Cyanistes caeruleus (blue tit): 111936245
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Entry
111936245 CDS
T05602
Symbol
NLRC3
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ccae04054
]
111936245 (NLRC3)
Pattern recognition receptors [BR:
ccae04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
111936245 (NLRC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_4
FISNA
LRR_8
DUF5474
Motif
Other DBs
NCBI-GeneID:
111936245
NCBI-ProteinID:
XP_023792873
LinkDB
All DBs
Position
14
AA seq
1135 aa
AA seq
DB search
MSQEASDGRVRGSSALLPFPVTPHSQGCSRTHLSLCPSVPLSCPTGACINRYHRQLARSI
SPQLLEDIASPLHRLELLRAQGAAQVQAVSPLPQQVXLHVPAGRDSHTSLSLQSFTDTSS
SHQCLCHQRVHEPVVQKHLESLQSSCGNGLETGALQRLTNLLLVEGLTDIQQKEHDILQV
ETTKGLPNTSQSIPLEKLFLPLSKVSIPPRISVTIGVAGIGKSTLVKLFVCSWAKGEISR
DTMFVLPLTFRELNTYEKLSAERLLCSARPHTTEPGPVPAGAARTLLILDGLDEFKTPLD
FSNAVVCTDPKKEIQVDSLITNIIRGNLLQEASVWVTSRPAAARQIPSGLVDRMTEIRGF
GAAEMKDFLDQMFLGNRDLSSQVLQHIRANRSLHVLCTIPSFCWISGSSIAYFLKCSSDR
SQEATVVPRTLSEIYSYYFKMALSGDWLEKPRETLRIEQAVNTSKKLVGSLGRLAFCGLL
RRKHVFYEQDMKAYGIDLSLLHSSLSSRLLLKEDMQASTAYCFSHLTIQEFLAALYYYTA
AKRAFFDLFTESGVSWPRLGFLSHFRSAVQRALQAEDRQLDIFIRFLSGLLSPQVNELLS
GWLLVKDEHGGLRSQAIGVLQGCLNAEHAVSSRAVNAVRCLHEIQHTDTAKAVEEAMRSE
SLAGMLTPMNCSALAYLLQVSDVCLEETNLSNCLTYNVCKSLLSQLLFCHNLRLDNNQFK
DDVMELLGSVLSVKDCQIQRLSLAENQISNKGAKALARSLLVNRSLTVLDLRSNSIGPTG
AKALADALKKNQILLSLNLQHNSIKEHGATFLAEALLTNHRLVTLHLQKNAIGAQGARDI
AEALKQNRSLRELILSSNSVGDNGSIALAEALRVNHSLQSLDLQSNSISSTGVTALTAAL
CSNKGLLSLNLRENSISKEGGPAIARALRSNSTLRKLDLAANLLCDDGGKAIALAIKENR
ALTSLHLQWNFLQAKAATALAQALQSNSSLASLDLQENAIGDEGMAALSAALKVNTTLAD
LHLQVASVGAAGAQALAEALMVNKSLQILDLRGNSLGLAGAKAVANALKVNRSLRRLNLQ
ENSLGMDGAICIATALKGNHGLTYVNLQGNRIGQSGAKVISDTIRTNSPDCVVDV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaggaggcctctgatggaagagtcagaggcagctctgcactgctgcctttccct
gtcacccctcactcccagggctgctccaggacccacctgtccctctgtccctctgtccct
ctgtcctgtcccacaggggcctgcatcaaccggtaccaccggcagctggcgagatccatc
tccccacagctcctggaggacatcgcctcccctctgcacaggctggagctcctgagggcc
cagggggctgcccaggtgcaggcagtgagccccctgccccagcaggtgnagcttcatgtc
ccagctggcagggacagccacacctccctgtccctgcagagcttcacggacacctccagc
tcacaccagtgtctgtgtcatcagagagtccatgaacccgtcgtgcagaagcacctggag
agcctccagagctcctgtgggaatggcctggagacaggagccctgcagcgcctcaccaac
ctgctgctggtggaaggcctgaccgacatccagcagaaggagcacgacatcctgcaggtg
gaaaccaccaaaggcctgccaaacacatcccagagcatccccctggagaaactgttcctg
cctctctccaaagtcagcatcccccctcggatctccgtcaccatcggcgtggccgggatt
ggcaagagcacgctggtgaagctgtttgtctgcagctgggcaaagggggagatcagcagg
gacaccatgttcgtgctgcccctcaccttccgggagctcaacacctacgagaagctctct
gccgagcgcctgctgtgctcggcccgccctcacaccaccgagcccggccccgtcccggcc
ggagccgcccggaccctgctcatcctcgacggcctggatgagttcaaaacccccttggat
