Cyanistes caeruleus (blue tit): 111938598
Help
Entry
111938598 CDS
T05602
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111938598 (CHD5)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
111938598 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
ResIII
HDA2-3
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
111938598
NCBI-ProteinID:
XP_023796158
LinkDB
All DBs
Position
21
AA seq
1967 aa
AA seq
DB search
MVSTVSYTCAVCPCKLSLLFPEEDDGVLEGLDEFFAEDQIVVQKKKKSKKLKDGKAAKIK
RRKKEGSNDEMSENEEEIEEKSESEGSDYSPNKKKKKKLKDKKEKKPKRKKKDEEEDDNE
DGGLREPKSSAQLMEEWGLDDVDYVFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKM
MTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVSIAPALPASPQHSALPTVIRKAKT
KEGKGPGVRKKIKGSKDGKKKGKGKKMGGLKFRFGGIPSKRKKGSSSEEEEREESDFDSA
SINSSSMRSECSAGLGKRGKKRKKKKRIEEGDGYETDHQDYCEVCQQGGEIILCDTCPRA
YHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKEEEEEEEDGGEEEEDDHMEFCRVCKDG
GELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWAWKEPPAAAL
PAALPAPXXXXXXXAPDPELAVPPPKVLEGIPEREFFVKWAGLSYWHCSWVKELQLELYH
TVMYRNYQRKNDMDEPPAFDYGSGDEDSQREKRKNKDPQYAKMEERFYRYGIKPEWMMIH
RILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDDIDIPYYENLKLLYWNHRELMLGEDTRP
LKKLNKKGKKLKEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSW
AQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDF
YVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEAQIKFHVLLTSYELITIDQAV
LGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTP
ERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQM
QKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYD
GNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGIT
GGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAH
RIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKF
GTEELFKDDVEGMVSQGQRIAMPDAVTPFSDTLSTKGGAATPGMKKKHGGTPPGDNKDVD
DSSVIHYDDAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIK
QEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQEDQEWQDELSDNQS
EYSIGSEDEDEDFEERPEGQSGRRQSRRQLKTDRDKPLPPLLARVGGNIEVLGFNARQRK
AFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGV
PREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVLEGPESKRSSEVVSSDPNTP
VPASPAHTHTGPGALTDKTEAQLGFHEEKDPVEQKPRKVSDSQVPASAEVESEEHPESCD
SKERPREEKQEDCEKAEPSSEPLVKGLFPPADEGIQEQEKPLEKAELSSSPGKGEDKEVK
PEDGKEEEKEPSDAQQNGDKEEEEEGKKDDRSMNFRFMFNIADGGFTELHTLWQNEERAA
MSSGKIYDIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYVILNEPFKSEIHKGNYLEMKN
KFLARRFKLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNARLAEVECLAESHQHLSKES
LAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLATR
GGDPAAQGSFGSAQIFNNNFGPNFRGPGPGGIVNYSQMPLGPYVTDI
NT seq
5904 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcacggtgtcctatacctgtgcagtctgtccatgcaagctgtcccttttgttc
ccagaagaagatgatggggtgctggaaggattggatgagttttttgcagaagaccaaatt
gtggtacagaaaaagaagaaatccaagaagttgaaagatggcaaggctgccaaaatcaag
aggaggaagaaggaggggagcaatgatgaaatgtcagaaaatgaagaggagatcgaggag
