Cyanistes caeruleus (blue tit): 111936027
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Entry
111936027 CDS
T05602
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccae01002
]
111936027 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111936027 (USP42)
Enzymes [BR:
ccae01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
111936027 (USP42)
Peptidases and inhibitors [BR:
ccae01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
111936027 (USP42)
Ubiquitin system [BR:
ccae04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
111936027 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
111936027
NCBI-ProteinID:
XP_023792512
LinkDB
All DBs
Position
14
AA seq
1332 aa
AA seq
DB search
MTIVNKPKSSKSKKSSSRRSDKSMKPRTKKMTSRTASLGRVPPTEESNKVSVDKGPGGHI
YCRSSQKSKPFAQRDLVVNDGIAPPQRILFPPEKICMDWQQTQSVGVGLQNLGNTCFLNS
TLQCLTYTPPLANYMLSLEHTKSCHVEGFCMMCTMESHINQVLCCSNNAIKPTSVINGLK
RIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTLIYQIFGGYLRSRVKC
LNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSYKCSKCKKMVPASKRY
TIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIGEPLIYALYAVLVHSG
FNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFYIRRYDLTLGERAFYL
PAPSYPRSFLGQRGANSKQAAFMGPRLPPHMIKSSSRINGNGPLKEDPSTVGVAVKRPSS
APPTACVQNWAISRPPMTDPSKTQKITISIHNKLPTRQAVSQAECPSSAVEEEDLKPIPS
ATITNSSAAEPTSNLSTVSVATNVSKQEVPDEIFVEPAVNGNPKLCSDNMVPYGAEPSGK
SEESKGLFKRNCNVISSNGILIGKVVRTLHNSHSSCQNAEERSQHELPKIDSLNGAISLD
NEYKENGLKLDDSTCQVQPVKPSEIFFSKANGVLETKGDDLSPDPQGILDSLTYSQLNSL
SEEKSVSGSQKSSDNDGVMETVVMEALFAYEESRKVPSNFSCEVEKLFTQSDSETIFTKE
EVAESIITKADNAHLNINGQHKVRKKSLDTEGEFLGQCESEDIRDKDKLRRSKEPELISK
ENSLYIKGSPESKEKLGQTSSIKPDIECSSKKLASLDITDKCQDTKDISNNYVEVPPVND
SSITKLDKVLESQFSRADEGLGNKICEDDDKHMKKNKKKIHDSKRTDKEHYRRKRENSDT
EEKERQTRNKPDDHSHRRRSSHSVETNKQSRHKQEYCSESKYRSSHNERNSPSNGRSSGK
YSRYRSRSRERTDPDRNRYYYSKGDRPWIRERYYQDEPRRWEKCRYYNDYYSSHGTRDGR
ERRSSRCDKDYDKLSQSYSRSHKDYHCKSRWAHSTLSREEDVHHFSSHRANFHHCSVPQQ
HSEKYSRERHALPPVSAHSNFEDSSRENEKEKLRNGKRKYSHQEESGSDIEKKCRKTDDQ
RNKKYKKVKKKKKSKDKHREKDYKLYDLDCSVLHFDNDNRKHKKKKKKKKHDRKDLLEYL
DPRFQKKTWEKKEESRPPDDHLCEQYRNQGTKQPYKEEKPSGAGDSKKYSSMASTEYVRD
VELTDESLQYSD
NT seq
3999 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttaacaagccaaaatcttcaaagtctaaaaaatcttcctcaagacggtct
gacaaatctatgaaaccccgtactaaaaaaatgacgtcacgcactgcaagtttgggccgg
gtaccccctacagaagaatcaaacaaagtctctgtggacaaaggtcctggggggcatatt
tattgtagatcatctcaaaaatcaaagccttttgcccaaagagatctagttgttaatgat
gggattgctccgccacaaagaattctttttccgcctgagaaaatctgtatggattggcaa
caaacacaaagtgttggagttggactgcagaaccttggcaacacatgtttccttaattct
actctccagtgtttgacctacacacctcctcttgccaattacatgctttcacttgagcac
accaagtcatgtcacgtagaaggattctgtatgatgtgcacaatggaaagtcacatcaac
caggtcctgtgttgctctaataatgccatcaaacctacatctgttatcaatggccttaaa
agaataggaaaacatttccattttggcagtcaagaggatgcacatgaattcttatgcttc
actgttgatgctttgcagaaagcttgcttgaatgggagcaccaaattagacagatcttct
caagccaccacacttatttatcaaatatttggaggatatctaagatctcgagtaaagtgc
ttgaactgcaaagcggtgtcggatacgtacgagccatttctcgacgttactttggacata
aaggcagttacatccgtcaccagagctctagaacaatttgtgaaaccggaacagctggat
ggtgaaaatagctataaatgtagcaagtgtaaaaagatggttccagcctcaaagagatac
acgatacatcgctcttccaatgttctcacaatatcactgaaaagatttgcaaattttaca
