KEGG   Cyanistes caeruleus (blue tit): 111936674
Entry
111936674         CDS       T05602                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111936674 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccae03041]
    111936674 (SF3A1)
Spliceosome [BR:ccae03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    111936674 (SF3A1)
 Complex B
    111936674 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    111936674 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 111936674
NCBI-ProteinID: XP_023793532
LinkDB
Position
15
AA seq 676 aa
MQQQQSAQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARN
GRQFLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPK
EVLDQVYYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPP
PTTPEELGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPVQLDQDTQVQDMDE
GSDDEDEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITG
EKIPASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIF
GVEETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVP
EDDSKEKIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMP
RPPMTSVVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPP
VAPVPSPAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDK
TEWKLNGQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTS
GSLIHLALKERGGRKK
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgcagcagcagcagagtgcccagcagcagctcccacagaaagtgcaggcccaggtgatc
caggagacggtggttccgaaggagcccccacccgagttcgagttcatcgcggaccctccg
tccatctcggccttcgacctggatgtggtgaagctcacggcgcagttcgtggcccgcaat
gggaggcagttcctcacccagctcatgcagaaggagcagaggaattaccagtttgatttc
cttcgcccccagcacagcctgttcaactacttcaccaagctggtggagcagtacacaaag
atcttgatcccaccgaagggcttactcctcaagctcaagaaggaggctgaaaatcctaag
gaagtcctggatcaggtctattacagagtggagtgggccaagttccaggagcgagagaga
aagaaggaagaggaggagaaggagaaggagcgtgttgcttatgcccagattgactggcat
gactttgtggttgtggaaacagtcgacttccagcccaatgaacaagggaatttccctcct
cccaccactccagaagagctgggagctcgaatcctgatccaagagcgttacgagaagttt
ggagaaagtgaggaggtggagatggaggtggaatcagatgaggaagatgaaaagcaagag
aaaacagatgagcctccagtccagctggatcaggacacacaagtgcaagatatggatgag
gggtcagatgatgaagatgaaggtcagaaggttcctcctcctccagaaaccccgatgcca
cccccactccctcccacaccagatcaggtcattgtgcggaaagattacgatcccaaagcc
tcaaaaccgttaccacctgccccggctcctgatgagtaccttgtgtctcccatcactgga
gaaaagattcccgccagtaaaatgcaggagcacatgaggattgggctcctggatccacgg
tggctggagcagcgggatcgatccatccgcgagaagcagagtgatgatgaagtctatgcc
ccaggtttggatattgagagcagcctgaagcagctggcagaacgtcgtactgatatcttt
ggtgtagaagagactgccattggtaaaaagattggagaagaagagatccagaaaccagag
gaaaaggtgacctgggatggccactcaggcagcatggcccgcacacagcaggctgctcag
gccaatatcactctgcaagagcaaattgaagccatccacaaggccaagggactggtgcca
gaggatgacagcaaggagaagattgggcccagcaaacccaatgagataccccagccaccc
cctccttcctcagcctccaacccccctgccagcgcccagcccatcacatccgtacctcgt
ccacccaccatgcctcctcccgtccgcgctgccgtggtttctgcagttccggtcatgcct
cgtccccccatgacctccgtggtccggctgcccccaggatccgtcatagccacccccatg
cctcccataatccacaccccacggatcaacgtggtgcccatgcccccctctgctcccccc
atcatgagcccccgcccgccccccatgatagtccccacagcctttgtccctgctcctccc
gtggctccggtcccgtccccggcgccgatgcctcccgttcaccccccaccacccatggag
gatgagccagtctccaagaaactgaagagtgaggacagcctgattccagaggaggaattt
ctgcgcaggaacaagggcccagtcacagtcaaagtccaggttcccaacatgcaggacaag
acagaatggaagctgaatggccaagtgctggtgttcaccctgcccctctcagaccaggtg
tctgttataaaggttaagatccacgaggccacagggatgccagctgggaagcagaagctg
cagtacgagggcatcttcatcaaggattccaactccctggcttattacaacatgacaagt
ggctctctgattcacctggcactcaaagagagaggaggcaggaagaaatag

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