Cyanistes caeruleus (blue tit): 111936654
Help
Entry
111936654 CDS
T05602
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
ccae03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111936654 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111936654 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccae01009
]
111936654 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111936654 (SMARCB1)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111936654 (SMARCB1)
Protein phosphatases and associated proteins [BR:
ccae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111936654 (SMARCB1)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111936654 (SMARCB1)
SWI/SNF complex
111936654 (SMARCB1)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111936654 (SMARCB1)
PBAF complex
111936654 (SMARCB1)
SWI/SNF complex
111936654 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
111936654
NCBI-ProteinID:
XP_023793490
UniProt:
A0A8C0VM09
LinkDB
All DBs
Position
15
AA seq
368 aa
AA seq
DB search
MEYQATSPLLFLQVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHENQRSHSPRR
YHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKRNNQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIESYPTDSILEDQ
SDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPAW
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggaataccaggccacatctccacttctcttcttgcaggtgggaaactacttgcgcatg
tttcggggttccctgtacaagaggtacccctcgctctggaggcgcctggccacggtggaa
gaaaggaagaagattgtggcctcttcacatgaaaaccagcggtctcacagtccccgaaga
tatcatggctatacaacattagccactagtgtgacgctgctgaaggcctctgaagtggaa
gagatcttggatggaaatgatgagaagtacaaggcagtgtctatcagcacagaacctcct
acctacctcagagaacagaaagcaaagaggaacaaccagtgggtgccaaccctgcccaac
agctctcatcacctggatgcagtgccgtgctcaacaaccatcaacaggaaccgcatgggc
agggataagaagagaacattccctctgtgctttgatgaccatgacccagcagtgatccat
gagaatgcatcccagccagaggtcctggttccaatcaggcttgatatggaaattgatggg
cagaaactccgagatgcatttacgtggaacatgaatgaaaagctgatgacccctgaaatg
ttctccgagattctttgtgatgacctggatttgaatcctctgacctttgtccctgctatt
gcatctgccatccggcagcagatcgagtcgtacccgactgacagcatcctggaagatcag
tcagaccaacgagttattatcaagctgaacatccatgtaggaaacatctccctggtagac
cagtttgagtgggacatgtcagagaaggagaactcaccagagaagtttgccttgaagcta
tgctcagagcttggcctgggcggggagtttgtcactaccattgcgtacagcatccgggga
cagctgagctggcaccagaagacctacgccttcagcgagaaccctctgccgactgtggag
atcgcaattcgcaacacgggggacgctgaccagtggtgccctctcctggaaaccctcaca
gacgctgagatggagaagaagatcagagaccaggacagaaacacaaggcgcatgagacgt
ttggccaatactgctccagcctggtaa
DBGET
integrated database retrieval system
