KEGG   Cyanistes caeruleus (blue tit): 111938970
Entry
111938970         CDS       T05602                                 
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03082  ATP-dependent chromatin remodeling
ccae03083  Polycomb repressive complex
ccae04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111938970 (RBBP4)
   03083 Polycomb repressive complex
    111938970 (RBBP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    111938970 (RBBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccae03036]
    111938970 (RBBP4)
Chromosome and associated proteins [BR:ccae03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     111938970 (RBBP4)
  Histone modification proteins
   HAT complexes
    HATB complex
     111938970 (RBBP4)
   HDAC complexes
    Sin3A-HDAC complex
     111938970 (RBBP4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     111938970 (RBBP4)
    PRC2.2
     111938970 (RBBP4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     111938970 (RBBP4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111938970 (RBBP4)
  Chromatin remodeling factors
   NuRD complex
    111938970 (RBBP4)
   NuRF complex
    111938970 (RBBP4)
   NuRF complex (fruit fly)
    111938970 (RBBP4)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz CAF1C_H4-bd Beta-prop_CAF1B_HIR1 WD40_Prp19 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR75_1st WD_LRWD1 EIF3I Beta-prop_EML eIF2A
Other DBs
NCBI-GeneID: 111938970
NCBI-ProteinID: XP_023796711
LinkDB
Position
23
AA seq 389 aa
MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDA
SHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYT
KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGK
VVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAE
VNCLSFNPYSEFILATGSADKVLLPEFWNVLAHFLGKSLSFNLTDLVQWSPHNETILASS
GTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSED
NIMQVWQMAENIYNDEDPEGSVDPEGQGS
NT seq 1170 nt   +upstreamnt  +downstreamnt
atgactcatgctctggagtggcccagcctgactgctcagtggcttcctgatgtcacaaga
cctgaaggcaaagatttcagcatccacaggttggtgctgggcacccacacctcagatgaa
caaaaccacctggtgatcgccagtgtgcagctgcccaacgacgatgcccagtttgatgct
tcccactatgacagtgagaaaggagagtttggaggctttggctcagtaagtggaaaaatt
gaaattgaaatcaagataaaccacgagggagaggtgaacagagcccgttacatgccccag
aacccctgcatcatcgccaccaagactccctctagcgatgtcctggtctttgattacacc
aaacacccctccaaaccagacccttctggggagtgcaaccccgacctgcgtctccgtggg
caccagaaggagggatatggactgtcctggaacccaaacctcagcgggcatttgctgagt
gcttctgatgatcatacaatttgcttgtgggatatcagtgctgttcccaaagaaggtaaa
gtggtggatgccaagaccatcttcacaggacacacagcggtggtggaagatgtatcctgg
cacctgctccatgaatccctgtttggatctgttgctgatgatcaaaagctcatgatctgg
gatacccggtcaaacaacacctccaaacccagtcattccgtggatgctcacacagctgag
gtgaactgcctctccttcaacccctacagtgagtttatcctggccacaggatcagctgat
aaggtacttctgcctgaattttggaatgttcttgctcactttctggggaagtctttatct
tttaacctcacagacttagttcagtggtctccccataatgaaaccatcctggcctccagt
ggcacagaccgcaggctaaatgtttgggacttgagtaaaattggagaggagcaatcccct
gaagatgctgaggatggtcccccagagctgttgtttatccatggtggtcatactgcaaag
atctcagatttctcctggaatcccaatgagccctgggtcatttgttctgtatcagaagat
aatatcatgcaagtctggcaaatggcagagaacatctacaacgatgaagatcccgaagga
agcgtggatccagaaggtcaaggatcctag

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