Cyanistes caeruleus (blue tit): 111938577
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Entry
111938577 CDS
T05602
Symbol
EXOSC10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111938577 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111938577 (EXOSC10)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111938577 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
111938577
NCBI-ProteinID:
XP_023796120
LinkDB
All DBs
Position
21
AA seq
900 aa
AA seq
DB search
MAAAAREESPPVRAGASWMPAGTEGSSTMSTLPGFDNPDAFVKYALGTVVAATKASNGLP
QPGDEYDFYCSFPGFRAYCSTQGDRLLHCMSQVMQYHGCRSLMKDSSKVTGLEDKFDMLV
DSNDVILERVSILLDEAAGVNRNKQPVMPSGLQPPQMIVSSWNRKAGEFHKRTQSETFRL
LHAKNISRPQLKFREKIDNSNTPFVPKLFVKPNALKPLPEALTKSGRQRKERPEDLDVPA
ALADFIHQQRTQKTEQDMFAHPYQYELEHFSPPDGVLKKPELQMYRPIEETPCHFITTLD
ELVELNEKLMTCKEFALDLEHHSYRTFLGLTCLMQISTRTEDFIIDTLELRSDMSILNET
FTDPAIVKVLHGADSDVEWLQRDFGLYLVNVFDTHQAARLLNLGRHSLDHLLKLYCSVDA
DKKYQLADWRIRPLPEEMIRYARDDTHYLLYIYDKMRELLWERGKEQPTQLQVVWQRSRD
ICLKKYIKPLFTDESYLDLYRRQKKHLDTQQLAAFRLLFAWRDKIARQEDESTGYVLPNH
MLLKIAEELPKETQGIIACCNPVPPLVRQQIHELHLLIQQAREMPLVKSEAISAVKKRAV
LPNPEKLENALFGPHDSSRIPMDNFQNNSALDPAPVLEDVCLFSESERTVDIQDTQPESE
SACLIAISTVSIFSECDENEGNKRTLTTAQRKAQLIMESFENPFKMFLPPEENSAYVSQS
AKFDPSSKIYEISNRWKLMSQAPVQKKSKNETNTKAAQQSAAHVQTQKLHKKPAQNVVSV
RQQAMEEQANRKRERDRSEMGAETGAELPAQEKKRQKTPQKPEELEAPRQFTPFDYSNSN
LKVFAGSSKSKQSPQFDPAKQAYTGKKFAGGNKLQQSGNRSMSYLAGKAERGSTHHWPKR
NT seq
2703 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgcccgtgaggagagcccgccggtgcgggcgggcgcctcctggatgccc
gcgggcactgagggaagcagcacgatgtcgaccctgcccgggttcgacaaccccgacgcc
ttcgtcaagtatgctctcggcacagtggtggcagcaacaaaagcatctaatgggcttccc
cagcctggtgatgagtatgatttctactgcagcttccctgggttccgtgcatactgcagc
acgcagggagaccgcctgctccactgcatgagccaggtgatgcagtaccatggctgccgg
agcctcatgaaagattccagcaaagtgacggggctggaagataaatttgatatgctggtg
gactccaatgatgtcattcttgaaagagtgagcattttattggatgaagcagcaggagtg
aatagaaacaagcagccagttatgccatctgggttacagcccccacagatgatcgtttcc
agctggaaccgtaaggcaggagaattccacaagagaactcagtctgaaacattccgacta
cttcatgccaaaaatatttctcgaccacagcttaagtttcgtgaaaagattgacaattcc
aacactccctttgtacctaaactttttgtcaaaccaaatgctttgaagcctttgcctgaa
gcccttacaaaaagtggacggcagagaaaggagcgccctgaggacttggatgtgccagct
gctttggcagacttcatacatcagcagaggacccagaaaactgagcaagacatgtttgct
cacccttaccagtatgaactggagcatttttctccaccagatggagttctcaagaaacct
gaactccagatgtacaggcccattgaggaaacaccctgtcattttatcaccacactggat
gagctggtagaactaaatgaaaagctgatgacttgtaaagaatttgccttggacttagag
caccactcctacaggaccttccttggcttgacatgtctgatgcagatttccacccgaaca
gaagacttcatcattgacaccctggaactccgcagtgacatgagcatcctcaatgagacc
ttcacagaccctgcaattgtgaaggtccttcatggtgctgattcagatgtggaatggctg
cagagagactttggtctgtacttggtgaatgtgtttgatactcaccaagctgctcgtctc
ctcaaccttggcagacattctttggaccacttgctaaagctgtattgcagtgtagatgct
gacaagaagtaccagctggctgactggaggatacgccctctgccagaagaaatgatccgc
tatgcccgtgatgacactcactacttgctttacatctatgataaaatgagggagttgctg
tgggagagagggaaggagcagcccacacagctgcaggttgtgtggcagcgcagcagggac
atctgcctgaagaaatacatcaagcccctctttacagatgaatcctaccttgatctctac
aggaggcagaaaaaacatcttgatacccagcagctggcagcatttaggctgctgtttgca
tggagagacaagatagcacgtcaagaggacgagagcacaggatacgtgctaccaaatcat
atgctgttgaagattgcagaggagctgcccaaagaaacccagggtatcattgcttgctgt
aaccctgtcccaccacttgttcgccagcagattcatgaattgcacctgctcattcagcag
gcccgggagatgcctcttgtcaagtcagaagctatttcagcagtcaagaagagagcagtt
ctacccaaccccgagaaactggagaatgccctctttggaccacatgacagttcacggatt
cctatggataattttcagaataactctgccttggaccctgcaccagttttggaagatgtt
tgtctcttttcagagagtgagaggacagtggatattcaagatactcagccagagtctgag
tcagcctgtcttattgctattagcactgtcagcatattcagtgaatgtgatgaaaacgaa
ggaaataagaggactttaaccactgcacagcggaaagctcagctaataatggaatccttt
gaaaatccatttaaaatgtttctgcctccagaggagaattctgcctatgtctcacaatct
gcaaagtttgacccatcatcaaaaatttatgaaatcagcaatcgatggaagctgatgagt
caggcaccagtacagaagaagtccaagaatgaaaccaatacaaaagcagcccagcagtca
gctgcccatgtccagacacagaagttgcataaaaagccagcacagaatgttgtatctgtt
cgtcagcaagccatggaggaacaagcaaataggaagagggagagagacagaagtgaaatg
ggagcagaaacaggagcagagttgccagcacaagaaaagaagcgacaaaaaaccccccag
aaaccggaggagctggaagcaccgaggcagtttaccccctttgattacagcaattccaac
ttgaaagtgtttgcaggaagcagcaaatcaaaacagtcaccacagtttgatcctgccaag
caagcttacacaggcaagaaatttgctggaggtaacaaacttcaacagtctgggaaccgg
agcatgtcctacctggcagggaaagctgaaaggggttccacgcatcactggccaaagaga
taa
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