ggtggaaagatcaacaaggatgtaaaataccctgaatatttggatcttcgagcatatatg
tcccaatctattggagaacccctcatctatgctttatatgcagttcttgtacatagtggc
ttcaactgtaatgctggacattatctctgcttcataaaggctggtaatggactttggtac
cgaatgaatgatgcctcagtagagctttctgatatcaaaacagttctcaatcagcaagct
tacgtgcttttttatatcaggcgctacgatttgacgctgggggagcgagccttttacctg
cccgcgccctcctacccccgctccttcctcggccagcgcggagccaacagcaagcaggct
gcattcatgggaccacggctgcctcctcacatgattaagagttcaagtcgtataaatgga
aatggacccttaaaagaggatcccagtactgtgggtgttgctgtaaaaaggccatcttca
gctccaccaacagcttgtgttcaaaactgggcaatttccaggcctccaatgacagaccct
tccaaaacacagaagatcacgatcagtattcacaacaagctgcccacacggcaggcggtg
tcgcaggcagagtgtccgagcagcgctgtggaggaggaggatctgaagcccattccttca
gccacaattacaaactcttccgcagcagagcctacctcaaacctctccacagtgtcagtt
gctactaatgtctccaagcaggaggttcctgatgaaatctttgttgagccagcagtaaat
ggaaaccccaagctctgttctgacaacatggtcccttacggtgcagaaccttcaggaaaa
tccgaggagtcaaagggcttgttcaaaaggaattgcaacgtcatatcttccaatggaatt
ctgattgggaaggtggtccgtacactgcataattcccattcatcctgtcagaatgctgaa
gaaagatcccagcatgagctgccaaaaattgattccctaaatggtgctattagtttagat
aatgaatataaagaaaatggactgaaacttgatgattccacttgccaagtccaacccgtt
aaaccttctgagattttcttctctaaagcaaatggagtgcttgaaacgaagggggatgat
ttgtcaccagatcctcaaggtatcttagactctcttacgtacagccagttgaacagcttg
tcagaagaaaaaagtgtctctggatctcagaaatcttctgacaatgatggagttatggaa
actgtggtgatggaagcactgtttgcctatgaagaatccaggaaggttccttccaacttt
agctgtgaggttgagaaactttttactcaatcagattctgaaaccatttttaccaaagaa
gaagttgctgaaagtattataacaaaagctgataatgcacatctcaatatcaatggtcag
cacaaggttaggaaaaaatccttggatactgaaggtgaattccttgggcagtgtgagtct
gaagacatcagagataaagacaaactaagaagatcaaaagaacctgaactcatttcaaaa
gaaaattctttgtacatcaaagggtctcctgagagcaaagagaaattagggcaaacttcc
tctataaagcctgacattgaatgtagttctaaaaaacttgcatctctagatattacagat
aaatgccaagatacaaaggacatttctaataactatgtagaagtaccacccgttaatgac
tcttctattacaaagctggataaagtattggaaagtcaattttctagagcagatgaggga
ctgggtaataaaatatgtgaagatgatgataaacatatgaaaaaaaataagaaaaaaatc
catgactctaaaaggactgacaaagagcattaccggagaaagagagagaactcggacact
gaggagaaggagagacaaaccagaaacaaaccagatgatcattcccacaggaggaggagc
tctcacagcgtggaaacaaacaagcaaagccgtcataagcaggagtattgcagtgagagc
aagtacagatcctcccacaacgaaagaaacagtcccagtaatggcaggagctcaggaaaa
tattctcgttacagatcccgaagcagagaaaggacagatccggacaggaataggtattat
tattccaaaggagacagaccttggattagagaaagatactatcaagatgaaccacggaga
tgggaaaaatgcagatactacaatgattattattcctcccatggaacaagggatggtagg
gagaggaggtcctctcgttgtgataaagactatgacaaactgagccaatcttacagcagg
tcacacaaggattatcattgcaaaagcagatgggctcacagcacactctcccgagaggag
gatgtgcatcacttcagcagccacagagcaaacttccaccattgttcagtacctcagcag
cactcggaaaaatactctcgtgagaggcacgcacttcctccagtgtcagctcactcaaat
tttgaggactcttcccgggaaaatgaaaaagaaaaactaagaaatggcaaaagaaaatac
tcccaccaagaagaaagtggaagtgacatagaaaagaaatgccgaaagacagatgaccaa
agaaacaaaaagtataagaaggtcaagaagaaaaagaagtccaaagataaacatcgagag
aaggattacaaactttatgatttggattgctcagtgctccactttgacaatgacaatcgc
aaacataagaaaaagaagaaaaagaagaagcacgacaggaaagacttattggaatattta
gatcctcgtttccagaagaagacatgggagaagaaggaagaatcccgtcctccagatgac
catttatgtgagcaatacagaaaccagggcactaaacaaccctacaaggaagagaagcct
tctggtgcaggtgacagcaagaaatacagctccatggcatccactgagtatgtcagagat
gtggagctgactgatgaaagccttcaatactcagactga
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integrated database retrieval system
