Cyanistes caeruleus (blue tit): 111936421 Help Entry 111936421         CDS       T05602                                  Symbol CAPRIN2 Name (RefSeq) caprin-2 isoform X1   KO K18744   caprin-2 Organism ccae  Cyanistes caeruleus (blue tit) Brite KEGG Orthology (KO) [BR:ccae00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccae03019]     111936421 (CAPRIN2) Messenger RNA biogenesis [BR:ccae03019]  Eukaryotic type   mRNA surveillance and transport factors    Factors involved in mRNA localization     Other mRNA localization factors      111936421 (CAPRIN2) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Caprin-1_C Caprin-1_dimer C1q Motif Other DBs NCBI-GeneID:  111936421 NCBI-ProteinID:  XP_023793131 LinkDB All DBs Position 1 AA seq 1163 aa AA seqDB search MVQLSQAPFHRPSSPSGRSEEGEEKRMKAAKQQVTPTGESPAPASPLQSALSTAASPSQA YETYIDNGLICLKHKIRNIEKKKLKLEDYKDRLKKGETLNQDQLEAVEKYDEVVHNLEFA KELQKTFSGLSQDLLKAQKKAQRRESLLKLEAEKKKLRTILQVQYVLQNFTQEHVQKDFK GGVNGAIYLPSKELDYLIRFAKLTCPERNENLRVEDQMEQSSLYFWDLLEGSEKPVVGTT YKHMKDLLSKLLDSGYFESIPTPRTTVPVKELEEVNRKPEKTRQLSKGESAKEPESIMEL MKSEIQPQEFLNRRYLPEAEYSVKKKPEEPRSWEAECAKKQEPPKSWEMLVDIKEQEQKQ ETLKPWEARAKEEEQKHQSAKSWETRVEEEQQKKLEAPKAWVARVREEQESPKPWVAKVR EEQDLKKQESPKPWVTKGREEQEQKKQESSKPWVTKVKEEPEEKQESPKPWVTQTREQPE QKKPDPMKTWEVPVREEPEQKKQEPMKAWAAHVREEPEQKKQETREAWEKADRQQQVSSP QLQNPPKSWAAASMGPKEQMGPKKFDMEPKEKRDRKPKVEYKIKKVPKPVHQPAAEFCST STLPKDPVLRREKLQDLMTQIQGTYNFMQESILDFDKASPSAIGSSQPPSVTPASSPVAS KEQKLPSQSDFLQQPLKAAASSMVLHGSNTSLASADHALSGSETEDLVTPQASTPLSQEN EKYTLYQTSSRISEPLMPKKMEIAQATIPLPSEPQSPLPTSSTPVPSVPPAQSFQSPPAS SSSVTITAAPFQAMQTVFKVNAPLPPRKDQEVKEDSLSAGYNQSFSTASTQTPPQCQLQS SHVAEQTSLSQESLSSAVNYQPDGAVPVSNGSLAFYPAQANVIPRPPQPYLNSRGSVRGS ARGGRSLANSYRSPGGYKGFDVYRGSPSLTNGNYGQLQFPGRDYAGMPYSQRDVNYQQCY KRGGISSGPRANSRAGWSDSSQVSSPERDNETFNSGDSGQGDSRSITPVDMPVTSQAATI LPVHVYPLPQQMRVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDIQLGRFNCPVNGT YVFIFHMLKLAVNVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAVLQLFQGDQIWLRL HRGAIYGSSWKYSTFSGYLLYQD NT seq 3492 nt NT seq  +upstreamnt  +downstreamnt atggtgcagctttcccaggcccctttccatcgtccatcatcaccttcaggccggtcggag gaaggggaggagaagaggatgaaggcggccaagcagcaggtgaccccgactggggagagc ccggctcccgccagccccctgcagtccgcgctgagcacggcggcctctccttcccaagcg tatgagacctacatcgacaacgggctcatctgcctcaaacacaagatcaggaacatcgag aaaaagaagctcaaactagaagactataaagatcgtctgaagaagggagaaaccctcaat caagaccaattggaggcagtagagaaatatgatgaagtagtgcacaacctggaatttgcc aaggagcttcagaagactttttcaggacttagccaagatctgctgaaagcacagaagaag gctcagcggagagagagtctattgaagcttgaagcagagaagaaaaagctgcgtacaata cttcaagtccaatatgtgctgcagaacttcactcaagaacatgttcagaaagatttcaaa ggtggtgtgaatggtgcaatatacttgccttctaaagaattagactacctcataagattt gcaaaactgacgtgtccagagagaaatgagaacttgcgtgtcgaagaccagatggaacaa tcatctctttacttctgggaccttctagaaggaagtgagaaacctgtggtcggaacaaca tataaacacatgaaggacctgttatccaaacttctagactctggctactttgaaagtatt