Cyanistes caeruleus (blue tit): 111936200
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Entry
111936200 CDS
T05602
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111936200 (RBBP6)
Enzymes [BR:
ccae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111936200 (RBBP6)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
U-box type E3
111936200 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111936200
NCBI-ProteinID:
XP_023792788
UniProt:
A0A8C0VTR1
LinkDB
All DBs
Position
14
AA seq
1788 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQLPP
PPPPPPPPPLMRQTITRTLQPLMRPALARQQDPLMIPLASLASRSALSSLGPGPSMAAGL
PVNPSSVVVSDLPPAVSLSLREKPDGPFRDADAVLPPALMTAAELSKSSPLSITSLLEEK
GYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAPS
LPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAP
ANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKE
LMEYKKIQKERRRSFSRSKSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYS
RSPPYQRRGKGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPVFRGQSPTKRTVPQG
EAEREYFNRYREVPPYDMKAYYGRSVDFRDPFEKERYREWERNYREWYEKFYKGYAVGAQ
PRPPVNRENFSPERFGPPGTRRENSPYARGRREEYPAGQSHRNRNVAGNYPEKPGRESHG
IKDPTKSKEKEVENPLGDGKGNKHKKHRKRRKGDENEGFPNVELLEGARKPREPVPTEDA
KTDSLFMLPSRDDATPVRDEPMEADSIAFKPVSEKEKKEKDKPKAKIEKTKRKVEVAAAP
KKDNVAKPAKASQEKVDPDREKSPRTEPPVKKAKEELPKTDSVKTSSSQKDEKALGTPRK
AHPKVTKDHPETRPAKEEKAKKEHPKEAKAEKPSSKEEKSKKPAEKSKLSDAKLEKRKRK
AEEKADKEHEATSAKASKPESAELKTSPKGKAEPEGEKGERTPEKDKAAFLNNPSKKIKL
NRETGKKIVSGENVPPGKEAVEKPEPSSSKVKAEKAKGKARRKVAAADGASSTLVDYTST
SSTGGSPVRKPEEKPDTKRTVIKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFESEEE
DVKSTTQVPPAVGKPTSVVKPVSAKAPNPLKHIEKETEPLEKAQKAAKEASYESTQHDAK
SSKSSLSSEKGKTKDRDHSLSDKDSSEKRKSSVQPEKEHSERAAEQGNGKTVSQSSKDGR
SSEKHDSGRGSAAKDFTPNRDKKSDHEGSREHSSSKRRDEKSESARRKDSPSRVRDSTAA
QKSKPREERVEPPKKGPAEAKRSSYSPPRERKAAEHKAVHDPKRPAEEHKPPDKNPGKEK
EKEKEKEKHVPEVKGNKEKEPAGNKAPVKQDSPEIKVEKENVAGQADKGAAKPKAPVSSA
ARLSSDLTRETDEAAFVPDYNESDSESNVSAKDEEAAGKTPKEAKEKAVEKLKEEAAAPA
PAEQPEVGRSQSQSSPSVSRSRSHSPSESQTRSHSSSASSGESQDSKKKKKKKEKKKHKK
HKKHKKHKKHVGNETELEKSQKHKHKKKKSKKSKDKEKDDQKVKSVTT
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacaccgatgat
agcgctctgattcccaagaactcatcagtgattgtgaggagaatccccattggaggagtt
aaagctaccagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacctgtggggccacctccaccctcctacacctgttttcgctgtggcaaacct
gggcactacataaagaactgtccaacgaatggggacaaaaacttcgagtctgttcccaga
attaaaaagagcacgggaattccaagaagttttatgatggaagtgaaggaccccaacacg
aagggtgccatgctgaccaacactgggaaatacgcaatcccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcctca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgact
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaactgcg
ctgctggagtctgaggaacacacctgccctacctgccatcagacagatgtttctcctgat
gctttaatcgccaacaagtttctgcgccaggctgtcaacaacttcaaaaatgaaaccggc
tacacaaaaaggctccgtaagattcagcagcagcaacagcagcagcagcagctgccacca
ccaccgccacccccgccgccgccgcccctgatgcggcaaacaataacgcgcaccctgcag
ccgctgatgcggccggccctggcccggcagcaggacccgctcatgatcccgctggcctcc
ctggcttcccgctccgccctctcgtccctgggccccgggccgtccatggcagccgggctg
cccgtcaatccgtcttctgtggttgtttctgatctccctccagcagtgtccctctctctc
cgtgaaaagccggatggaccttttcgtgatgccgatgctgttttgcctcctgctctgatg
actgctgctgagctttccaaatcttcccctttgtcaatcaccagtttgctggaagagaag
ggctatcaggttcctgtactgagacaaccagcgataccaagtcttctgggccctcaagga
caatcaatacccacaactggtcatccaatgagagctggtgcacttcgcaggccaggctgg
gaactttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggccccatca
ctgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctccacca
ccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagtttcca
cctgggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagctcct
gcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacaccatc
