Cyanistes caeruleus (blue tit): 111938411
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Entry
111938411 CDS
T05602
Symbol
STAU1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccae01009
]
111938411 (STAU1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111938411 (STAU1)
Protein phosphatases and associated proteins [BR:
ccae01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111938411 (STAU1)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111938411 (STAU1)
mRNA cycle factors
Stress granule specific factors
111938411 (STAU1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Staufen_C
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
111938411
NCBI-ProteinID:
XP_023795899
LinkDB
All DBs
Position
20
AA seq
712 aa
AA seq
DB search
MSQVQIQNPSAALAGSQILNKNPSLSQPLSIPSTTSSLPSENAGRPIQNSALPSASVTST
SAAAAPSNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKVFTVQLTLGDQHWE
AEGTSIKKAQHAAAAKALEGTKFPKPTARPSRSEGKNPDSVTPTVELNALCMKLGKKPMY
KPIDPYTGMRSTYSYTMRGGTYPPRYFYPFPVGPLLYQVELSIGGQQFHGKGRTRQAAKH
DAAAKALKVLQNEPLPEKPEVNGKEPDDENLNKSEISQVFEIALKRNLPVNFEFFPLKQV
TKESGPPHMKSFVTKVSVGEFMGEGEGKSKKISKKNAAIAVLEELKKLPPLPTVEKMKPR
IKKKTKSIVKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYMLITERGLPRRREFVMQVK
VGIHTAEGMGTNKKVAKRNAAENMLEILGFKVPQPQPPKPALKTEEKTPVKKTGDGRKVT
FFEPGSEETSARGLSNSSSSACTSLLPGNKEDEFRMPYLSHQQLPAGILPMVPEVAQAVG
ANQGHHTKEFSRAAPNPAKATVTAMIARELLYGGTSPTAETILKSSNSSGHVPHGPLTRP
SEQLDYLSNVQGIQVEYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNI
LKLLSELDQQTTEMPRTGNGPMSVCVKQEMESDPLLKPASASPLGQTLDSTA
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagttcagattcagaatccttctgctgcccttgcagggagccaaatactgaat
aaaaacccatctctttcacagcctttgagtattccttctactaccagttctttgccctct
gaaaatgcaggcagacctatccagaattctgctttgccttctgcttcagttacatccacc
agtgcagctgcagctccttcaaacatggcaaaccccaaagagaaaacccccatgtgtctt
gtgaatgaattagcccgtttcaacaagattcagcctgagtataagcttctgagtgagcaa
ggtccagctcattctaaggtgtttacagtgcagctgactcttggggaccagcattgggaa
gctgaaggaactagtattaaaaaagcgcaacatgcagcagctgccaaagctttggaaggg
acaaaattccctaaacctacagctcgtccatctcgtagtgaaggcaagaatccagacagt
gtcacccctacagtggagctgaacgcactttgcatgaagctggggaagaagcccatgtac
aaacccatcgacccttacacggggatgagatccacctacagctacaccatgcgaggcggt
acctaccccccgcggtacttttacccatttcctgttggacctttactttatcaagtggag
ctttcaattggagggcagcagtttcatgggaagggaagaacaagacaagcagctaagcat
gatgcagctgctaaagctctgaaagttctgcagaatgagcccttgcctgagaaaccagag
gttaacggaaaagaaccagatgatgaaaatctcaataaatctgaaataagccaagttttt
gagattgcacttaaaaggaacttgcctgtgaattttgagtttttccctctgaaacaggta
accaaggaaagtggtcctcctcatatgaagagttttgtaaccaaggtatcagttggagaa
ttcatgggtgaaggtgaaggaaagagcaagaagatctcaaagaaaaatgctgcaatagca
gtcctagaagaactgaaaaaattgccaccccttcctacggttgagaaaatgaagccacga
atcaaaaagaaaacaaaatcaatagtgaagctgcaaacaagtccagagtacggtcaagga
atgaatcccattagcagacttgcccagatacagcaggccaagaaggagaaggaacccgag
tacatgctcatcacagaacgtgggctccccaggcgcagggagttcgtcatgcaggtgaaa
gttggtatacacacagctgaaggaatgggcacgaacaaaaaggttgctaaacgtaatgca
gctgaaaatatgttggaaattttaggtttcaaagtccctcaacctcagcctccaaaacca
gcattaaagacagaagagaagaccccagtgaagaaaacaggtgatggaagaaaagtaacc
ttctttgagccgggctctgaagagacttcagctagaggactgtcaaacagcagctcttca
gcgtgcacctctctcctcccaggtaataaagaagatgagtttaggatgccttatctcagc
catcagcagcttcctgctggaattcttcccatggtccctgaggttgcacaggctgtagga
gccaatcaaggacaccacaccaaagagttcagtcgggcagctcccaaccccgccaaggcc
acggtgacggcaatgatcgccagggagctgctctatgggggcacttctcctactgctgag
accattctgaagagcagcaactcctcaggccatgtcccccatgggcctctaaccaggccc
tccgagcagctggactatctttccaatgttcaaggaatccaggttgaatataaagacttt
ccaaaaaataacaagaatgagtttgtatctcttataaactgttcctctcagccaccactg
atcagtcatgggattggaaaggatgtggagtcttgccacgacatggctgcactgaatatt
ttaaagttgctgtctgagttggaccaacaaaccacagagatgccaaggacaggaaatgga
ccaatgtctgtatgtgtgaaacaagaaatggaaagtgaccctctcctcaaaccggcaagc
gcaagccctttgggacaaacactggacagcactgcctga
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