Cyanistes caeruleus (blue tit): 111938365
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Entry
111938365 CDS
T05602
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccae03041
]
111938365 (RBM39)
Spliceosome [BR:
ccae03041
]
Common components
Common spliceosomal components
General mRNP proteins
111938365 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
111938365
NCBI-ProteinID:
XP_023795837
UniProt:
A0A8C0ZB58
LinkDB
All DBs
Position
20
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVTDLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagtcatgacagaaagaggagtagaagtaaggaacgcaaacggagccgagat
cgggaacggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccggtctaggagtagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgtcgctccagaagcaaaagtcctttcagaaaagacaaaagccctgttagagaa
cctattgataatcttacccctgaagagagggatgctcgaacagtgttctgtatgcagttg
gctgcaagaattcgaccaagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcagatagaaattccagacgttcaaagggaattgcgtatgttgaa
tttgttgatgttagttcagtgcccctggcaataggactgactggacagagagtcctgggt
gtacctatcatagtacaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctacagaagggcagtgctggtcctatgaggctctatgtgggatcattacacttcaac
ataactgaagatatgcttcgaggaatcttcgagccatttggcaggattgaaagtattcag
ctcatgatggacagtgaaactggacgctcaaaaggatatggattcattacgttctcagac
tctgagtgtgccaaaaaggccctggaacaactcaatggatttgagctggctgggaggcca
atgaaggtcggacatgtaactgagcgtactgatgcttccagtgctagctcatttttggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagctgatg
gcaagacttgcagaaggtactggtttgcagattcctccagctgcacagcaggctctgcag
atgagcggatctttggcctttggagctgtgacagatttgcaaacaagactgtctcagcag
aatgaagttctggctgcagctgcttctgtacagccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggacacagaaattaaagat
gatgtgattgaggaatgtaacaaacatggaggagttatccacatctatgttgacaaaaat
tcagctcagggcaatgtgtatgttaaatgtccttccatcgctgctgccatcgcagctgtc
aatgctttgcacgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacataccacagccttttcccagactctatgactgcaacccaactactggttcctgtt
cgacgatga
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