KEGG   Cyanistes caeruleus (blue tit): 111937003
Entry
111937003         CDS       T05602                                 
Symbol
EXOSC2
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111937003 (EXOSC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccae03019]
    111937003 (EXOSC2)
Messenger RNA biogenesis [BR:ccae03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111937003 (EXOSC2)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     111937003 (EXOSC2)
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 EXOSC1
Other DBs
NCBI-GeneID: 111937003
NCBI-ProteinID: XP_023793968
LinkDB
Position
17
AA seq 294 aa
MAAVTMRLPAVRAPLDSSAPRGGEKHLVAPGDTITTDTGYMRGHGTYVEDEKLIASVAGV
VERVNKLVCVRALKARYNGEIGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSINLPGGE
LRRKSAEDELAMRDYLQEGDLISAEVQSIFADGAVSLHTRSLKYGKLGQGVLVQVSPSLV
KRQKTHFHDLPCGASVILGNNGFIWIYPTPEQKDDEAGGYTANLEPVPLSDREVISRLRN
CIVALVTHKMMLFDTSILYCYEASLPHQIKDILKPEVTEEIILEARQRLLDLEG
NT seq 885 nt   +upstreamnt  +downstreamnt
atggcggcggtcaccatgaggctgccagcggtccgcgcccctctggattccagcgcgccc
cggggcggcgagaagcacctggtggcaccgggggacacgatcaccacggacacgggatat
atgaggggccacggtacttatgtggaggacgagaagctgatcgcctcggtggccggcgtg
gtagagagggtgaacaagctggtgtgtgtcagggcgctgaaggccaggtacaacggcgag
atcggtgacatcgtggtcgggaggattacggaggttcagcagaagcgatggaaagtggaa
acaaattccaggctggattcagtcctgttactatcatctataaatttacctggtggggag
ctgagaaggaaatcagcagaagatgagcttgcaatgagggactacctgcaagaaggggat
ctcatcagcgcagaggttcagtctatatttgctgatggggctgtatcactgcacacccgg
agcctgaagtacgggaagcttggccagggtgtgctggttcaggtctctccctcccttgtg
aaacgccagaagactcatttccacgacctgccctgtggtgcatccgtgatcctcggcaac
aatggcttcatctggatctacccaactccggagcagaaggatgacgaggctggaggctac
accgccaacttggagccagttcccttgtctgaccgggaggtgatctcacggctccgaaac
tgcattgtggctctggttactcacaagatgatgctctttgacaccagcatcctgtattgc
tatgaagcatcccttcctcatcagatcaaggacatcctgaaaccagaggtgacagaggag
atcattctggaagctcgacagaggttgctggatttggaaggatag

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