Cyanistes caeruleus (blue tit): 111936666
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Entry
111936666 CDS
T05602
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111936666 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111936666 (THOC5)
03041 Spliceosome [BR:
ccae03041
]
111936666 (THOC5)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
111936666 (THOC5)
Spliceosome [BR:
ccae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111936666 (THOC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
111936666
NCBI-ProteinID:
XP_023793509
UniProt:
A0A8C0VNA5
LinkDB
All DBs
Position
15
AA seq
710 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTDQETQTLLWRVSTKLEDPSGICMVPSKPPD
VRYYSEESEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKENASEIDERRVQSCV
HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSK
HEEIELVSLEEFYKEAPPEISRPAITLTEPHQQTLARLDWELEQRKRLAEKYKECLTSKE
KILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFV
QASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQL
DDKRKEMLKRHPLSVTLDLKCKDENVLHLTFHYLMNLNIMTVKAKVTTAMEMTTAISAGD
LLSPDSLLNCLYPGDHGRKTPNPANQFQFDKVGILTLSDYMTELGHPYVWVQKLGGLHFP
KDQPQHTVAADNSLSASHMELTVKLLRSRLQSRLALHKQFASLEHGVVPVSSECQQLFPT
KIVSRLVKWTAIPYEDYAELPYTKDVIEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGY
STLPPVFSLCLNWKGERNSSNDDNIRAMEREVNVYYKELWGPKPGYQLLTNQLQRLCMVL
DVYLETEPHDPSVEGPKEFPQEKMCLRLVRGPLRLKPFKFNYPQGFFSHR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacagacggggtccca
gccgagggcaagcggggcaagggcgacacagaccaggagacacaaacactcctctggaga
gtaagcacaaagctggaagatccctcagggatttgcatggtgccttcaaagcctcccgat
gtcaggtactacagcgaggagagcgaggtggatctgcgcgaccccatcaaggactacgag
ctctacagggagacctgccaggagctccagaggctcatggcagagatccaggagctgaag
agccggggcatcaaggaaaatgcctccgagatcgacgagcggcgcgtccagagctgcgtc
cacttcatgaccctgaagaagctgaaccgcctggctcacatccggctgaagaagggcagg
gaccagacccacgaggcaaagcagaaggtcgatgcctatcacctgcagctccagaacctg
ctctacgaggtgatgcacctgcagaaagagatcaccaagtgcctggagttcaaatccaaa
catgaggagatcgagctggtgagcctggaggagttctacaaagaggccccccctgaaatc
agccgccctgccatcaccctgaccgagccccaccagcagaccctggcccgcctggactgg
gagctggagcagcgcaagaggctggcagagaagtacaaggagtgtctgaccagcaaggag
aagatcctgaaggagatcgaggtgaagaaggaatatctgagcagcctccagcctcgactc
aacagcatcatgcaggcctccctgcctgtccaggagtacctgttcatgccctttgaccag
gctcacaagcagtacgagactgcccggcacctcccgccgcctctctacgtcctcttcgtc
caagccagtgcctacggacaggcctgtgataagaagctggtggtggccattgaagggagt
gtggaggaagccaaggccctttataagccacctgaggactcgcaggatgatgagagtgat
tccgacgcagaggaggagcaaaccacgaagcggcgcaggcccaccctgggcgtgcagctg
gatgacaaacgcaaggagatgctgaagagacaccccttgtcagtcaccctcgacttgaag
tgcaaagatgagaacgtgcttcacctgaccttccactacctgatgaacctcaacatcatg
acagtgaaagccaaggtgaccactgccatggagatgaccacagccatcagtgctggggac
ctgctctccccagactccctcctcaactgcctctatccaggggaccacgggaggaaaacg
cccaacccagccaaccagttccagttcgataaagtgggcatcctgaccctgagtgactac
atgacagagctgggacacccctacgtgtgggtgcagaagctgggtggcctgcatttcccc
aaggatcagcctcagcacacggtggctgctgacaattccctgagtgccagccacatggag
ctgacggtgaagctgctccggagccgcctgcagtcccgcctggccctgcacaagcagttt
gcatccctggagcacggtgttgtgccggtgtccagcgagtgccagcagctcttcccgacc
aaaatcgtctcacgcctggtgaagtggactgccattccctacgaggattatgctgagctg
ccctacactaaagatgtgatagaggctggcttggctgaagacactcacctctattacatg
gccctgatagagaggggaacagccaagctccaggcggccgtggtgctgaatcctggttac
tccacgctgcctcccgtcttcagcctgtgcctcaactggaagggagagcggaacagcagc
aacgacgacaacattcgggccatggaaagggaggtcaatgtctactacaaggagctgtgg
gggcccaaacctggctaccagctcctcaccaaccagctgcagcgcctgtgcatggtgctg
gacgtgtacctggagacagagccccacgatcccagcgtggaggggcccaaggaattcccc
caggagaagatgtgtctgcgcctggtcaggggtcccctgcgcctgaaacccttcaagttc
aactacccccaggggttcttcagccatcgctga
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