Cyanistes caeruleus (blue tit): 111936941 Help Entry 111936941         CDS       T05602                                  Symbol TLR4 Name (RefSeq) toll-like receptor 4   KO K10160   toll-like receptor 4 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04145   Phagosome ccae04217   Necroptosis ccae04620   Toll-like receptor signaling pathway ccae04621   NOD-like receptor signaling pathway ccae05132   Salmonella infection ccae05164   Influenza A Brite KEGG Orthology (KO) [BR:ccae00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     111936941 (TLR4)   09143 Cell growth and death    04217 Necroptosis     111936941 (TLR4)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     111936941 (TLR4)    04621 NOD-like receptor signaling pathway     111936941 (TLR4)  09160 Human Diseases   09172 Infectious disease: viral    05164 Influenza A     111936941 (TLR4)   09171 Infectious disease: bacterial    05132 Salmonella infection     111936941 (TLR4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccae04131]     111936941 (TLR4)   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:ccae04054]     111936941 (TLR4)    04090 CD molecules [BR:ccae04090]     111936941 (TLR4)    00536 Glycosaminoglycan binding proteins [BR:ccae00536]     111936941 (TLR4) Membrane trafficking [BR:ccae04131]  Endocytosis   Phagocytosis    Toll-like receptors     111936941 (TLR4) Pattern recognition receptors [BR:ccae04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    111936941 (TLR4) CD molecules [BR:ccae04090]  Proteins   111936941 (TLR4) Glycosaminoglycan binding proteins [BR:ccae00536]  Hyaluronan   Cell surface receptors    111936941 (TLR4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  LRR_8 LRR_4 TIR LRR_5 TIR_2 LRR_EndoS LRR_9 LRR_Zer-1 LRR_NXF1-5 LRR_LRWD1 LRR_R13L1-DRL21 Motif Other DBs NCBI-GeneID:  111936941 NCBI-ProteinID:  XP_023793858 LinkDB All DBs Position 17 AA seq 842 aa AA seqDB search MPRRGAHPVGTLLVLLQLSFVPCPVAGCLLDPCLEVTPNTTFRCTGLNISGVPDGVPNTT QNLDLSFSNLKSLESNYFASVPELQLLDLSRCHLHTIEDNSFIDLHRLSTLILTANSLQH LGKAAFYGLTSLKKLVLVETNRTSLSELPIGHLHTLQELNLGHNSITSLKLPEYFTNMTS LRHLSFFSNKITSISRGDLDALREGNRLNLTLVLSLNNIKSIEPGAFAGIHLAELALRSA FENFMMQTSLQGLAGLQVSRLIVGEFRDSDKLQDFERGLLTGLCQVQMEEFVLICFREFE DDTDTLFNCIGNVSTVRLVDLGLEEISQVPARSKVKQLECKKCSFEDVPALKLSLFKELR VLRITKNKRLKNFSQNFEGLTNLEVIDLSENRLTFSGCCSPQFQNCPNLKHLNLSFNSNI RLTGDFANVKNLLYLDLQHTTLFGPGSYPVFLSLQKLIYLDISHTKTEVKSQCTFCGLNS LQVLKMAGNSFEGNKLAGNFKNLSHLHTLDISSCKLEHVDQSTFDALSELKELNISNNKL LTFDPGVYRPLQALRVLDFSRNQLTVLLHSAWEILPDSLVLLDISQNLFDCSCVYLDFLT WIKEKQELLQNKELMLCHTPSYTVNVSLPSFDLSSCHVSAGKVASSVVVLLCVVVLLFLI YKYYFQLYYSVVLLSGCKHSAERGDTYDAFVIHSSKDQEWVTKELVEPLEGGAPPFRLCL YYRDFLPGVPVVTNIIQEGFLSSRNVIAVISADFLESKWCSFEFDIAQSWQLVEGKAGII