Cyanistes caeruleus (blue tit): 111939085
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Entry
111939085 CDS
T05602
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111939085 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccae03000
]
111939085 (ARID1A)
03021 Transcription machinery [BR:
ccae03021
]
111939085 (ARID1A)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111939085 (ARID1A)
Transcription factors [BR:
ccae03000
]
Eukaryotic type
Helix-turn-helix
ARID
111939085 (ARID1A)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111939085 (ARID1A)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
111939085 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
111939085
NCBI-ProteinID:
XP_023796896
LinkDB
All DBs
Position
23
AA seq
1688 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQTGPQQGHGYPGQPYGPQATQRYPMAMQSRTQSTMG
SISYAQQMPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYPQQPPAQPSHSQPSYQQQ
QQQQQQQQQQQQQAAQPPAPALPSAQPAYSQQPAQQPPSPYPQQPAPQHPQSQPPYPQQQ
SQSPYQQQQAQQPAAPSGLAQASSSYAPAQPPQQPSAYSQQRFPPPQELSQDSFGSQASS
APSMASSKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSN
PAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDT
ILHPSMNQSSIAQDRGYLQRNPQMPQYSSPQPGSALSPRQSSGAQMHAGMGPYQQNSMGS
YGPQGGQYGPQGGYPRQPNYNAMSNASYPSPGMGGSINPLGAGGQLHGQSGVPPYSGLPP
GRMGHAAMGSRPYGPNMGSMPPQVGSGMCPPPAGMNRKAQEAAAAAMHAAANSIQNRPPG
YPNMNQGGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVK
LTPATKMNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKLWVDRYLAFTEEK
AMGMTNLPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKK
QYIQCLYAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSM
AEGGDLKPPTPASTPHSQMPPLPGIRSNSVGLQDAFADSSDPTFQKRNSMTPNPGYQPSM
NTSDMMGRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRTAGPGMGNMAMGQ
RQHYSYGAPYDRVRTEPGMGAEGSLGSGTPQPSILPSTPESGMYSPSRYPQQQQQQQRHD
SYGNQFSTQGTSSGSPFPSQQTTMYQQQQQVSSPAPLPRPLENRTSPSKSPFLHSGMKMQ
KAGPPVPASHIAPAAVQPPMIRRDITFPPGSVEATQPVLKQRRRLTAKDIGTPEAWRVMM
SLKSGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEY
EVGDPGQRTLLDPERFCKSSASSPEEGEEDDEPRSLNCEEEEEDEEEEEAAFSSKDKVPL
ESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTH
FESKTELPLPHKRASCSSALRKRSAAESNPSPREGEAPAPDGSLEKRITATMDDMLSARP
GSLAGEEEEVKASETAKESSKFPFVISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSL
AKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQ
DQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPILDGLLHWAVCPSA
EAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSD
RKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQAGLMH
MQSPPFEATSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICD
VLFLIGQS
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atggaccagatggggaagatgaggcctcagccctacggagggaacaacccctacacgcag
cagcaggggccgcagacagggccgcagcagggccacggctaccccgggcagccctacggg
ccccaggccacgcagagataccccatggcaatgcagagcaggacacagagcaccatgggc
agcatctcctatgcacaacagatgcctccgtacgggcagcagggccccagcgcgtacggg
cagcagagccagacaccctactacaaccagcagagccctcacccgcagcagcagcagcct
ccctaccctcagcagcctccagcacagccctcgcactcccagccctcgtaccagcagcag
cagcagcagcagcagcaacagcagcagcagcagcagcaggcggctcagcccccggccccg
gcgctgccctcggcgcagccggcgtactcgcagcagccggcgcagcagccccccagcccg
tacccgcagcagccggccccgcagcacccccagagccagcccccctaccctcagcagcag
tcccagtcgccgtaccagcagcagcaggcgcagcagcccgcggccccctcggggctggcc
caggcctcctcgtcgtacgcgccggcgcagccgccgcagcagccctcggcctactcccag
cagcgcttccccccgcctcaggagttatctcaagactcgtttgggtcccaggcatcctct
gctccctcaatggcttccagtaaagggcaagaagacatgaacttgaatcttcagtccaga
ccttccagcctgccggacctgtctggttccatagatgacctgcccatggggaccgaagga
gccctgagccctggagtaagcacatcagggatttccagcagccaaggagagcagagtaac
ccagctcagtctcctttctcgccacatacctctcctcacctgccaggcatcagaggaccc
tccccgtccccagttggatctccagccagcgttgctcagtcccgctccggccccctctcc
cctgctgcagtcccaggcaatcagatgcctccccgcccgcccagtggccagtcggacacg
atcctgcacccctccatgaaccagtcgagcatcgcgcaggaccgagggtacctgcagagg
aacccgcagatgccccagtacagctccccccagcccggctcagccttatccccccggcag
tcctcgggagcacagatgcacgccggcatggggccctaccagcagaactccatggggagc
