Cyanistes caeruleus (blue tit): 111937838
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Entry
111937838 CDS
T05602
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03440
Homologous recombination
ccae03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111937838 (BRIP1)
03460 Fanconi anemia pathway
111937838 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111937838 (BRIP1)
Enzymes [BR:
ccae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111937838 (BRIP1)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
111937838 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
111937838 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
HBB
ResIII
DUF2703
ARCH_RTEL1
Motif
Other DBs
NCBI-GeneID:
111937838
NCBI-ProteinID:
XP_023795127
LinkDB
All DBs
Position
19
AA seq
1451 aa
AA seq
DB search
MPSDGAEYTIGGVKILFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQALYEKSVPTSSSDKEDRKAEPSPPCHCKCHSQPKSNEAAMSVTHSAPCSANYPDT
GTSRKPGSSLTNTECKENETLASKLSAKKKLSLHDSENDDFQVDRKRIRPLETEQQQVRK
RHCFAKGVQFVDALEVYNQRKNGELTVHSEKSMKTTTFSPQTPPGPCTECSCSSGKEPDK
DPSHTKKKENGDRLCVPKIFFGTRTHKQITQISRELKRTAYSCAPMTILSSRDYTCIHPV
VSNSSNRNEMCVELLEGKHGRSCSYYHGVHKLSEHHALQPASVYQAWDIEDLVSLGRKLR
ACPYFAARELMVGADIVFCPYNYLLDPQIRDSMDIKLKDQVVILDEAHNIEDCARESVSY
GVTESQLRAAREELDFMVNNNIRQKHHEPLRAVCCSLINWLQESSGQLVERAYETACKVW
SGKEMLNFLHQMGITGITFPILQKHLVAVLEKEEKVSMHGREELIGVPVVSPATQIVLKG
LFMVFSCLFKENSRFADDYKIALQQTYTWLTENQRDDADSSSFFTRPKHKKSSRQKTLVH
MLNFWCLNPAVAFSELNEVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHVIRNSQVWV
GTVGTGPNGRKLCATFQHTETFEFQDEVGALLLSVCQTIGQGILCFLPSYKMLDKLKDRW
MHTGLWRKLEDVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGEKDGALLVAVCRGKVSEG
LDFCDENARAVVTIGIPFPNVKDLQVELKRKYNDQHKSTRGLLSGSQWYEIQAYRALNQA
LGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQRIQHHGSFGSALESLHAFALRN
QRGGDPSSEHSTEFPAHSRDLSQGSQQEATLPLSPDVPAKSQEENLGSVHFTATISSVHP
TAWDQPSDSMAAVKQSDQEVDVESHSHHEKQRRKHMDNTPKIPAIKIETEKMNGWTNADT
VGENCCSEPLTSTPVAKNCRATTSSRQEHVNGPSDIIDHLNQCQSSSIAEHQPSGPESCL
DTTHFSVKNAETSGVEGHPGKLQLPAEPCREFPSAAGRAEPSALNVDEDEDESIYFTPEL
YDDADPEKQGTEAPLPACCTTGNWVEYGNSTVPADLFATNTSETQNVTDKAEAGRSPHGI
MENVRSRDSVVDDVEVAAAAGAEQGGSQEMDTPKRKISLSRSRNKGLKVRRRCSRRKAAF
RQSGSSRERKKETHNQPCRKGLYCVVCGAEILPKAQGILRKANYSNSELQIIWKLFRNAN
IRRKESINNCKCKLEAISEDDNVMLVISDAASLGHLKETLKVYQMPMKDLTGSLSLNAIW
NEKESSLTSYLQCRSCVLQSISPSPLIGAEVTHFSNKVQSWVWLLPSSVHYCLLLQNPPE
LKPGNLDYILS
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgatggggcagaatataccattgggggggtgaagatcctcttcccctgcaag
gcttacccctcccagcttgctatgatgaatgctattgttaaaggcttgaataacaggcag
cactgtttgctggagagccccacaggaagtggcaaaagcttggcattactttgttctgca
ttatcatggcagcaggctttgtatgaaaaatccgtgccaacctcatcgagtgacaaggag
gacaggaaagcagagccctccccaccatgtcactgcaagtgtcactcccagcccaagagc
aacgaggctgcaatgagtgtgactcacagtgctccttgttctgccaattatcctgacaca
ggaacttccagaaagcctggaagctcgctgacaaacacagaatgcaaggaaaatgaaaca
ctggcttcaaaactgtctgccaaaaaaaagttatcccttcatgacagtgagaacgatgat
tttcaagtagacaggaaaaggattcgtcctttagaaacagaacagcagcaggttagaaaa
cgtcactgctttgcaaaaggagtccagtttgttgatgctttagaagtttataatcagaga
aaaaatggagagctgactgttcactctgaaaaaagcatgaaaaccactactttttctccc
caaacacctcctggcccttgcactgagtgttcctgttcttctggaaaagaacctgataaa
gatcccagtcacacaaagaagaaagaaaatggagatcggttgtgtgttcccaagattttt
tttgggacacgaacacacaagcaaattacccagatcagcagggagctgaagaggacagcg
tattcctgtgcccccatgacaatcctttccagcagggattatacctgtattcatccagtg
gtgtccaacagtagtaacaggaatgaaatgtgtgtagaattgctggaaggaaaacatggc
aggtcctgctcttattaccacggtgttcacaagctcagtgagcaccatgccctgcagcct
