Cyanistes caeruleus (blue tit): 111939314
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Entry
111939314 CDS
T05602
Symbol
ARHGEF12
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04270
Vascular smooth muscle contraction
ccae04625
C-type lectin receptor signaling pathway
ccae04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
111939314 (ARHGEF12)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111939314 (ARHGEF12)
09153 Circulatory system
04270 Vascular smooth muscle contraction
111939314 (ARHGEF12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccae04131
]
111939314 (ARHGEF12)
Membrane trafficking [BR:
ccae04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
111939314 (ARHGEF12)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
AAA_23
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
111939314
NCBI-ProteinID:
XP_023797228
LinkDB
All DBs
Position
24
AA seq
1533 aa
AA seq
DB search
MSGTQSTITDRFPLKKPSRHGSILSRESPADKKQKVERCSSTHDFDPTDSSSKKTKSSSE
ESRSETYGLVQRCVVIQRDENGFGLTVSGDNPVFVQSVKEDGAAMRAGVQTGDRIIKVNG
TLVTHSNHLEVVKLIKSGSYVALTVQGRPPGSPQIPLADSDVDLAAFGHMSPIMASPHSP
GTSGNAERITSPVLMGEENNIVHSQKVEILRKMLQKEQERLQFLQEEYSRAPSTRLLKEI
QETKKHIPQLQEQLSKATGCTQDGVLSSRAVSEALQISEGEAESGDSGSKLDFSGDSPSR
PNSDIADSPRSGLKERIYPDESPEKAELQDTDSQSSVGSPLSRVGTQIIGAEDDDFDTEQ
EQINGQCSCFQNIELLKSRPAHLAVLLHHVVSQFDPAALLCYLYTDLYKQTNSKETRRVF
LEFYQFFLDRAANLKVPVPDEISLELDRRRPELLPEELHRQFIQTMQDKVCPEVQRNLED
FRQKRSMGLTLAEGELTRLDAERLRDRNAVEKERSCAEQIIAKIEEVLMTSQPLEEDKSS
TMQYVILTYMKHLGVKVKEPRNLEQKRGRIGFLPKIKQSIKKEKEGEEKGKRRGFPNILG
PPRRPSRHDSSAIGRAMEMQKPRHPKHSPTASSVSPEPPESSKLRQSGSSSDGTDAPYPP
ANPMSPLATGPFASPEGSKDGDTGLKQPGEAPPASDSMDGTPRTPNNTFEFPSPLENLQE
EEGESERMVDMGTPKPFRKMDSVGFADVQSEDELYDFDMDMDPPNWQQLVSREVLMGLKP
YEIKRQEVINELFYTERAHVRTLKVLHNVFYQRVTREGILSSSDKRKIFSNLEDILGLHV
ALNDQMKSVRKRNETSVIGQIGEDLLSWFSGAAEEKLKLATATFCSNQPFALEVIKSRQK
KDSRFQTFVQDAESNPLCRRLQLKDIIPTEMQRLTKYPLLLDNIAKYTELPEEKEKVKKA
ADHCRQILNHVNQAVKESENKQHLEDYQRRLDLSYLKQSEDPMMDEFRNLDLTKRKMLHE
GPLTWKVNRDKTIDLYTLLLEDILVLLQKQDDKLVLKCHSKILASTADSKHTFSPIIKLN
TVLVRQVATDNKAFFVISMSATGAHIYELVAQTVSEKNVWQDLIAQMAGTVKMGSSRRVI
PLPQSGPGEDEREEEEQQKLKEQHDIPASSLQSPDKDLGLESPLILNPQSSSPIMSDKAK
VEGLLGAEGQFEKVQQAELALKDSSACYEHTASSSAPEGQWARDALRNLGLLRQLLVQQL
GLAEKGSLEDRQRLPRFRTVSQEGQTESGSELQPSDSKFQQPGEDGSAGRTREPAAGPGP
RTAAEGPAPGDGLQLAEPAARGALPMDSTNLEGSSSELEGLGAEESGEHFFDAREAHSDE
NPAESELLDRKEDEEVQIRISGNYLILDGYGTVQESSTDEEVSALVLQCTSHSQPPLDCP
