Cyanistes caeruleus (blue tit): 111939158
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Entry
111939158 CDS
T05602
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
ccae03083
Polycomb repressive complex
ccae04110
Cell cycle
ccae04330
Notch signaling pathway
ccae04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111939158 (HDAC1)
03083 Polycomb repressive complex
111939158 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
111939158 (HDAC1)
04350 TGF-beta signaling pathway
111939158 (HDAC1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111939158 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111939158 (HDAC1)
Enzymes [BR:
ccae01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111939158 (HDAC1)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
111939158 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
111939158 (HDAC1)
BRAF-HDAC complex
111939158 (HDAC1)
REST complex
111939158 (HDAC1)
SHIP complex
111939158 (HDAC1)
MiDAC complex
111939158 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
111939158 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
111939158 (HDAC1)
Chromatin remodeling factors
NuRD complex
111939158 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
111939158
NCBI-ProteinID:
XP_023797022
LinkDB
All DBs
Position
23
AA seq
482 aa
AA seq
DB search
MVPLQELMINSFLLPGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANA
EEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASA
VKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIF
KPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGG
GYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEK
IKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEDDPEKRISIRNSNKRISCDEEFS
DSEDEGEGGRKNVANFKKAKRVKAEEEKEEEEKKDEKEEEKVKEEKAAAAEPKGVKEETK
ST
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggtccctctccaggaattgatgatcaactcctttctgcttccaggggatgttgggaat
tattattatggccaaggacatcccatgaaaccccacaggatccgcatgacccacaacctc
ctgctcaactatgggctctacaggaagatggaaatctatcgtcctcacaaagccaatgca
gaggagatgaccaagtaccacagcgacgattacatcaaattcctgaggtccatccgccct
gacaacatgtctgagtacagcaagcagatgcaaagatttaatgttggggaggactgccct
gtgttcgatgggctctttgagttctgtcagctctctgctggaggctctgttgccagtgct
gtgaagctgaacaagcagcagacagacatcgcagtgaactgggcaggaggtctccaccac
gccaaaaaatcagaagcttctggtttctgctacgtcaacgacatcgtcctggccatcctg
gagctcctcaagtaccaccagcgggtgctgtacattgacatcgacatccaccacggggat
ggagtggaggaggctttttacaccacagaccgagtcatgaccgtgtccttccacaaatat
ggagaatatttcccaggaactggggacttgagggacattggggcaggcaaagggaagtac
tacgctgtcaattatccgctgcgggacggcatcgacgacgagtcctacgaagccattttc
aagcctgtgatctccaaagtgatggagacgttccagcccagcgccgttgtcctgcagtgc
ggctccgattccctgtctggggacaggctgggctgcttcaacctgaccatcaaaggccat
gccaagtgcgtggagtttgtgaagagctttaacctgcccatgctgatgctgggaggaggg
gggtacacgatccgcaacgtggcccgctgctggacctacgagactgctgtggctttggac
actgagatccccaatgaacttccatacaacgactactttgagtactttgggccagacttc
aagctccacatcagcccctccaacatgaccaaccagaacaccaacgaatacctggagaaa
atcaagcagcggctcttcgagaacctgaggatgctccctcatgctcccggggtccagatg
cagccaattcctgaggatgctgtccaggaggacagtggggatgaggaggaggatgatcct
gagaaacgcatttccatccgaaattccaacaagagaatatcctgcgatgaggaattctcc
gactccgaggacgagggcgagggaggccgcaaaaacgtcgccaacttcaagaaagccaaa
cgtgtgaaagcagaggaggagaaggaggaagaggagaagaaagatgagaaagaagaggaa
aaagtaaaagaggaaaaagcagcagcagcagaacccaaaggggtgaaggaagaaacaaaa
tccacttga
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