KEGG   Cyanistes caeruleus (blue tit): 111939158
Entry
111939158         CDS       T05602                                 
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae03082  ATP-dependent chromatin remodeling
ccae03083  Polycomb repressive complex
ccae04110  Cell cycle
ccae04330  Notch signaling pathway
ccae04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111939158 (HDAC1)
   03083 Polycomb repressive complex
    111939158 (HDAC1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    111939158 (HDAC1)
   04350 TGF-beta signaling pathway
    111939158 (HDAC1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    111939158 (HDAC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccae03036]
    111939158 (HDAC1)
Enzymes [BR:ccae01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     111939158 (HDAC1)
Chromosome and associated proteins [BR:ccae03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     111939158 (HDAC1)
   HDAC complexes
    Sin3A-HDAC complex
     111939158 (HDAC1)
    BRAF-HDAC complex
     111939158 (HDAC1)
    REST complex
     111939158 (HDAC1)
    SHIP complex
     111939158 (HDAC1)
    MiDAC complex
     111939158 (HDAC1)
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     111939158 (HDAC1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    111939158 (HDAC1)
  Chromatin remodeling factors
   NuRD complex
    111939158 (HDAC1)
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 111939158
NCBI-ProteinID: XP_023797022
LinkDB
Position
23
AA seq 482 aa
MVPLQELMINSFLLPGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANA
EEMTKYHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASA
VKLNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGD
GVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIF
KPVISKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGG
GYTIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEK
IKQRLFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEDDPEKRISIRNSNKRISCDEEFS
DSEDEGEGGRKNVANFKKAKRVKAEEEKEEEEKKDEKEEEKVKEEKAAAAEPKGVKEETK
ST
NT seq 1449 nt   +upstreamnt  +downstreamnt
atggtccctctccaggaattgatgatcaactcctttctgcttccaggggatgttgggaat
tattattatggccaaggacatcccatgaaaccccacaggatccgcatgacccacaacctc
ctgctcaactatgggctctacaggaagatggaaatctatcgtcctcacaaagccaatgca
gaggagatgaccaagtaccacagcgacgattacatcaaattcctgaggtccatccgccct
gacaacatgtctgagtacagcaagcagatgcaaagatttaatgttggggaggactgccct
gtgttcgatgggctctttgagttctgtcagctctctgctggaggctctgttgccagtgct
gtgaagctgaacaagcagcagacagacatcgcagtgaactgggcaggaggtctccaccac
gccaaaaaatcagaagcttctggtttctgctacgtcaacgacatcgtcctggccatcctg
gagctcctcaagtaccaccagcgggtgctgtacattgacatcgacatccaccacggggat
ggagtggaggaggctttttacaccacagaccgagtcatgaccgtgtccttccacaaatat
ggagaatatttcccaggaactggggacttgagggacattggggcaggcaaagggaagtac
tacgctgtcaattatccgctgcgggacggcatcgacgacgagtcctacgaagccattttc
aagcctgtgatctccaaagtgatggagacgttccagcccagcgccgttgtcctgcagtgc
ggctccgattccctgtctggggacaggctgggctgcttcaacctgaccatcaaaggccat
gccaagtgcgtggagtttgtgaagagctttaacctgcccatgctgatgctgggaggaggg
gggtacacgatccgcaacgtggcccgctgctggacctacgagactgctgtggctttggac
actgagatccccaatgaacttccatacaacgactactttgagtactttgggccagacttc
aagctccacatcagcccctccaacatgaccaaccagaacaccaacgaatacctggagaaa
atcaagcagcggctcttcgagaacctgaggatgctccctcatgctcccggggtccagatg
cagccaattcctgaggatgctgtccaggaggacagtggggatgaggaggaggatgatcct
gagaaacgcatttccatccgaaattccaacaagagaatatcctgcgatgaggaattctcc
gactccgaggacgagggcgagggaggccgcaaaaacgtcgccaacttcaagaaagccaaa
cgtgtgaaagcagaggaggagaaggaggaagaggagaagaaagatgagaaagaagaggaa
aaagtaaaagaggaaaaagcagcagcagcagaacccaaaggggtgaaggaagaaacaaaa
tccacttga

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