QQQPLSPRDTQSDGGSSPFPEELLGSRWAGLEEPCPFLGSPQLPLEIRVQLMQYIQNIED
ALEKLKEVEEDYSVLRRQGLAGSASTGEHSDKS
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcacacagtccacaatcacggacaggtttcctctcaaaaaaccttcgagacac
ggcagcattctgagcagagagtctccagcagacaagaagcagaaggttgagcgctgcagc
agcacccacgacttcgatcccacagatagctcctccaagaagacaaagtctagttctgag
gagagtagatccgagacgtatggcctggtgcagaggtgtgtggtgatccagcgggatgag
aacggcttcgggctgacggtcagcggggacaaccccgtcttcgtgcagtccgtcaaggaa
gatggagcagccatgcgggctggagtgcagacaggtgatagaattatcaaggtgaacggg
actctggtgacacactcgaaccatttggaggtggtcaagctgatcaagtcgggttcctat
gtagctctcactgtccaggggcgccctccagggtcaccccagattcccttggcggattcc
gacgtggatctggcagcttttgggcatatgtctcccatcatggcatccccccactcgcct
ggcacgtcagggaatgcagagaggatcaccagcccagtgctcatgggggaggagaataac
attgtccacagccagaaggtggagatcctgaggaagatgctccagaaggagcaggagagg
ctgcagttcctgcaggaggagtacagcagagccccctccacccgcctgctcaaggagatc
caggagacgaagaaacacattcctcagctgcaggagcagctgtccaaggccacaggctgc
actcaggatggagtcctgtcctcccgggcggtgtccgaggcgctgcagatcagcgagggg
gaggcagagagtggggacagtggcagcaaactggatttcagtggtgacagcccctccaga
cccaacagtgacattgctgatagtcctcgcagcggcctgaaggagaggatttatccagat
gagagcccagaaaaggctgagcttcaagatactgattcccagtccagcgttggaagtccc
ctgtcccgagtggggactcagatcattggagcagaggatgatgattttgacacggagcag
gagcagattaatgggcagtgcagctgcttccagaacatcgagctcctgaaatcccgcccg
gctcacctggctgtgctcctgcaccacgtggtgtcccagtttgatcctgcagccctgctg
tgctacctttacacagacctgtacaaacagaccaactccaaagagacccggcgcgttttc
ctggagttttaccagtttttcctggacagagctgcaaacctgaaagtcccagttccagat
gaaatctccttggaattagacaggagaaggccagagctcctccctgaagagctccaccgc
cagttcatccaaaccatgcaggataaagtctgtccagaggttcagaggaacctggaagat
ttcaggcagaagcggagcatggggctgaccctggccgagggggagctgaccaggctggac
gcagagcggctgcgcgaccgcaacgccgtggagaaggagaggagctgtgccgagcagatc
atcgctaaaatcgaggaggtcctgatgacatctcagcctctggaagaagacaagagctcc
accatgcaatatgtgatcctcacctacatgaaacacctgggagtcaaagtcaaagagcct
cggaacctggagcagaagcggggccggattggtttcctgccaaagatcaagcaaagcatc
aagaaggagaaagaaggagaggagaaagggaagaggagaggcttccccaacattctgggc
cccccgaggaggccgagccgacatgacagcagtgcaattggcagggccatggagatgcag
aagcccaggcaccccaagcactcccccacagcctcttccgtgagcccagagccccctgag
tccagcaagctgcggcagagcggctcctccagcgatggcacagatgccccttacccccct
gccaaccccatgtcccccctggcaacggggccctttgcctccccagagggcagcaaggac
ggtgacacaggtttgaagcagcctggggaagccccacctgccagtgactccatggatggc
accccccgcacgcccaacaacacctttgagttcccatctcctttggaaaacctgcaggag
gaggagggagaatctgagaggatggttgacatgggaacaccaaaaccttttcgcaagatg
gacagtgttggctttgcagatgtgcagagtgaggatgagctctatgacttcgacatggac
