Cyanistes caeruleus (blue tit): 111937746
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Entry
111937746 CDS
T05602
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111937746 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111937746 (PRPF8)
Spliceosome [BR:
ccae03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111937746 (PRPF8)
Complex C
U5 SnRNP specific factors
111937746 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111937746
NCBI-ProteinID:
XP_023794978
UniProt:
A0A8C0UBT3
LinkDB
All DBs
Position
19
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgttcccgtaccgcggcggctgcgccccggtgcccaacccgctggcgccg
ctgcccgactacatgtccgaggagaagctgcaggaaaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccgcaaaatcatccgcgaccacggcgatatgaccaataggaag
ttccggcacgacaagcgcgtctacctgggtgctctgaagtacatgccccatgctgtgctg
aagctcctggagaacatgcccatgccctgggagcagatccgagacgttcccgtcctgtac
cacatcactggcgccatctcctttgtcaatgagatcccctgggtcatcgagcccgtctac
atcgcccagtggggctctatgtggattatgatgaggcgagagaaaagggataggcgtcac
ttcaagaggatgaggttccccccgtttgatgatgaagagccccctctggattatgctgat
aacatcctggatgtggagcccctggaagccattcagctggagctggatccagaggaggat
gcccctgtgctggactggttctatgaccaccagcctctgaaggacaacaggaagtatgtc
aacggctccacgtaccagcgctggcagttcaccctgcccatgatgtccaccctgtaccgc
ctggccaaccagctgctcactgacctggtggatgacaactacttctacctgtttgacctg
aaagcgttcttcacctccaaggcactgaacatggccattcctggaggtcccaagtttgag
cccctcgtcagagacatcaatctccaggatgaagactggaatgaatttaatgacatcaac
aaaatcatcatcaggcagcccatcaggacagagtacaaaatcgctttcccatatctgtac
aacaacctgccacaccatgtccacctcacctggtatcatactccaaatgtcgttttcatt
aaaacagaagatcctgacctcccagctttttacttcgatcctctgatcaaccccatttca
cacagacattctgtcaagagccaggaaccactgcctgatgacgatgaagagtttgagttg
ccagagtttgtggagcctttcctgaaggatacccctctctacactgataacacagccaat
ggcattgccttgctgtgggccccacgacccttcaatctgaggtctggcaggacccggaga
gctcttgacatcccactggtcaagaactggtaccgtgagcactgcccagcaggacagcca
gtcaaggtgagagtctcctaccagaagctcctgaaatactatgtcttgaatgcactcaaa
cacagacctcccaaggcccagaagaagaggtacctgttccgctccttcaaggctaccaag
tttttccagtcgaccaagctggactgggtggaagttggcctgcaggtgtgtcgccagggc
tacaacatgctgaacttgctgatccacagaaagaacctgaattaccttcacttggattac
aacttcaacctgaagcctgtgaagaccctcaccacaaaggaaagaaaaaaatcccgtttt
gggaatgctttccatctgtgccgagaggtcctgaggctgactaagctggtggtggacagc
cacgtccagtacagactgggaaatgtggatgcatttcagctggcagatggcctgcagtac
atctttgcccacgtgggtcagctcacggggatgtaccggtacaaatacaaactgatgagg
caaattcgaatgtgcaaggacctgaaacatctcatctactacaggtttaacacagggcct
gtgggcaaaggtcctggctgtggtttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcaccccactgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcgaagggtgtcgcaaagaccgtcacgaagcagcgcgtggagtctcac
tttgacctggagctcagggcagctgtgatgcatgacatcctggacatgatgccagaaggg
atcaagcagaacaaagccagaaccatcctgcagcacctgagtgaggcttggcggtgctgg
aaggccaatattccctggaaggtgccagggctgccaactcctattgagaacatgatcctg
aggtatgtgaaggccaaagctgactggtggacaaacacagctcactacaaccgggagcgg
atccgccggggagccactgttgacaaaactgtctgtaagaagaacctgggcaggctgacc
agactctacctgaaagctgaacaggaacgacagcataattatttgaaggatgggccttat
atcactgcagaagaggctgttgctgtgtacacaaccacagtgcactggctggagagcagg
aggttctctcccattcccttccccccactgtcctacaagcatgacaccaagttgctgatc
ttagccctggagaggctgaaagaagcttacagtgtgaaatcacgactgaatcagtcacag
agagaggagctgggcttaattgagcaggcttatgataatccccatgaagctctgtccaga
atcaagcgacatctgttgactcagagagccttcaaggaggtgggaattgagttcatggat
ctctacagccacttggtccctgtttatgatgttgagcccctggagaagatcacagatgct
tatctggatcagtacttgtggtatgaggctgataagcgaagactcttccctccttggatc
aaacctgctgacactgaaccacccccactgctggtgtacaagtggtgccaaggcattaac
aacctgcaggatgtttgggaaacaagtgaaggggaatgcaatgtgatgctggaatctcgg
tttgagaagatgtatgagaagattgacctgaccttgctcaacaggctgctgcgtctcatc
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctatgggattattcgtgggctgcagtttgcttccttcatt
gtccagtactatgggcttgtgatggacctgctggtgctgggcctgcaccgggccagtgag
atggctgggcctccccagatgccaaatgacttcctcagcttccaggacattgccacggag
gtggcccatcccattcgcctcttctgcagatacattgacaggattcacatcttcttcaga
