Cyanistes caeruleus (blue tit): 111936361
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Entry
111936361 CDS
T05602
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccae03009
]
111936361 (DDX55)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111936361 (DDX55)
Ribosome biogenesis [BR:
ccae03009
]
Eukaryotic type
Pre-60S particles
Helicases
111936361 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SHOCT
AAA_22
Cas3-like_C_2
SBF_like
Motif
Other DBs
NCBI-GeneID:
111936361
NCBI-ProteinID:
XP_023792996
UniProt:
A0A8C0VP01
LinkDB
All DBs
Position
15
AA seq
553 aa
AA seq
DB search
MSNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLS
HFTKHFPMFSQILLIGGRNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVK
ALDVLVLDEADRLLDMGFEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRI
SVKEKGVAASNTQKTPTRLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYY
GKALESLIKQVKIMSIHGKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQY
DPPSSASAFVHRCGRTARIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTNVLDL
LPKLKSMALADRAVFEKGMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKM
PELRGKCFPDFTPVTVNTDSISFKDKNREKQRQKKLEEQRKEREENQGKKKFVKNKAWSK
QKAKREKKKKVTAKRKREEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNQR
LKAETVEDNESEG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaaagatgtggctgcagaagcggtcacaggcagtgggaaaaccttggcgttt
gtgattcccatactggaaattcttctcagacgggaagaaaaattaaagaaaatgcaggtt
ggagctataattatcacaccaacgagggaattggccattcaaattgatgaggtgctgtca
catttcacaaaacacttccccatgttcagtcagattcttttaattggtggaaggaacccc
atggaagatgttgagaagtttaaggaacatggtgggaacatcattgtggccaccccgggc
cgcctggaggatctgttcaggagaaaagcagatgggctggaccttgcaagctgtgtgaag
gctctggatgtgctggtgttggatgaagcagacagacttctagatatgggctttgaagca
agcttaaatgccattctggactttttgcccaagcagagaaggactggtctgttctcagct
acccagacccaggaggtggagaacctggtgagagcagggctgcggaaccccgtccgcatc
tcggtcaaggagaagggagtggcagccagcaacacccagaaaacccccacacgcctggag
aactattacatgatctgcaaggcagatgaaaaatttaaccagttggtgcattttcttcgg
cagcacaaacaggaaaaacatctggtctttttcagcacgtgtgcctgcgtggaatactat
gggaaggctctggaatccttaattaaacaggtgaaaataatgagcatccatgggaaaatg
aagcacaaacgtaacaagattttcacggagtttcggaagctcccagggggcattttggtg
tgcacagatgtgatggctcgtggcattgacattccagaagtgcactgggtgttgcagtat
gacccacccagcagtgccagtgccttcgtgcatcgctgtggtcgcacggcacggattggc
aacgtgggcagtgcactggtctttttgcttcccatggaagaatcctacattaactttctc
tcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacagacaaatgtgttggatctt
cttcccaagctgaagtccatggccctggctgacagggcagtgtttgagaaagggatgaaa
gcctttgtgtcttacgtccaggcttatgccaaacacgaatgtaatctgatcttccggatc
aaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatgccaaagatg
cctgaactaagaggaaaatgtttcccagactttactccagttactgttaatacagactcc
atttcatttaaggataaaaacagagaaaagcagagacaaaagaaattagaagaacaaaga
aaagaaagagaggaaaatcaagggaaaaagaaatttgtaaagaacaaagcatggtcaaag
cagaaagccaagagggagaagaaaaagaaagtaacagctaagaggaagcgtgaagagggc
tctgatattgaagatgaggatatggaggagttgctgaatgacacaagactcttgaaaaga
ttaaaaaagggaaaaattagtgaagaagagtttgagaagaaactaacaggcaaccaaagg
ctcaaagcagaaactgttgaggacaacgagtctgaaggctga
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