Cyanistes caeruleus (blue tit): 111937071
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Entry
111937071 CDS
T05602
Symbol
PDZRN4
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing RING finger protein 4
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccae04121
]
111937071 (PDZRN4)
Enzymes [BR:
ccae01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111937071 (PDZRN4)
Ubiquitin system [BR:
ccae04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
111937071 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
111937071
NCBI-ProteinID:
XP_023794084
LinkDB
All DBs
Position
1
AA seq
772 aa
AA seq
DB search
MFLCCLFSHLCCILVFLXVNGKDLSKATHEEAVEAFRNAKEPIVVQVLRRAPATKAHSSS
QDVRFMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLLSDSCHSLHPVEHEFYEGNEY
LSSLPADADRAEDFEYEEVELCRVGSQEKLGLTVCYRTDDEEDTGIYVSEVDPNSIAARD
GRIREGDRILQINGQDVQNREEAVALLSSEECRKIVLLVARPEMQLEEGWLDDERNEFLE
ELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATSSSNNHEKDSGVGPTDESLRN
DESSEQENATEEQNSATLQSKRNLGHSQDTLGSVELQCNESFVSGEYIESDFIRNPEEEC
ERFRQLLELKCKIRNHGEYDLYYSSSMIECNRREQDGVEHELQLLNEELRNIELECQNIM
QAHRLQKVRDQYGDIWALHDESFRNYNTSTDLQRGKLDDIMEHPEKSDKDSSSAYNTAES
CRSTPLTVERSPDNSLQRVISITNRKNLRTTIVANQSSSGQSNRETTSAKTKPTEQNSAA
ENAVLASDSSKFTDQERQGSEHIPYLSPYHSSSYRYGNIPAHAKHYQSYMQLIQQKSAVE
YAQSQLSLVSMCKDSQKCAEPKMEWKVKIRSDGTRYITKRPVRDRILKERALKIKEERSG
MTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMMRSRLECLKESPQSGSEGKKE
INIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGTRVHNAFLSVTTV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatgctgccttttctctcacctttgctgtattcttgtttttctctaggtcaat
gggaaggacctctccaaggccactcatgaggaagcggtggaagctttccgcaatgccaag
gagcccattgtagttcaggttttacgacgagccccagctaccaaagctcacagcagctct
caggatgttcgctttatggatgccagcactcagactgacatcacttttgagcatattatg
gctctggccaagctaaggccctccacaccaccagttcctgacatctgcccttttctactt
tcagatagctgccattctcttcacccggtggagcatgaattttatgaaggtaatgagtat
ctttccagcctgcctgctgatgcagatagagcagaggactttgagtatgaggaggtggag
ctgtgccgcgttggcagccaggagaagctggggctgactgtctgttacagaacagatgat
gaggaggacacggggatctatgtcagcgaggttgatccaaacagcattgctgccagagat
ggacggatccgtgaaggagaccgcattttgcaaataaatggccaagatgtccagaacagg
gaagaggcagtggcgttgctctccagtgaagaatgcaggaaaattgtgttgctggtggcg
aggccagagatgcagctggaggaagggtggctggatgatgaaaggaatgaattcttagag
gagttaaacttggaaatgttggaagagcaacataatgaagcgatgcagtacacagccaat
gaggtggagcagccaaagaaacatgaagaggaagatggcactacagatactgcaacctca
tcatccaataatcatgagaaggacagtggggtgggacctacagatgaaagccttcgaaat
gatgagagctcagagcaagaaaatgcaaccgaggagcagaacagtgctaccctgcagagc
aaacggaatttgggccacagccaggatacattaggcagtgttgagctccagtgcaatgaa
agctttgtgtctggggaatacattgaatctgatttcataaggaacccagaggaggaatgt
gaaaggtttcggcagctgctggaactgaagtgcaagattcggaaccatggggagtatgat
ctttattactcaagcagcatgatagaatgcaacagaagagagcaagatggagtggagcac
gagctgcagctacttaacgaggaactgaggaatattgaactcgaatgtcagaatattatg
caagctcaccggctccaaaaggtgagagatcagtatggagacatttgggctttacatgat
gaaagtttcaggaattataacaccagcacagacttacaaagaggcaaactggatgatatc
atggagcaccctgagaagtctgacaaggacagctccagtgcctacaacactgctgaaagc
tgcaggagcactccactgacggtggagcgatcccctgataactctctccagagggtgatc
agcataaccaacaggaaaaacctgaggaccacaattgttgctaatcagtcatcctcagga
cagagcaacagggagacaacctcagccaaaaccaaacccactgagcaaaacagtgctgct
gagaacgcagtgctggcatcagatagcagcaaattcacagaccaggaaaggcaaggcagc
gagcacattccctatttgtctccatatcacagctcttcttacaggtacgggaacatacct
gctcacgcaaagcactatcaaagctatatgcagctgatccagcagaagtctgctgtggag
tacgcccaaagccagctcagcctggtcagcatgtgcaaagactcgcagaagtgtgcggag
cccaagatggaatggaaagtgaaaataaggagtgatgggacgaggtacatcacaaagaga
ccggttagagacagaatcctgaaggaacgtgccttaaaaattaaagaggaacgcagtggg
atgacgacagatgatgataccatgagtgagatgaagatgggtcgctactggagcaaagaa
gagcggaagcagcatttggtgcgagctaaggagcagaggaggcggcgggagttcatgatg
aggagcaggctggagtgtctcaaggaaagtccacagagtggcagcgagggcaaaaaagaa
atcaacattattgaactgagtcacaaaaagatgatgaaaaagagaaacaagaaaatcttg
gacaactggatgacaatacaagaactgatgacacatggtgctaaatccccagatggcaca
agagtgcacaatgcctttttatcagttactactgtatga
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integrated database retrieval system