tttacagcagacgaggcaagagacctgatccagcggtacctgacagagcacccagacccc
aacaacgagaacatcgtgggctacaacaacaagaagtgctggccccgggacgctcggatg
cgcctcatgaagcacgacgtgaacctcggccgtgctgtgttctgggatatcaagaaccgt
ttgccccgctcggtgaccacggtgcagtgggagaacagcttcgtgtccgtgtacagcaag
gacaaccccaacctgctgttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcaccagctacgaggagttcacccacaaggacggggtctggaacctgcagaacgaggtc
accaaggagcgcacggctcagtgcttcctgcgtgtggatgatgagtccatgcagaggttt
cacaacagagtgaggcagatcctcatggcctctggctccacaaccttcactaagattgtc
aataaatggaacacagctttgattggcttgatgacttatttccgggaagctgttgtaaat
actcaggagcttcttgatttgctggtgaagtgtgagaataaaatccagactcggatcaag
atcggcctgaattccaaaatgcccagccgttttcctcctgtggtgttctacacccctaag
gagctgggggggctgggcatgctctccatgggccacgttctcatccctcagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcatgag
gaggaccagctgatcccaaatctgtatcgttacatccagccatgggagagtgaattcatt
gactctcagagggtgtgggcagagtatgccctgaaacgacaggaggctatagcccagaac
aggcgtctgacactggaggatctggaggactcgtgggacaggggaattcctcggattaac
acccttttccagaaagaccggcatactcttgcctatgataaaggatggagagtcagaact
gacttcaaacagtatcaggtgctgaagcagaacccgttctggtggacacaccagcgccac
gatggcaagctctggaacctgaacaattaccgcacggacatgatccaggctctgggcggg
gtggaagggatcctggagcacacgctcttcaagggcacctacttccccacctgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaat
gcccagagatcgggtttgaaccaaattccaaacagaagattcactctctggtggtctcct
accattaacagagccaatgtgtacgttggcttccaggtgcagctggatttgacagggatt
ttcatgcatggcaaaatccccacgctgaagatttccctcatccagattttccgagctcac
ttgtggcagaaaatccatgagagcattgtcatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcaaaaagagacaatccatcccaggaagtcctac
aagatgaattcctcatgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatccttgctggcagattccaaggatgtgatggacagcaccaccacccagaagtac
tggattgacatccagctgcgctggggcgactacgactcccacgacatcgagcgctacgcc
agggccaagttcctggactacaccacagacaacatgagcatctacccctctcccactggg
gtgctcattgccattgatctggcctacaacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggccatggccaaaatcatgaaagcaaaccctgccctg
tatgtgttgagggaacgaatccgcaaagggctgcagctctactcctcagagcccacagaa
ccctacctgtcctcccagaactatggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaacgtgtacagagtcaccatccacaagacttttgaagggaatttgaccaca
aaacccatcaatggagccattttcatcttcaatcccagaactggacagctcttcctgaag
atcatccacacatctgtgtgggcaggacagaagcgtctgggacagctggccaagtggaag
actgctgaggaagtggctgccttgatccgatcccttcccgtggaggagcagccaaagcag
atcattgtgacacggaagggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcggagttgcagctgcccttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggccactgaaccccagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctacacagcattctcccgtctgatcctgattctc
cgggcgctgcacgtgaataatgatcgagccaaagttatcctgaagccagacaagacaacc
atcacagagcctcaccacatctggccaaccctgacagatgaggagtggatcaaggtggag
gtgcagctgaaggatctcatccttgctgactatggcaagaagaacaacgtgaacgttgca
tccctgacccagtcagagatccgagacatcatcctgggcatggagatctctgccccatcc
cagcagaggcagcagattgcagaaatcgagaagcaaaccaaggagcagtcgcagctgaca
gccacgcagacccgcacagtgaacaaacacggggatgaaatcatcacctccaccaccagc
aactacgaaacacagaccttctcctccaagacagagtggagggtcagagccatttctgct
gccaacctccacctgcggacaaaccacatctatgtctcatcagatgacataaaggagaca
ggttacacctacatccttcccaaaaacgtgttgaagaagttcatctgcatctcagacctg
cgagcccagattgcaggttacctgtatggagtgagccctccagacaacccgcaggtgaag
gagatccggtgcattgtgatggtgccccagtgggggacacaccagaccgtgcacctgcca
gggcagctgccacagcacgagtatctcaaggaaatggaacctctgggatggattcacacc
caaccaaatgagtcccctcagctctcaccacaggatgtcaccacccacgccaaggtcatg
gctgacaacccctcctgggatggggagaagaccatcatcatcacctgcagtttcacccct
ggctcctgcacgctgacagcctacaaactgaccccgagtgggtacgagtggggccggcag
aacacggacaaagggaacaatcccaagggttacctcccctcccactacgagagggtgcag
atgctcctgtccgaccgcttcctcggcttcttcatggtcccagctcagggctcctggaac
tacaacttcatgggtgtccgccacgaccccaacatgaagtacgagctgcagctcgccaac
cccaaggagttttaccacgaggtccatcgcccctctcacttcctcaacttcgcgctgctg
caggagggggaggtttactctgccgaccgcgaggatctctacgcctaa
DBGET
integrated database retrieval system