aaatcagaaagtgaagggagtgactattctcccaacaaaaagaagaagaaaaaactgaaa
gacaagaaggagaaaaagccaaaacggaagaagaaggatgaagaggaggatgacaatgag
gatggaggtttaagggagcccaagagctcagcccagctcatggaggaatggggtctcgat
gacgtagattacgttttctcagaagaggattatcatactttgacgaattacaaggctttc
agccagttcctcaggcccctgattgccaagaagaaccccaagatccccatgtccaagatg
atgacggtgctcggtgccaagtggcgagagttcagtgccaacaaccccttcaagggcagc
tcggcggcggcggctgcggcagctgttgctgcagctgtggagactgtcagcatcgccccg
gcgctccccgccagcccccagcactctgccctgcccaccgtcatcaggaaggccaagacc
aaggaggggaagggtccaggtgtacggaagaaaatcaagggctccaaagatgggaagaaa
aaggggaaagggaaaaagatgggaggcttgaaattccggtttggaggaatccccagcaaa
aggaaaaagggctcctctagcgaagaggaggaacgggaagaatccgactttgacagcgcc
agcatcaacagctcctccatgcgctccgagtgctcggctggcctggggaagagagggaag
aagaggaaaaagaaaaagaggatcgaagagggggacgggtacgagacggaccaccaggac
tactgtgaggtgtgccagcagggcggggagatcatcctgtgcgacacctgcccccgcgcc
taccacctggtctgcctggaccccgagctggagaaggcccccgagggcaagtggagctgc
ccccactgtgagaaggagggcatccagtgggagccaaaggaggaggaggaggaggaagag
gatggtggtgaggaggaggaggatgaccacatggagttctgccgggtctgtaaggatgga
ggggagctgctgtgctgtgacacctgcccgtcctcctaccaccttcactgcctgaacccg
ccgctgccagagatcccaaacggtgaatggctctgcccacgctgtacatgccctcccttg
aagggcaaagtccaacgcatcctgcactgggcctggaaggagccgccggccgcggcgctc
ccggccgcgctgcccgccccggnnnnnnnnnnnnnnnnnnnngccccggaccccgagctg
gctgtgcccccaccgaaggtgctggaggggatcccggagcgcgagttctttgtgaagtgg
gcaggcctctcctactggcactgctcctgggtgaaggagctgcagctggagctctaccac
accgtgatgtaccgcaactaccaacggaagaacgacatggatgagccaccagccttcgac
tacggctctggggacgaggacagccagagggagaagcggaagaacaaggacccccagtat
gccaagatggaggagcggttctaccgctatggcatcaagcctgagtggatgatgatccac
cgcatcctgaaccacagctttgataaaaagggagacatccattacctgatcaagtggaag
gacctgccctatgaccagtgcacctgggagatcgatgacatagacatcccttactatgag
aacctcaaactcctctactggaaccacagggagctgatgctgggggaggacacacgccct
ctgaagaagctgaacaagaaagggaaaaagctgaaagaggagaagctggaaaagcctcca
gaaacacctcttgtggatcctacagtgaagtttgacaagcagccgtggtacattgatgcc
acgggaggcacgctgcacccttaccagctggaagggctgaactggctgagattctcctgg
gcacaaggaacagatacaatcctagctgatgaaatggggctagggaagacagtgcagact
attgtgttcttgtattccctgtacaaggagggccactcgaaaggaccatacctagtcagt
gcccccctctccaccatcatcaactgggagcgtgagtttgagatgtgggcacctgacttc
tacgttgtgacctacacgggggacaaggagagccggtcggtcatccgggaaaatgagttt
tcttttgaagacaacgccatccggagcgggaagaaggtcttccggatgaagaaggaagcc
cagatcaagttccatgtcctgctcacgtcctatgagctgatcaccattgaccaggcagtg
ctgggctccatagagtgggcttgtctggtggtggatgaagcacacaggctgaagaacaac
cagtccaaattctttagagtactgaatagctacaagatcgattacaagctgcttctcaca
gggactccactccagaacaacttggaagagctctttcacctgctcaatttcctgactcca
gagaggtttaacaacctggaggggttcctggaggagtttgcagacatctccaaggaggac
cagatcaaaaagctccatgacctgctgggtccccacatgctgcggcggctcaaggccgat
gtgttcaagaacatgccagccaagacagagctgatcgtgcgagtggagctgagccagatg
cagaagaagtactacaaattcatactgacaaggaactttgaagccctgaattctaaaggt
ggtgggaaccaggtctcactgctcaacatcatgatggacctgaagaagtgctgcaatcac
ccatacctgttccctgtggcagccgtggaggccccagtgctgcccaatggatcttatgat
gggaattctttggtcaaatcttctgggaaactgatgctgctccaaaagatgctgaagaag