gccagtgtgtaccaggcttgggacattgaagacctggtgagcctgggcaggaagcttcgt
gcctgtccctattttgcagcccgagagctcatggtgggggcagacattgtgttctgtcct
tacaattatctcctggacccacagatccgggacagtatggacattaagctaaaagaccaa
gtagtcattttggatgaagcccacaacattgaggactgtgctcgggagtctgtgagctac
ggggttaccgagagccagctccgggctgcccgagaggagctcgatttcatggtcaacaac
aacatcaggcagaagcatcatgagcccctccgagctgtgtgctgctccttgataaactgg
ttgcaggaaagctctgggcagctggtggagagagcctatgaaactgcctgtaaagtgtgg
agtggcaaagaaatgctcaactttttgcaccaaatgggaataactgggattacttttccc
attttacagaaacatcttgttgctgtcctggaaaaagaagaaaaagtgtcaatgcatggg
agagaggaacttattggggtgccagttgtgagccctgcaacacagatcgtgctcaaaggc
ctgttcatggtcttttcctgtctctttaaagagaacagcaggtttgcagatgattacaag
attgctctacagcagacttacacctggttgactgaaaaccaacgtgatgatgcagattca
agttccttcttcacgaggcccaagcacaaaaagagttcaaggcagaaaacccttgtccac
atgctaaatttttggtgcttgaaccctgctgtggctttctctgagttaaatgaagttaga
acaattgttctgacatcaggcacactctctcccatggattccttttcctcagagcttggt
gtgaagttttccattcagctggaggcaaatcatgttatccggaattcccaggtttgggtc
ggcacggtcggaacgggccccaatgggcggaagttgtgcgcaacgttccagcacacagag
accttcgagttccaggatgaggtgggagcactgctgctttcagtctgtcagacaattggc
caaggaattttgtgctttttgccatcctataagatgctggacaagttaaaggatcgttgg
atgcacactggcttgtggagaaagttggaggatgttaaaacagtcattgcagagccccag
ggaggggccaagagtgactttgatgagttgctgaaaatctactatgatgcaatcaaatgt
aaaggagagaaagatggagctctcctggtagctgtgtgcagagggaaggtcagtgagggg
ctggatttctgtgatgagaacgccagggcagtcgtgaccatcggaatcccctttccaaac
gtgaaggaccttcaggttgaattaaagaggaaatacaatgaccagcacaaaagtacaaga
ggccttttatcaggaagtcagtggtatgaaattcaagcttacagagctctcaaccaagcc
ctgggaaggtgtataaggcacaggaatgactggggggctctaattttagttgacgaccgc
ttcaggaataacccaaataaatacataactggattatccaagtggatccggcagcggatc
cagcaccacggcagtttcggcagcgctctggaatccctgcacgccttcgccctcaggaac
cagaggggtggggatccctcctcagagcacagcactgaattccctgcacattccagggac
ctctcacaaggctctcaacaagaggccacccttcctctgtccccagatgttcctgctaaa
agtcaggaggaaaatttgggctcagttcattttactgcaaccatcagctcagttcatccc
acagcatgggatcagccaagtgacagcatggcagcagtgaaacaaagtgaccaggaagtg
gatgtagagagccattctcaccatgaaaaacagagaaggaaacatatggacaacaccccc
aaaattccagcaattaaaatagagacagaaaaaatgaatggttggaccaatgctgatact
gtgggagagaattgctgctctgaaccactgacttcaactcctgtagccaaaaactgcagg
gccacaacaagcagcagacaggagcatgtgaatgggcctagtgacattattgatcattta
aatcaatgccaatcatcatcaattgcagaacatcaaccaagtggaccagaatcatgtttg
gacacaactcatttttcagttaaaaatgctgagacttcaggtgttgagggacatcctggt
aagctccagcttccagctgagccctgcagggagtttccttcagcagcagggagagctgag
ccttcagcattaaatgtggatgaggatgaggatgaaagcatttacttcaccccagagctc
tatgatgatgcagatccagagaaacagggaactgaagccccacttccagcctgttgtacc
actgggaattgggtggaatatgggaactccacagtccctgctgatctttttgctaccaac
acctcagaaacacagaatgtgactgacaaagctgaggctggcagaagtccccatggaatt
atggaaaatgtgaggagcagggacagtgtagttgatgatgtagaggtggcagctgcagca
ggagcagagcagggaggatctcaggagatggacacccctaaaaggaaaatcagcctttcc
agatcccgaaataaagggttgaaagttcggaggagatgcagcagaaggaaagctgccttt
aggcaaagcggctcctcccgagagagaaagaaggaaacacacaaccagccttgcaggaaa
ggactttattgtgttgtctgtggagctgaaatcctgcccaaagcacagggaattttgaga
aaagctaactacagtaatagtgagctgcaaataatctggaaactcttcagaaatgccaat
ataagacgtaaagaatccattaataattgtaagtgtaaactagaggccatttcagaagat
gataatgtgatgttggtcatctcagatgctgcaagtcttggtcaccttaaagaaactctg
aaggtttatcagatgccaatgaaagacctcactggcagtctatctttaaatgcaatttgg
aatgagaaggaatcttctctgacaagttacttgcagtgcaggagctgtgtccttcagtcc
atttctccaagccctttgataggagctgaggttactcatttcagtaataaagtgcagtca
tgggtctggctgcttccctcatctgttcattattgcttgctgctacagaaccctccagaa
ctgaaaccaggcaatttagattatattttatcttag
DBGET
integrated database retrieval system
