttgtttgt
tttctctgtgaggcagtgcttgaaatgggagagaaaagtcttccttcaactcttactgaa
gtcttcctgaaattttttaagcagaagataatgcttatgcaaacagatgttacaaccaca
caaaatcaagagagtcttgctaccctagcccgtatagcctggtgtcttggagaaaagcac
caaagtgccatgaaaagtgatcttcttccttctaaggaagttaaagagtttgctctgaag
tatggatttgtcctgccatttgcattccccagacattcagatagtgaagaagaggaattt
gggagcacattctctgattttgtcattcagaatttcttgtgtgcactccaccttttgtta
gcagaagaactcaaggataaaaatctaacaaagtacctgtcttttctatccaagaagaaa
aaaccttataactggttagatttgatgcctcgatttttggttggtttgatgtttctccag
gatgacctctatttgtgctctctttccaatgtggatgcaaaacaatcaaccaagaaacag
aagacactcttgaaatacattagaaggctgcagattaatactctctgtccagagaggttg
ctggagctttttcattgtgtttatgaaacacagaacaattatcttctgcagcatgtggcc
ttaagactcgaaccagacttgtcttttctgggcatggttcttactccacctgatgtccat
gtactgctctctattttgaaaaggtcaagaaaagagttttccttggatttgcgaaacagc
agcattgacatgcaagggctgcaagccttggtcagcctaaggaacgtgacatcattcagg
gcttccctcagtgacacagtcaggctctggaaatctttagaacagacaaaagaatatgaa
ctgctgaaagcatccacagaaaaatttgttcttgatccctttaaggcaaagacaatgaaa
gacatcagtgacctctccgaccttgtagagatgcagaagatgatgaattgtgttcaagaa
gcatctggttgcaccagctatgaaattcctgccattagaaacctcagaaaactcgaattt
gcgctgggtccagcatgtggcctccaaggattgctaaaactcgtgaaaatccttgcagca
tttccatcacttcggcatttagaccttgatgctctgagtgaaaatggcataggagatgaa
ggagcaaagagtctatctgaagtctttccaaccctgacatcgttggaaacattaaattta
tcacagaataaaataacagatctgggtgcagagaacctcgctacagctctcccttccttg
tcttccttaaaaacactaagcttgtacaataataacatttgtgattttggagcagaaaat
ctggcaaaggctcttcctgcaatgacatctttaagagtgctagatgttcagtataacaaa
ataactggtgttggagcccagcagctgacagacagcctacgaaaatgtccccatataaag
aacttggtgatgtggaatcccaccattccctatggagttcttgaacaccttcaccagctg
gactccaggatcagtgtgtag
DBGET
integrated database retrieval system