tacggaccccagggcgggcagtacggacctcaaggaggttaccccaggcagcccaactac
aacgccatgtccaacgccagctaccccagcccgggcatggggggcagcatcaacccgctg
ggcgcgggcgggcagctgcatgggcagagcggggtgcccccgtacagcgggctgcccccg
ggcaggatgggccacgcagccatgggcagccggccctacggccccaacatgggcagcatg
cccccccaggtgggcagcggcatgtgccccccgcccgccggcatgaaccgcaaggcgcag
gaggccgccgccgccgccatgcacgccgccgccaactccatccagaacaggcctcctggt
tatcccaacatgaatcaggggggaatgatgggcactggacctccttacgggcaggggatt
aacagcatggctggcatgataaacccccagggcccaccctaccccatggggggaaacatg
gccaacaactctgcagggatggcagcaagccctgaaatgatgggactcggggatgtcaaa
ttaacacctgcaactaaaatgaacaacaaggcagatgggacgcccaaagcagaatccaag
tcaaagaagtccagttcctctaccacaaccaacgagaagatcaccaaactgtatgagctg
ggcggggagcccgagaggaagctgtgggtggatcgttacctggccttcaccgaggagaag
gccatgggcatgaccaacctgccagccgtgggcaggaagcccctggacctgtacaggctc
tacatctccgtcaaggagatcgggggattgactcaggtcaacaaaaacaagaagtggcgt
gagctggccaccaacctgaacgtgggcacgtcgagcagcgcggccagctcgctgaagaag
cagtacatccagtgtctgtacgccttcgagtgcaagatcgagaggggcgaggacccccct
ccagacatctttgcagctgctgattcaaagaagtcccagaccaagatccaacctccatct
ccagcggggtcaggctccatgcagggcccccagacacctcagtccaccagcagctccatg
gcagaaggaggagacctgaagccaccaactccagcatcgacgccacacagtcagatgccc
cctttgccaggcatcaggagtaactccgtgggccttcaggacgcctttgcggacagcagt
gatcccacgttccagaaacggaactccatgactccaaatccagggtaccagcccagcatg
aatacctctgacatgatgggtcgcatgtcttacgagccaaataaagatccttacagcagt
atgaggaaagctccaggaagcgatcccttcatgtcctcagggcagggccccaacagtggc
atgggtgacccttacaaccgcaccgccggccccggcatgggcaacatggccatgggccag
cggcagcactactcctacggagcgccctacgaccgagtcaggacggagcccgggatggga
gccgagggcagcctgggcagcgggaccccccagcccagcatcctgccctccacgcccgag
tcgggcatgtactcgcccagccgctacccccagcagcagcagcagcagcaaagacatgat
tcctatggcaatcaattctccactcaaggcacatcctcgggcagccccttccccagccag
caaaccaccatgtatcagcagcagcagcaggtatccagcccagcacctctgcccagacct
ctggagaaccgcacttctcccagcaaatccccgttcctgcactcggggatgaagatgcag
aaggcggggccgcccgtgcctgcctcgcacatcgcaccagcagctgtccagcctcccatg
atccgacgggacatcaccttcccgccgggctccgtggaagccacgcaacctgtgctcaag
cagaggaggcggctgacggcaaaagatatcggaactcctgaagcctggagagtgatgatg
tctctgaagtcggggctgctggctgaaagtacgtgggccttagataccataaacatcctg
ctttatgatgacaacagcataatgaccttcaacctcagccagctgccaggcttgctggaa
ctcttggtggaatatttccggcgctgcctgatcgaaatctttggaatcctgaaggaatac
gaggtaggagacccagggcaaagaacactattagatcccgaaaggttctgcaaatcttca
gcttcctcccctgaagaaggggaggaggacgatgagccacggagcctgaactgtgaggag
gaagaggaggatgaggaagaggaggaggctgcgttttcgagcaaggacaaagtacctcta
gagagcagcgaggagaagctagtgagtaaattcgacaagcttccagtgaaggtggtgcag
aagaacgaccccttcgtggtggattactcggacaagctgggccgggtgcaggagttcgac
agcgggctcctgcactggcgcatcggcggcggggacaccaccgagcacatccagacacac
ttcgagagcaagaccgagctgcccttgcctcacaaacgagcttcctgctcctctgccttg
aggaaacgttcagcagccgagagcaacccgagccccagggaaggggaggctcctgcgccc
gacggctccttggagaagaggataactgccaccatggacgacatgctctcggcgcgccca
ggatccctggcaggggaggaggaagaggtcaaagcttcggaaacggcgaaggagagcagc
aagtttccctttgtcatcagtccagctcagagccacagaaatatcaaaatcctggaggat
gagccccacagtaaggacgagacgccgctctgcaccctcctggactggcaggactctctg
gccaagcgctgcatctgcgtctccaacatcatcaggagtttatcgttcgtgccgggcaat
gactttgaaatgtccaaacaccccgggctgctgctgattctagggaaactgattctccta
caccacaagcacccagaacgcaaacaggcccccctgacctacgagaaagaggaggagcag
gaccaaggggtgagctgcaacaaggtggagtggtggtgggactgtttggagatgctgcgt
gaaaacacactggtcacgttggccaacatttctgggcagctggacctctccccttaccca
gaaagcatctgtttgcctatcctggatggactcctccactgggcagtgtgtccctcggca
gaggcccaggatccttttccgacactgggacccaacgctgtcctctccccccagagactg
gttttggaaacactcagcaaactcagcatccaggacaacaacgtggatttgatcctcgcc
acgcccccgttcagccgcctggagaagctgtacagcaccatggtgaggttcctcagtgac
agaaagaacccggtgtgccgggagatggccgtggtgctgctggccaacctggcccagggg
gacagcctggccgccagagccattgccgtgcagaagggcagcattggcaacctgctgggc
ttcctggaggacagcctggccgccacgcagttccagcagagccaggcagggctgatgcac
atgcagagcccgccctttgaggccaccagcgtggacatgatgcgccgcgctgcccgtgcg
ctgctggccctggccaaggtggacgagaaccactcggagttcaccttgtacgagtcgcgg
ctcttggacatctccgtgtcgcctttgatgaactctttggtttcacaagttatttgtgat
gtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
