Cyanistes caeruleus (blue tit): 111939106
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Entry
111939106 CDS
T05602
Symbol
SRRM1
Name
(RefSeq) serine/arginine repetitive matrix protein 1 isoform X1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111939106 (SRRM1)
03015 mRNA surveillance pathway
111939106 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111939106 (SRRM1)
03041 Spliceosome [BR:
ccae03041
]
111939106 (SRRM1)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111939106 (SRRM1)
Spliceosome [BR:
ccae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
111939106 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
111939106
NCBI-ProteinID:
XP_023796935
LinkDB
All DBs
Position
23
AA seq
861 aa
AA seq
DB search
MSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAR
EFMGELWPLLLSAQENIAGIPTAFLELKKEEIKQRQIEQEKLASMKKQDEDKEKRDKEDK
DNREKRDRSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPHHRTKSRSATPAPEKKEAT
PEPEPSVKPKETVVQEATSNSDIPKAPKPEPPVPETKETSPERNSKKEREKEKEKTRQRS
PTRSKSRSRSRSRSPSHSRPRRRHRSRSRRRPSPRRRPSPRRRSPPRRMPPPPRHRRSRS
PVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRPVSSPPRKTRRLSPSASPPRRRHRPS
PPGSPPGKPRRSPTPQQSNRARKSRGSVSPSRASAPKHKSTEKRESPSPAPKPRKAELSE
SEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEEERPKRSNVKNGEVGRRRRHS
HSRSPSPSPRKRQKESSPRMQMEKRWQSPVMKSSRRRRSPSPPPARRRRSPSPAPPPRRR
RSPSPPRRRSPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPQS
KRRVSHSPPPKQRSSPTAKRRSPSVSSKHRKGSPPSRSNRETRSPPQNKRHSPSPRPRAS
HPSSSPPPPRRGASASPQRRQSPSPSTRPIRRVSRTPEPKKTKASTPSPRRVSSSRSASG
SPETAPKKHQGPASPARSRSPSANWSPAKKAKSPTQSPSPARNSDQEGGGKKKKKKKDKK
HKKDKKHKKHKKHKKEKAAVAAAAATVAAPDTTSVQEDQEAETEPKKETESEPEDNLDDL
EKHLREKALRSMRKAQVSPPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaaatctggaagtaatcaaaccatggataacaaaacgagtaacagaaatc
cttggatttgaagatgatgtagtaattgaatttatattcaaccagttggaagtgaagaac
ccagattccaaaatgatgcaaatcaacctgactggttttttgaatgggaaaaatgctagg
gagttcatgggagaactgtggccactgctattaagtgcacaagaaaacattgctggtatt
ccaactgcatttctggaactgaagaaagaagaaataaaacagcgacagatagagcaggag
aaactggcttccatgaagaaacaagatgaagacaaagagaagagagataaggaggacaaa
gacaacagagagaaaagagacagatccaggagtccaagaagacgcaagtcccgctctccc
tccccgcggcggaggtcgtcgcccgtgcgccgcgagcgcaagcgcagccactcccgctcg
ccccaccaccgcaccaagagccgcagtgccacccctgcccccgagaagaaagaggccact
cccgagcctgagccctccgtgaaaccaaaggagactgttgtgcaagaggcaacttcaaac
agtgatatcccgaaagctcctaaacctgaacctcctgtaccagagactaaggaaacttca
ccagaacgtaattcaaagaaggagagagaaaaggagaaggagaagactcgtcagagatcc
ccaactcggtccaagtccaggtcaagatcccgatcccgttctccatctcattctcgaccc
agaaggcgccatagatcacggtcaagaaggcgacccagcccgcggcgccggccgtcccca
cgcaggaggagcccaccccggagaatgcctcccccacccaggcacaggaggagcagatcc
cccgtgaggcggagaagacgctcctcggcctcgctgtccggcagcagctcctcctcgtcg
tcatcgcgctcccgctctccaccaaagaagcctcccaagagacccgtgtccagccctccc
cgcaaaacgcgccggctgtcgccctcggccagtcccccccggcgccgccaccggccctcg
ccccccggcagcccccctggcaaaccgcgccgctcgcccacgccgcagcagtccaaccgc
gcccgcaagagccgcggctccgtctcacccagcagggcttcagcacccaaacataagagt
accgagaaaagagaatctccttcgccagcacccaagcccaggaaagcagaattgtcggaa
tcagaagaagacaaaggaggcaaaatggctgcagcagattctgtccaacagaggcgccag
tacaggaggcaaaatcaacagtcttcatctgattctggttcttcatcttcctcagaggag
gagaggcccaagaggtcgaacgtgaagaacggggaggtgggcaggcgccgccggcactcg
cactcgcgcagcccctcgccttcgccccgcaagcgccagaaggaatcctcccctcggatg
cagatggaaaagaggtggcaatcaccagtgatgaaaagcagcaggaggaggaggagcccc
tcgccgccccccgcgcgccggcgccgctccccttccccggccccgccgccccggcgtcgc
cgctcgccgtccccgcctcgccgaaggtctccatcaccacccccacgcagacgttctccc
tctccacggagatactcccccccgatccagaggcgatattccccatctccccctcccaag
aggagaacagcttctcctcctccccctcccaaaagaagggcctccccttccccccagtcc
aagcgcagagtctcccactccccaccgccaaaacagaggagctcccctactgctaaacgg
cgctccccttccgtatcttccaagcacaggaaggggtctcctcccagcagatccaacagg
gaaacacgttctccaccacaaaacaaaaggcattcaccttcaccacggcctcgagcttcc
cacccctcctccagccctccgccgccgcgccggggagcgtcggcgtcgccgcagaggagg
cagtcaccctcacccagcaccaggcccatcaggagggtgtccagaacaccagaacccaag
aaaacaaaggcttccacccccagcccccggcgcgtgtcctcgtcccgatctgcgtcaggg
tcacctgagacagctcccaaaaagcaccaaggacctgcatctcctgcccggtctcgctct
ccttctgcaaactggtcacctgcaaaaaaggccaagagcccaactcagagcccatcacct
gccaggaattcagatcaagaaggtggtggcaagaagaagaagaaaaagaaggataagaag
cataaaaaggataaaaagcacaagaaacacaaaaagcataagaaggagaaggcagcagtg
gctgcagcagctgctactgtggctgcaccagacaccacctcagtacaggaagaccaggaa
gcagagacagaacccaaaaaggagacagagagtgaacccgaggacaacctggatgaccta
gaaaagcacctgcgggagaaggccctgaggtccatgaggaaggcgcaggtgtcccccccc
tcctag
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integrated database retrieval system
