KEGG   Cyanistes caeruleus (blue tit): 111937463
Entry
111937463         CDS       T05602                                 
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03015  mRNA surveillance pathway
ccae05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    111937463 (CPSF4L)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    111937463 (CPSF4L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccae03021]
    111937463 (CPSF4L)
   03019 Messenger RNA biogenesis [BR:ccae03019]
    111937463 (CPSF4L)
Transcription machinery [BR:ccae03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     111937463 (CPSF4L)
Messenger RNA biogenesis [BR:ccae03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     111937463 (CPSF4L)
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-CCCH_12 Torus zf-CCCH_2 zf-CCCH_4 zf-CCCH_RBM22 zf-CCCH_3 zf-CCCH_11 Nab2-like_zf-CCCH_ zf-C3H1
Other DBs
NCBI-GeneID: 111937463
NCBI-ProteinID: XP_023794624
LinkDB
Position
18
AA seq 309 aa
MQHSRAARAGSALPGEEEEEGFGELLGSGVAAGTSGVGCSLWREVFSLGSCSAVLEQALP
RAGMMQELVAGVEKIRFDSEADVEELGARPLPFLGVDSVQGHPQPSGAKPTVCKHWLRGL
CKRGDGCGFLHDSDASRMPECCLHSKLGECSNKDCPFLHLDGTASTVGCPWYDRGFCRHG
PLCKYKHTRRVMCANYLVGFCPEGPKCKFVHLKAGLMTSSTEPAKEAGYPWGLVQRDLAA
AEEMGGEEEPPKEPPPRGTQHLAAPLWDTSRCPQSQQSLLEGGTRSKSGSGSPCASESRR
TPLGMLLGE
NT seq 930 nt   +upstreamnt  +downstreamnt
atgcagcactcgagggctgcccgggctggttctgctctgcctggggaggaggaagaggag
ggttttggagagttgctggggtctggggtggctgcagggacctctggagtggggtgctcc
ctttggagagaggtgttttccttggggagctgttctgccgtgctggagcaggctcttccc
cgagcagggatgatgcaggagctggtggctggtgtggagaagatcaggtttgactcggag
gctgatgtggaggagctcggagctcgacccctgcccttcctgggggtggacagtgtccag
ggccacccccagcccagcggggccaagcccacggtgtgcaagcactggctgcgagggctc
tgcaagaggggcgacggctgcggcttcctgcacgactcggatgccagcaggatgcccgag
tgctgtctgcactccaagctcggcgagtgcagcaacaaggactgtcccttcctgcacctc
gatggcaccgccagcaccgtgggctgtccctggtatgaccgaggcttctgcaggcacggt
cccctgtgcaagtacaagcacactaggagggtgatgtgtgccaactacctggtgggcttc
tgccccgagggacccaagtgcaaattcgtgcacctcaaggccgggctgatgacgagcagc
acagagccagccaaggaagctggatatccatgggggctggtacagcgggatctggctgct
gcagaggagatgggaggtgaggaagagccacccaaggagccacctccacgtggcacccag
cacctggcagctcctctgtgggacaccagccgctgtccccagagccaacagagcctgctg
gaaggaggaacccgctccaagagcggatcaggcagtccctgtgccagtgagagcaggagg
actccgctgggaatgctgctgggagagtga

DBGET integrated database retrieval system