Cyanistes caeruleus (blue tit): 111938352
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Entry
111938352 CDS
T05602
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03250
Viral life cycle - HIV-1
ccae04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111938352 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
111938352 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111938352 (SAMHD1)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
111938352 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
PDEase_I
HD_assoc_2
Motif
Other DBs
NCBI-GeneID:
111938352
NCBI-ProteinID:
XP_023795799
UniProt:
A0A8C0UGZ3
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All DBs
Position
20
AA seq
621 aa
AA seq
DB search
MPGMAYTIFFISFMVVLFLSFQRSTYTALQICSDFRRINAFNIFLKKLQLLSSSVKEYQS
NVNSHKSFHTYCKLKREVHCRFGSQCLFFFPSCPAERLEVLACLTQLRPQHVEVMKVFND
PIHGHIEFHPLLIQIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYLAGCLVR
TLKERQPDLGITQRDILCVEIAGLCHDLGHGPFSHMFDGRFIPLTRPDLQWKHETASVQM
FEHLITSNKLEEVMESHGLVLEEDMLFIKEQIGGPIDETACVKSWPYRGRPKEKSFLYEI
VANKKNGIDVDKWDYFARDCHHLGIPNNFDYKRLLIFTRVCEVKNQKHICTRDKEVGNLY
EMFHTRNCLHRRAYQHKTGNIIEIMITEAFQKADKFFEIRGSGGKVYRISTAMEDMEAYT
KLTDCIYLEILNSSHPELEEARKILRKIERRELYKFLGETRPESKTEIVKSNSLAESIAN
SKPQKDPPDVDLKAENFIVDVISMDYGMKEQNPIDKVHFYCKADPSKAVKISKEQVSKLL
PIIFMEQVVRVYYKSQDPRIISAAKQYFVQWCMENDFTKPQDGDVVAPHLTPMKETWNNV
TDDEHRRASEPSCKQRLSFDE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtatggcttacacaatttttttcatcagtttcatggtggttttatttctcagt
tttcagagaagcacttacactgctctacagatatgttctgattttagaaggataaatgct
ttcaatatttttctgaaaaagttgcagttgctgtcttcttctgtcaaggaatatcaaagt
aatgtgaactcacataagtcattccatacgtactgcaaattgaaaagggaagtgcattgc
agatttggctctcagtgtctctttttctttcctagctgcccagctgagcgactggaagtg
ctggcgtgcctgacgcagctgcggccgcagcacgtggaggtgatgaaggtttttaacgat
cctattcatgggcacattgaatttcatcccctgcttattcagatcatcgacacccctcag
ttccagcgcctccggtacatcaagcagttgggtggcacgtactttgtttttccaggagcc
tctcacaaccgctttgaacactccctgggggttggctaccttgcaggatgtctggttcgt
acactgaaggagagacaaccagacctgggtataacccagcgtgacatcctctgtgtagaa
attgctgggctttgtcacgatttgggtcatgggccattttcacacatgtttgatggaaga
tttattccactcactcgtccagatttgcagtggaagcatgaaactgcgtctgttcaaatg
tttgagcacttgatcacttccaataaactagaagaagtcatggaatctcatggtcttgtt
ctggaggaagatatgttgttcatcaaggaacagataggagggcctatagatgaaactgcc
tgtgtgaaatcgtggccctaccgtggtcgtccaaaggagaaaagtttcctctatgagatt
gtagctaataaaaaaaatggcattgacgttgacaagtgggattattttgcaagggattgc
caccacctgggaatcccaaataattttgactataagcgattgcttatcttcactcgggtc
tgtgaagtgaaaaaccagaagcacatctgtactcgtgataaggaagttggaaatttgtat
gagatgttccacacccggaactgcctgcaccggagagcataccagcataagactggcaac
atcattgaaataatgataacagaagcttttcaaaaagccgacaaattttttgaaataaga
ggctctggaggaaaagtgtatcggatttctacagcaatggaggacatggaagcctacact
aagctaactgactgtatctacctggaaattcttaactcaagtcatccagaactggaagag
gcacgaaaaattttgcgtaaaatagaacgacgtgaattatacaagtttttaggagagact
cgacctgaatccaagacagaaattgtaaagagtaatagcctggcagaaagcattgctaat
agcaagccacagaaggaccctccagatgtggatctaaaggctgagaatttcatagttgat
gttatcagcatggattatggaatgaaggaacagaatccaattgataaggttcacttctat
tgcaaggccgatccttccaaggcagtcaaaatcagtaaagaacaggtttcaaagctttta
cccataatatttatggagcaggttgtccgggtttattacaaaagtcaggatccacgtatt
atttcagctgcaaaacagtactttgttcagtggtgtatggagaatgatttcaccaaacca
caggatggtgatgttgtcgctcctcatctaactccaatgaaggaaacctggaataatgtg
acagatgatgaacacaggagagcctcagagcccagctgcaaacaaaggctttcttttgat
gagtaa
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