ttacgggatgggggtcacagagttctgatcttctcgcagatgacaaagatgctggatttg
ctggaggatttcctggagtacgaaggctacaagtacgagcggatcgacgggggcatcacc
ggcggcctgcgccaggaggccatcgacaggttcaatgctcctggggctcagcagttctgc
ttcctcctctccacccgtgccggtggtctgggcataaaccttgctacggccgacactgtc
attatttatgattctgactggaatccccacaatgacatccaggcgttcagcagagctcac
cgcatcgggcagaacaagaaggtgatgatttaccgcttcgtgaccagggcctctgtggag
gagcgcatcacccaggtggccaaaaggaagatgatgctcacccacctggtggtccgcccg
gggcttggctccaagtcgggctccatgaccaagcaagagctggatgacatcctcaagttt
gggacagaagaactcttcaaagatgatgtggagggcatggtgtctcagggacagcggatt
gccatgccagatgctgttacccctttctccgacacactgtcaacaaaagggggtgcagca
acccctggcatgaaaaaaaagcatggtggcaccccaccaggtgacaataaggatgtggat
gacagcagtgtgatccactatgatgatgctgccatctctaagcttttggaccgaaaccaa
gatgcgactgatgacacagagctgcagaacatgaatgagtatctcagctcctttaaagtg
gctcagtatgttgtgagagaagaggatggtgtggaggaggtggaacgggagatcatcaaa
caagaggagaatgtggaccctgactactgggagaagctgctgcggcaccactatgagcag
cagcaggaagacctggccaggaacctgggaaaagggaagagaatccgcaagcaggtcaac
tacaatgacacctctcaggaggaccaagagtggcaggacgagctctctgacaaccagtca
gagtattccattggctctgaggatgaggatgaagactttgaagagaggccagaaggccag
agtggcagaagacaatcccggagacagctgaagactgacagagacaaacctctccctcct
ttgctggcaagagttggggggaacatcgaggttctgggcttcaacgcccggcagcgcaag
gcgttcctgaatgccatcatgcgctggggaatgccaccccaggatgccttcaactcccac
tggctggtccgggatctgcgagggaagagcgagaaggagttcagggcgtatgtctctctc
ttcatgagacacttgtgtgagcctggggcagatggtgctgaaacctttgcggacggcgtt
ccccgggaagggctgtcacgccagcacgtgctgactcgcattggggtcatgtcactagta
aggaagaaggtccaggagtttgagcatgtcaatgggaagtacagcaccccagacctggtt
cttgaaggcccagagagcaagagatccagtgaggttgtgtcttcagatcccaacacgcct
gtcccggccagtccagcgcacacacacacaggaccaggggcccttacagacaaaacagaa
gcacaactggggttccatgaggaaaaggacccagtggagcagaagcccagaaaggtgtct
gacagccaggtgcctgcaagtgccgaggtggagagcgaagagcacccagaaagctgcgac
agcaaggagaggccaagggaagagaagcaagaggattgtgagaaggctgagccttcttct
gagcccctggtgaaaggcctatttcctcctgcagatgaggggattcaagagcaagagaag
cctttggagaaggcggagttgagcagcagcccagggaagggggaggataaagaagtcaaa
ccagaggatggcaaggaggaggagaaggagccaagtgatgcccagcaaaatggtgacaaa
gaggaagaggaggaaggaaagaaggatgacagaagcatgaatttcagattcatgttcaac
attgctgacggtggcttcacagagttgcacacgctgtggcagaatgaggagagggctgcc
atgtcctctggcaagatctacgacatctggcaccgccgacacgactactggctgttggca
ggaattgtcactcatggctatgcccgctggcaggacatccagaatgacccacgctacgtg
atcctgaacgagcccttcaagtcagagatacacaaggggaattaccttgagatgaagaac
aagttccttgcccggcggtttaagttgttggagcaggccctggtgatcgaggagcagctg
cggagggcggcgtatctcaacatgacccaagacccgagtcacccggccatggcactgaac
gcacggctggcagaagtggagtgccttgccgagagccaccagcacctctccaaagagtcc
ctggctgggaacaagcctgccaacgctgtcctgcacaaggtgctgaaccagctcgaggag
ctgctgagtgacatgaaggctgatgtgacacgcttgccctccatgctgtcccgcatcccg
cccgtggccgcccggctgcagatgtcggagcggagcatcctcagccgcctggccacccgt
ggaggggatccagctgcccagggctcctttggctcagcccagatcttcaacaacaacttt
gggccaaatttccgtggtcctgggccgggtgggattgtcaactacagccagatgcctctg
ggaccctatgtgactgatatttag
DBGET
integrated database retrieval system
