Cyanistes caeruleus (blue tit): 111938107 Help Entry 111938107         CDS       T05602                                  Symbol PRPF6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccae00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     111938107 (PRPF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ccae03041]     111938107 (PRPF6) Spliceosome [BR:ccae03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     111938107 (PRPF6)  Complex C    U5 SnRNP specific factors     111938107 (PRPF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N TPR_16 HAT_Syf1_CNRKL1_C Suf HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_17 TPR_2 TPR_8 ARM_TT21_2nd FAT TPR_CcmH_CycH TPR_1 T7SS_EccA1_N ARM_TT21_C ARM_TT21_5th TPR_21 MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  111938107 NCBI-ProteinID:  XP_023795462 LinkDB All DBs Position 20 AA seq 941 aa AA seqDB search MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM KKNQTADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT PVPDSFFAKHLQSGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT QMVEKIIDRAITSLRANGVQRNLHLWVQDAEECDKAGSVATCQAIMRAVIGIGIEEEDRK HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE QKELVEKAREAYNQGLKKCPHSIPLWLLLSRLEEKVGQLTRARAILEKSRLKNPKNPDLW LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRKTKSVDALKKCEHD PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR CENAEPRHGELWCDVSKDIENWQKKIGEILVLVAAKLKNTF NT seq 2826 nt NT seq  +upstreamnt  +downstreamnt atgaacaagaagaagaagccgttcctgggcatgcccgcgcccctgggttacgtgccgggg ctgggccgcggagccacgggtttcaccacccgctctgatatcggccctgcccgcgatgcc aacgaccccgtggacgaccggcacgctccgccaggcaagagaactgtgggggaccagatg aagaagaaccagacagcagatgatgatgatgaggatttgaatgacaccaattatgatgag ttcaatggctacgctgggagtctgttctcaagcggcccctatgagaaagatgatgaggaa gcagatgcaatttatgcagctttggataagaggatggatgaacgcaggaaggaaaggagg gaacaacgagaaaaagaggaaatagaaaagtaccgtatggaaagacccaaaattcaacag cagttctcagacttgaaacggaaattagcagaggttactgaggaggagtggctgagtatt cccgaggttggggatgccaggaacaagcggcagaggaatcctcgttatgagaagctgact cctgtccctgacagcttctttgcaaagcatttgcagtcgggggagaatcacacttctgtg gacccacgccagacacaatttggtggactgaatactccgtatccaggaggtttgaatact ccatacccaggaggaatgacaccaggcttgatgacacctgggacaggtgaattggatatg aggaagattggtcaagccaggaacaccttgatggatatgagactcagccaggtatcagac tctgtgagcggccagactgtagtggacccaaaaggatatttgacagacttgaactccatg attcccacacacggaggagatatcaatgatatcaaaaaagcccgtttgctcctgaaatct gtccgagagaccaatcctcatcatccaccagcctggatagcatcagcccgactggaggag gtcactggcaaactccaggtggctcgaaatctcatcatgaaaggaacagagatgtgccct aagagtgaagatgtttggttggaagctgctcggcttcagcctggagatacagccaaggct gttgtggcgcaggctgtgcggcacctgccacagtccgtgcggatctatatcagagcagca gagctggagacagacatccgtgccaagaaacgtgtccttaggaaagccctcgagcacgtt ccaaactcagtgcgtttgtggaaagcagccgtggagctggaggaacctgaggatgccagg atcatgctgagccgggctgtggagtgctgtccaaccagtgttgaactgtggctggcgctg gcaaggctggagacatatgagaatgctcgtaaagtccttaacaaagcccgggagaatatc ccgacagatcgtcacatctggattactgctgccaaactggaggaagccaatggaaacacc cagatggtggagaaaattattgacagagccatcacatctcttagggctaatggtgtgcag aggaatttgcacttgtgggtgcaggatgccgaggaatgtgataaagctggaagtgtggcc acgtgccaggcaatcatgagagctgtgattgggattggcatcgaggaagaagatcggaaa cacacctggatggaagatgcagacagttgtgttgctcataatgccctggagtgtgcccga gccatttatgcctatgccttgcaagtcttcccgagcaagaagagcgtgtggctgcgagca gcctactttgaaaagaaccatggaaccagagaatccttggaggctcttttgcagagagct gttgctcactgtcccaaagcagaggtgctgtggctcatgggagccaaatccaagtggctg gcgggagatgtgccagcagccagaagcatcttggccctggctttccaggccaaccccaac agcgaggagatctggctggctgccgtgaagctcgagtcagagaacaatgagtatgaaaga gcgaggaggctgctggcaaaggctcgcagcagtgcccccactgcaagggtcttcatgaag tctgtgaagttggaatgggtgcttgggaacattgctgcagcccaggagctctgtgaggaa gccctgaagcactatgaggacttccccaaactgtggatgatgaaaggacaaattgaggag caaaaagagctggtagagaaagcacgggaggcttataatcaagggttgaagaagtgcccc cattccatacccctgtggctcttgctgtccaggctggaggagaaagttgggcagctgact agagcaagagccatcttggaaaagtctcgcctgaagaatccaaagaatccagatctctgg ttggaatctgtgcgcttggagtaccgagctgggctgaagaacattgcaaacactctgatg gccaaagcactgcaagagtgccccaattcaggaatcctgtggtcagaagcaattttcctt gaagcgcgaccgcaacgaaagaccaagagtgtggatgctctcaagaagtgtgaacatgac ccacatgtcctgctggctgtggccaagctgttctggagcgagcgtaaaataaccaaggcc agagagtggttccaccgcacggtgaagatagactcggacctgggggatgcctgggccttc ttttacaaatttgagctccagcatggcacagaggaacaacaagaagaggtaaggaagcgc tgtgagaatgctgaacctcgccacggagagctctggtgtgatgtctccaaggacatagag aattggcagaaaaagattggagagattcttgtgcttgtggcagccaagctgaaaaatacc ttctag

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