ttttccaacgcagtggtttgcaccgatcccaagaaggagatccaagtggacagcctgatc
accaacattatcaggggtaacctgctgcaggaggcctccgtgtgggtcacgtcgcggccg
gcggcggccaggcagattcccagcgggctggtggatcggatgacggaaatccgagggttt
ggggctgcagagatgaaggacttcttggaccagatgttcctgggcaacagagatctgtcc
agccaagtcctgcagcacatcagggctaacaggtcgctacacgtcctgtgcaccattcct
agtttttgctggatttctggctcctcaatcgcttatttcctgaaatgcagcagcgaccga
tcccaagaagcgaccgtggtccccaggaccctgtcagaaatctactcctattattttaaa
atggctctgagcggtgactggctggaaaagccacgagaaaccctcaggattgagcaggct
gtgaacaccagcaagaagctggtgggcagcctgggcaggctggccttctgcgggctgctg
cggaggaaacacgtgttctacgagcaggacatgaaggcctacggcatcgacctctccctg
ctgcacagcagcctctccagccgcctcctgctcaaggaggacatgcaggcctccacagcc
tactgcttctcccacttaaccatccaggagttcctggcagctctttattactacacggcg
gccaagcgggccttcttcgacctcttcacagagagcggcgtgtcctggcccaggctgggc
ttcctcagccacttcaggagcgccgttcagcgggcgctgcaggccgaggacaggcagctg
gacatcttcatccgcttcctctcggggctcctgtccccgcaggtgaacgagctgctctca
gggtggctgctggtgaaggacgagcacggcgggctcaggagccaggccatcggcgtcctg
cagggctgcctgaacgccgagcacgccgtctcctcgcgcgccgtcaacgccgtgcgctgc
ctgcacgagatccagcacacggacaccgccaaggctgtggaggaggccatgaggagcgag
agcttggccgggatgctcacccccatgaactgctctgccctggcttatctcctgcaggtc
tctgatgtttgcctggaggagacaaacctctccaactgcctcacctacaatgtctgtaag
agcctgctctcccagctcctcttctgccacaacctcaggctggacaataaccagtttaag
gacgatgtgatggagctgctgggcagtgtgctgagcgtgaaggattgccagatccagagg
ctcagcttggcagaaaatcagatcagcaacaagggagccaaagctctggccaggtctctg
ctggtgaacaggagcctgacggtgctggacctgcggagcaactccatcggccccaccgga
gcaaaagccctggctgatgccctgaaaaaaaaccaaatcctgctgtccctgaacctccag
cacaactccatcaaggagcacggggccaccttcctggccgaggccctgctgaccaaccac
cggctggtgaccctgcacctgcagaaaaacgccatcggagcccagggcgcccgggacatc
gcggaggcgctgaagcagaaccgcagcctgagggagctgatactctcgagcaactcggtg
ggagacaacggctccatcgccttggccgaagctctgagggtgaaccacagcctgcaaagc
cttgatctccagagcaactccatcagcagcacaggggtcacagcactgacagcagctctc
tgctccaacaagggactcctcagcctcaacctccgggagaactccatcagcaaggagggc
ggtcccgccatcgcccgcgccctgcggagcaacagcaccctcaggaagctggacttggcg
gccaacctgctgtgcgatgatgggggcaaggccatcgccttggccatcaaagagaaccgg
gcactcacgtccctccacttgcagtggaacttcctccaggccaaagcagccacggccctg
gcacaagcactgcagtccaacagcagcctggccagcctcgacctgcaggagaacgccatc
ggagacgagggaatggccgccctgtccgctgcactcaaggtcaacaccaccctggcagat
ctccacctgcaagtggcttcagttggcgcggccggtgcccaagccctggcagaagccttg
atggtcaacaagagcctgcagatcctggacctgcggggaaactccctgggcctggctggg
gccaaggccgtggccaacgcgctgaaggtgaaccgcagcctccgacggctcaacctgcag
gaaaactccctgggcatggacggagccatctgcatcgccaccgccctgaagggcaaccac
ggcctcacctatgtcaacctgcaggggaatcgcattgggcagtcgggagccaaggtgatc
tcggacaccatccggacaaactcgcccgactgcgtcgtggacgtgtga
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