ccaactcctcgcaccactgtgccagttaaagaattggaagaagtaaatagaaaacctgag aaaacaagacagctgtcaaagggagagtctgccaaagaaccagaatccattatggagctt atgaaatctgaaatacagccacaggagtttctcaacaggcgttatttgcctgaagcagaa tactctgtcaagaagaagccagaagagcccagatcttgggaagccgagtgtgctaaaaaa caagaacctccaaagtcctgggagatgcttgttgatattaaagagcaggagcagaaacaa gagaccttaaagccttgggaagctcgtgctaaggaggaggaacagaagcatcagtctgca aagtcctgggagacccgtgtggaggaggaacaacaaaagaagctggaagctccaaaggca tgggtagcacgtgtccgagaggagcaggagtctcccaaaccctgggtagcaaaggtcagg gaagagcaggacctgaagaaacaggaatcacctaagccatgggttacaaaaggtagggaa gagcaggagcagaaaaagcaggagtcctcaaaaccttgggtaaccaaagttaaggaagaa ccagaagaaaagcaggaatctccaaaaccttgggtaacccaaactagggagcaaccagaa caaaagaagccagaccctatgaaaacatgggaagtgcctgttagggaagagccagagcaa aagaagcaggagcctatgaaggcttgggctgcacatgttagggaggagccagaacaaaag aagcaggagactcgagaggcttgggaaaaagctgacaggcagcagcaagtgtcatcaccg cagttacagaaccctccgaagtcctgggcagctgccagtatggggccaaaggaacagatg gggccaaagaagtttgatatggaacccaaagaaaagcgggaccgcaaaccgaaggttgaa tacaagattaaaaaagtgcctaaacctgtacatcagccagctgcagaattttgttctact tcaactcttccaaaagatccagtattgagaagggaaaaacttcaggatctgatgactcag atacaagggacttacaacttcatgcaagagtccattctggattttgataaagcttcacca agtgccattggttcatcccaacctccttcagttactccagcaagtagtcctgtagcttca aaagagcagaaactgccaagtcagagtgattttcttcaacagccccttaaggctgctgct tcatccatggtgctgcatggttcaaacacttccctggcatctgctgatcatgctctttct ggctctgaaactgaagacttggtgacaccacaggcatcaacaccactttctcaagagaat gagaaatatactctgtatcagacaagttcacgtatttctgagccactgatgcctaaaaag atggaaattgcccaggcaactattcccctcccaagtgagccacagtcaccattgcctact tcaagcacccccgtgccatcagtgccaccagcacaaagctttcagtctcctccagcaagc agcagttctgtcacaataacagcagctccctttcaggctatgcagactgtatttaaagtg aacgcaccattgcctccacgtaaagaccaggaagttaaagaggattctttatcagcggga tataatcagagtttctccacagcaagtacacagactcctcctcaatgccaattgcagtct tctcatgttgcagaacaaacctctctttcacaagaatctctgtcttcagcagtgaactat caacctgatggagctgttcctgtaagcaatggtagccttgccttttatccagcacaggct aatgttattcccagacccccacagccttacctcaacagtcgtgggtctgtcagagggtct gctagaggtggaaggtcactggctaattcataccgctcccctggtggttacaaaggtttt gatgtttacagaggttcaccttcattaactaatggcaactatggccagctacagtttcct ggtagagattatgctggaatgccatattctcagagggatgttaattaccagcagtgctat aaacgaggtgggataagtagtggtcctcgagcaaattcaagagcagggtggagtgactct tcccaggtgagcagcccagaacgagataatgagacctttaacagtggggactctgggcag ggagactcccgcagcatcacccctgtggatatgccagtgaccagccaggctgccaccata ctcccggtgcacgtctacccgctcccacagcagatgagggtcgccttctctgcagctcga acatccaacctggcccctggaactctagaccagcccattgtgtttgacctgttgctgaac aaccttggagaaacttttgatatccagcttggtaggttcaactgtccggtgaatggcact tatgtcttcatcttccacatgctgaaactggctgtaaatgtccctctgtatgtgaatctc atgaagaatgaagaggtccttgtgtcagcatatgcaaatgatggggctcctgatcatgaa acagccagtaaccatgcagtcctgcagctgttccagggagatcagatctggctacggctg catcggggagccatctatggaagtagctggaaatactccaccttttcgggatacctcctt tatcaggactaa

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