MIVLENVDKALLRQRLGLSRYLRRNTYLEWKDKEISKHIFCRQLTGVLLEGKKWNHEEVK LM NT seq 2529 nt NT seq  +upstreamnt  +downstreamnt atgcccaggagaggagcccatcctgtggggacactcctggtgctgctgcagctgtcattt gtcccgtgcccagtggcaggctgcctcctggatccctgcttggaggtcacccctaacaca accttcagatgcactggactgaacatctctggagttcctgatggagtcccaaacaccacc cagaacctggacctcagtttcagcaacctgaaatcactggagtcaaattattttgcatca gtccctgagctgcagcttctggatctctcaaggtgccacctccacacaatagaagataac tcctttattgatctccacagactttccactttgattttaactgccaattccctccagcac ctggggaaagcagctttctatggcttaacatctctgaaaaagctggttctggtggaaacc aacagaacttctctgtctgagctgcccattggacacttgcacactctgcaggagctgaat ttaggccacaatagcattacttcattgaagcttcctgagtatttcaccaacatgacctcc ctcaggcacctgagcttcttctctaacaagatcacatctatctccagaggagaccttgat gccctgagggaagggaacaggctcaacctcactctggtgctttccttgaacaatataaaa tccatagagccgggggcctttgcggggattcacctcgctgagctggccctcaggtccgct tttgagaacttcatgatgcaaacttctctgcaaggcctggctggtttgcaggtcagcaga ctcatagttggggagttcagggacagtgataaactgcaggactttgagagggggctcttg actggactgtgccaggtacagatggaagagtttgtcttaatctgcttcagggagtttgag gatgacacagacactctctttaactgcataggcaacgtctccactgttcgcttggtggac ctcggacttgaggagatatcacaggttcctgcgaggtctaaagtgaaacagctggaatgc aaaaaatgcagttttgaggatgtgcctgccctgaagctgtcacttttcaaggagctgaga gtgctccgtattaccaagaacaaaagactcaaaaacttcagtcagaattttgagggtctc actaacctggaggttatagatttgagtgagaatagactcaccttcagcggttgctgctcc cctcagtttcaaaattgtccaaatttgaaacacttgaacttaagcttcaattctaatatc agattgactggagatttcgctaatgtgaagaatttgttatatttggaccttcagcacaca actttatttggtcctggctcctaccctgtctttctgtcccttcagaaactaatttacctt gatatttcccacaccaaaaccgaagttaaatcccagtgcacgttttgtggcttgaactct ttgcaagtgctcaagatggcaggaaactcctttgagggcaataaactggcaggcaacttc aaaaacctaagtcacctccacaccttggatatttcaagctgcaaattagaacacgtggat caaagtacttttgatgccctctccgagctaaaagagctaaacatcagcaacaataagctc ctgacctttgatcctggagtctaccggccgctccaagccctcagagtcctggatttcagc agaaaccagctgactgttctgctgcactcagcctgggaaatcctgcctgacagcctggtc ctgttggatatctctcaaaacctgtttgactgctcctgtgtgtacctggacttcctgaca tggatcaaggagaagcaggagctgctgcagaacaaggagctgatgctgtgccacactccc tcctacacggtgaacgtgagcctgccaagctttgacctgtcctcctgccacgtcagcgca ggcaaggttgcctcctcagtggttgtgctgctctgtgtagtggtgctccttttcctgatt tacaagtactacttccagctctactactctgtggtgctgctcagtgggtgcaaacactcc gcagaaagaggtgacacctacgatgcctttgtcatccactccagcaaagaccaggaatgg gtgacaaaggagctggtggaacccttggaagggggagcacctcccttccgcctgtgtctg tactacagggacttcctgccaggggtacctgttgtcaccaatatcatccaggaggggttt ctcagtagcaggaatgtcatcgcagtcatctccgctgacttcctggagagcaagtggtgc agctttgagtttgacattgcccagtcctggcagctggtggagggaaaggctgggatcatc atgattgtgctggaaaatgtggataaggccctgctgaggcagaggctggggctgtctcgg tacctgaggaggaacacctacctggagtggaaagacaaggaaataagcaagcacatcttc tgcaggcagctgacaggggtgctgctggaaggcaaaaaatggaatcatgaggaggtaaaa ctcatgtga

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