ccaacgacacaagcacctcctctctctagggaggagttttacagagagcaacggaggctt
aaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaaggaa
ttgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccaggtccaagtct
ccctatagtgcttcatcttactctagaagctcgtacacctactccaagtcccgctcaggt
tcgtcacgctcccgctcctactcgcgctcctttagccgctcccactcccgctcctactcc
cggtcgccgccgtaccagagacgaggcaaagggaagagtcggaactaccgctcgcggtcc
cgctcgcacggctaccaccgctcccgctcccgctcgcccccgtacaggcgctaccactcc
cgctccaggtcccccgtgttccggggccagtcccccaccaaacggacggtcccgcagggc
gaggccgagcgcgagtacttcaaccgctacagagaggtgcccccgtacgacatgaaggct
tactatggccgctcggtggacttcagagacccctttgagaaggagagatacagagagtgg
gagaggaactacagagagtggtacgagaagttttacaagggctatgccgtgggtgctcag
ccacggcctccggtgaacagagagaacttctctccagaaaggtttggcccgcctgggacc
agacgagagaattcaccgtatgctcggggacggagggaggagtatcccgctgggcagagc
cacaggaatcgtaacgtagctggaaactaccctgagaagcctgggagagagagccatggc
atcaaagatcctacaaaatcaaaagagaaggaggtggaaaatccactgggagatggcaaa
ggcaataaacataaaaaacaccggaagagaagaaaaggggatgagaatgaaggatttccc
aacgttgagctgttagaaggagcaagaaaaccaagagagccagttccaacagaagatgct
aaaacagactctctgttcatgctgccgagcagggatgatgccacccctgtaagggacgag
cccatggaagcagattccattgctttcaaaccagtgtctgaaaaggagaaaaaagagaag
gataagccaaaagcaaagattgagaaaacaaagcggaaggtagaagtggcagctgctccg
aagaaagacaacgtagcaaaaccagctaaagcttcccaggaaaaggtggaccctgatcgc
gaaaaatctcctcgaacagaacctcctgtgaaaaaagccaaggaagagctgccaaagaca
gacagtgttaaaacctcttcctctcagaaggatgagaaggctcttggtacaccacggaag
gctcatcccaaagtgacaaaggatcacccagaaacaagaccagccaaggaggagaaggca
aagaaggaacatcctaaagaagccaaggcagagaagccctccagcaaggaggagaagtca
aagaaacctgctgagaaaagcaaactttccgatgccaaacttgagaaaaggaaaagaaaa
gcagaggagaaggctgataaagaacacgaagccacttctgcaaaggcctctaaacccgaa
agtgcagaattgaaaacatcgcccaaggggaaggctgagcccgagggggagaaaggagag
cggacaccagaaaaggataaagctgcttttcttaacaacccgtccaaaaagattaaactt
aaccgtgaaactggaaagaagattgtgagcggggaaaacgtgccacctggaaaagaagct
gtggagaaacctgagcccagcagcagcaaagttaaagcagaaaaggcaaagggaaaagca
aggaggaaagtggcagcagctgacggtgctagctcgactcttgtggattacaccagcacg
agttccactgggggaagccctgtcaggaagcctgaggagaagccagacaccaaacgaact
gtcattaagaccctggaggagtataacaacgacataacagcccctgctgaggatgtcatt
atcatgatccaggtccctcagtccaagtgggataaagatgactttgagtctgaagaggaa
gatgtgaaatccaccacccaggtgcccccagctgtaggaaaacccaccagtgttgtcaaa
cctgtgagtgcaaaggcaccaaaccccctcaaacacattgaaaaggagacagagcctctg
gagaaagcacagaaagctgcaaaagaggcgagttatgaaagcacccaacacgatgccaag
agttcaaaaagttccttgtcgagtgaaaaaggtaaaaccaaagaccgggatcattctttg
tcagacaaggacagttctgagaagaggaagagcagtgttcagccagaaaaagagcactca
gaacgtgcagctgaacaaggaaatggaaaaactgtatctcagtcttccaaagatggcaga
tcttcagagaagcacgatagtggccgtggctccgctgcgaaggacttcactcccaaccga
gacaagaagtctgaccacgaaggcagcagggagcattcgagttccaagcgcagggatgag
aagagcgaatcagcacggaggaaagactccccatcccgggtcagagactccacggcagcg
cagaagagcaaaccgagagaggagcgtgtggagccgcccaagaagggccctgcggaggcc
aagaggagcagctacagccccccacgggagcgcaaagccgccgagcacaaagccgtgcac
gaccccaagcgccccgctgaggaacacaaacccccggataaaaacccgggcaaggagaag
gagaaagagaaggagaaggagaagcatgtaccagaagtcaagggcaataaggagaaagag
ccagctgggaataaagcaccggtgaaacaggactcgccagaaattaaagtggagaaggag
aacgtggcgggccaggccgataagggcgcggcgaagccgaaggcgccggtgagcagcgcc
gcgcgcctctcgtccgatctcacccgcgagaccgacgaggccgcctttgtgccagactac
aacgagagcgacagcgagagcaacgtgtctgcaaaggacgaggaggctgcagggaaaacg
cccaaagaggcgaaggaaaaggctgtggagaagctgaaagaggaggcagcggccccggct
cccgccgagcagccggaggtgggcaggagccagagccagagcagccccagcgtcagccgc
agccgcagccacagcccctccgagagccagacacggagccacagcagcagtgccagctca
ggggagagccaggacagcaagaaaaagaaaaagaagaaggagaagaagaagcacaagaaa
cacaagaaacataagaagcataagaaacacgtgggaaatgaaacagaattggaaaagagc
caaaaacacaaacacaagaagaaaaaatcgaagaagagcaaagataaagagaaagacgac
caaaaagtgaaatctgtcacgacataa
DBGET
integrated database retrieval system