atggaccctcccaactggcagcagcttgtgagcagggaggtgctgatggggctcaaaccc
tacgaaatcaagcgtcaagaagtgataaatgagctgttctacacggagcgagcccacgtg
cgcacgctgaaggtcctgcacaacgtcttctaccagagggtcaccagggagggcatcctc
agctccagtgacaagcggaaaatcttctccaaccttgaggatatccttgggctgcatgtt
gcactgaacgatcagatgaaatctgtccgaaaaaggaacgagacttctgtcattggccaa
attggggaagatttgctctcctggtttagtggagcagcagaggagaagctgaaacttgcc
actgccaccttctgcagcaaccagcccttcgctcttgaggtcatcaagtcccgccagaag
aaggactcgcgcttccagaccttcgtgcaggatgctgagagcaaccccctgtgccggcgg
ctgcagctgaaggatatcatccccacggagatgcagaggttgactaaatacccccttctg
ctggataacattgctaaatacacagagctgcctgaggagaaggagaaggtgaagaaagcg
gcagatcactgtcgccagatcctcaaccacgtgaaccaggctgtcaaagagtcagagaac
aagcagcatctggaggattatcagcggcgactcgacctctcctacttgaagcagtcggag
gatcccatgatggatgagttcaggaacctggatctaacaaagaggaaaatgctccatgaa
gggcccctgacctggaaagtgaatcgtgacaaaaccatcgatctgtacactctgctgctg
gaggacatcctggtgctgctgcagaaacaagatgacaaactggtgctgaagtgccacagc
aagatcctggcatccacagccgacagcaaacacaccttcagccccatcatcaaactcaac
actgtgctggttcgccaggtggccacagataacaaagctttcttcgtcatctccatgtcg
gcgacgggggctcacatctacgagctggtggcacagactgtctccgagaagaatgtctgg
caggaccttatagctcagatggcaggaactgtgaagatggggagcagcagaagagtgatc
ccactgcctcagtcaggccctggagaagatgagcgtgaagaagaggagcagcagaagctc
aaagagcagcatgacattcctgccagcagcctgcaaagtccagataaagatttgggcctg
gagtctcccttaatactgaaccctcagtcctcttcacccatcatgtctgacaaggccaag
gtggaagggctgctgggggctgagggacagtttgagaaggtgcagcaggcagagctggca
ctgaaggactcctctgcctgctatgaacacacggccagcagctcagccccagagggacag
tgggcacgggatgccctgaggaacttggggctgctgaggcagctcttggtgcagcagctc
ggcctggctgagaaggggagcctggaggacagacagcgcttgcccaggttcaggaccgtg
tcccaggaaggccagacagagagtgggagcgagctgcagccctctgacagcaaattccag
cagcctggagaggacggaagcgctggcagaactcgagagcccgcggctgggcccggcccc
cggactgcagcggagggcccggccccgggggacggcctgcagctggcagagcccgcggcc
aggggcgctttgcccatggacagcacgaacctggagggctccagctcggagctggagggg
ctgggggctgaggagagcggggagcatttcttcgatgcccgggaagctcacagcgacgag
aacccggccgagagcgagctgctggacaggaaggaggacgaggaggtgcaaattcggatc
tcaggaaattatctgatcctcgacggatacggaacagtgcaggagagctccacggacgag
gaggtgtcagccctggtcctgcagtgcacctcccacagccagccccccctggactgtccc
cagcagcagcccctgtccccaagggacacccagtcagacgggggcagctccccgttcccc
gaggagctgctgggctcgcgctgggcagggctggaggagccctgccccttcctgggcagc
cctcagctcccgctggagatccgagtgcagctcatgcagtacatccagaacatcgaggat
gccctggagaagctaaaggaggttgaggaggattacagcgttctgcggcgccaggggctg
gctggctcagcctccacaggagagcactcagacaaaagctag
DBGET
integrated database retrieval system
