Cyanistes caeruleus (blue tit): 111936028
Help
Entry
111936028 CDS
T05602
Symbol
PMS2
Name
(RefSeq) LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03430
Mismatch repair
ccae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111936028 (PMS2)
03460 Fanconi anemia pathway
111936028 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111936028 (PMS2)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
111936028 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
DUF5741
Motif
Other DBs
NCBI-GeneID:
111936028
NCBI-ProteinID:
XP_023792513
LinkDB
All DBs
Position
14
AA seq
689 aa
AA seq
DB search
MVQLLQAYCIVSKGVRINCTNQVGQGKKSCVISTAGSPSLKENIGAVFGQKQLQSLIPFV
QLPPSEAVCEEYRLNPDDMPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVV
KIVNEVYHLHNKHQYPFVVLNIGVDSECVDINVTPDKRQILLQEEKFLLAILKTSLLEMF
GSDVNKLNVNQKLLDVAGNLKKTLPEETEKPQAEVLSDSETENPSGEGKRIMTLARLRES
FSLHQATESNFQSSKKVKQQHSFPRQRLLDTTGSTVKIQKAILTKEAESCHKSDLKVSVP
RRHLRKLEDTADSGFCSISESDAGCSTPEAGSFINSESAINSEEEFCSTEEQMQKECLKT
AGCSKKSLDCDVQVLGTEPKLDRVNDWTDQNKFSQEANSCSPRVKRFKSRNFKSKADDSK
AGKYPEMKNTSVDVLVEVKKKIVPLEFSMKVLAEKVKKVIQQQQKNTETENYRRFKAKIS
PGDNKVAEDELRKEISKEMFAKMEXHWPVQFRVYNSKVESDLFIIDQHATDEKYNFEMLQ
QHTVLQGQKLIVPQNLNLTAVNETVLIENLEIFRKNGFDFIINENAPVTQRVKLISLPTS
KNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMRKLITH
MGEIEHPWNCPHGRPTMRHIVSLDLITPE
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggtccagctgttacaggcctactgtattgtttccaaaggagtgcggattaactgcact
aatcaagttggccaagggaaaaaaagctgtgtgatatccactgctggaagtcccagttta
aaggagaacattggagcagtatttggacaaaaacagttgcagagccttattccttttgtt
cagcttcctcctagtgaagctgtttgtgaagaatatcgactcaaccctgatgacatgcca
caaaatctttatagtattactggcttcatttctcgttgtgatcacggtgttgggaggagt
acaacagacagacagttcttctttatcaatcaacgtccctgcgatccagcaaaggttgtg
aagattgtgaatgaagtttatcacttacacaataaacaccagtatccatttgttgtcctt
aacattggggtagattctgagtgtgttgacatcaacgtaactcctgacaaaaggcaaatt
ttacttcaggaggaaaagtttttattagcaattctaaagacttctctgctggagatgttt
ggtagtgatgttaacaaactgaatgtcaatcagaaacttctggatgttgcaggtaacttg
aagaagacacttcctgaagagacagaaaagcctcaggcagaagtgctgtctgactctgag
actgaaaatccaagtggtgaaggcaaaagaataatgactcttgccagattaagggagtca
ttctctctccatcaagctacagaaagtaattttcaaagctctaaaaaggtaaaacagcag
cacagtttccctagacaaaggttactcgataccactgggagtactgtaaagattcaaaag
gctatcttgactaaggaggctgagagttgtcataagtcggacttaaaggtgtcagttcca
aggagacacttgagaaaattagaagatactgcagattctgggttctgtagcatttctgag
tcagatgctggttgtagtacaccagaagctggaagcttcatcaacagtgaaagtgcaatt
aattctgaagaagaattctgtagcacagaagaacagatgcagaaggaatgtcttaaaact
gctggatgtagtaagaagtcattggactgtgatgttcaggtcttgggcactgaacccaag
ctagatcgagtgaatgactggactgatcaaaacaagttctctcaagaagccaatagttgt
tccccaagagtaaaacgttttaaaagcagaaactttaaaagtaaagcagatgattcaaag
gcgggtaaatatcctgaaatgaagaacactagtgttgatgtactggtggaagttaaaaag
aaaattgtgcctcttgaattctctatgaaggttttggcagaaaaggtaaaaaaagtaata
cagcaacaacagaaaaacacagaaactgaaaattacagaagatttaaagcaaaaattagt
cctggggacaataaagtagcagaagatgaattaagaaaagagataagtaaagaaatgttt
gcaaagatggaanatcattggccagttcaatttagggtttataatagcaaagttgaatct
gatcttttcataattgaccaacatgctactgatgagaaatacaactttgagatgttgcaa
caacacactgttctccaaggtcagaagctgatagtgcctcaaaatctcaatctaacagca
gtaaatgaaactgtattgattgaaaacctagaaatattcagaaaaaatggctttgatttt
atcataaatgaaaatgctcctgtaactcaaagagttaaattgatatcattgccaacaagc
aaaaactggacttttggtccacaagacatagatgagctgatcttcatgttgagtgactgc
cctggagtgatgtgcaggccctccagggtcagacagatgtttgcttctcgagcttgcagg
aagtctgtgatgattggaactgcactgaatgtgcaggaaatgagaaaactgatcacccat
atgggtgagattgaacatccctggaactgcccccatggaaggcctactatgagacatata
gtcagtttagacttgattacaccagaataa
DBGET
integrated database retrieval system
