Cyanistes caeruleus (blue tit): 111939396
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Entry
111939396 CDS
T05602
Symbol
NFRKB
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111939396 (NFRKB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccae03036
]
111939396 (NFRKB)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
111939396 (NFRKB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NFRKB_winged
Motif
Other DBs
NCBI-GeneID:
111939396
NCBI-ProteinID:
XP_023797364
LinkDB
All DBs
Position
24
AA seq
1299 aa
AA seq
DB search
MDSLDHMLTDPLELEGSCARIMEDCMLGTTRVSLPEDLLEDPEIFFEVVSLSTWQEVLTD
EQQDHLKKFLPHFPENNREHQNKLISALFSGENFRFGNPLHIAQKLFRDGHFNPEVVKYR
QLCYKSQYKRYLSAQQQYFYRLLKQILASRNHLLELARKGGPDMTLRRKHFPPTYDSEER
DRRTHRRYLKILREVKEECGDTALSSDEEDLISWPPSSPARCSSPPVPLRVIPTLSTLDM
KTADKIELGESDLKMMLKKHHEKRKRQPDHPDLVTTDLTLEDIMTRVNAGRKGSLATLFD
LVTLKKKVKDKEDKKKKKPKIIKSEVEDLADSLGNADGLTSVSQNFSPLPLSSIKEEPLE
DMKPCLEINEISSSFFFLLLEILFVEGPATLSVLEDKVLDWQSSHASALNNWFSFAPNWS
ELVLPALQYLAGDSRDAPSSFSPFVEFKEKTQQWKLLGSYQDHEKELAALFHLWLETKDQ
TFFKENEDSLDAMPLPRVRTDYVVRPSTGEEKRVFQEQERYRYSQPHKAFTFRMHGFESV
VGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEICELLKD
SQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSEEEFERIHHAQ
AAAAKAKKALQKPKPPAKMKSSSKEGAVKALPTSTAEPSHLSLSDSSMPPTPVTPVTPTA
PALPATPISPPPVSAVSKSVSGAGSETAKPSQSVLLVSSPTMPQLGTLLSPAQSSQVQPG
PVPTPRVVSHSSSSGLPQVRVVTAQASLPAVSQQAPVVTQQQQQPTSVPQVRVPATSAQT
KVLPQAVMTLPVKAQSSPVQVPRAGSSMASQAGISVTGLPAVPSPAVKPVTSSPGSSAAS
TSSTTVIQNVAGQNIIKQVAITGQLGMKTQAGSGIPLTATNFRIQGKDVLRLPPSSITTD
AKGQTVLRITPDMMATLAKSQVTTVKLTQDLFTAAAGSSAGGKGISATLHVTSNPVQTAE
SPAKTSTVSSVSSSPAGGTVVKVTPDLKTAEPTSSAFRLMPALGMTVADQKSKAITTVAS
TEAKPAATIRIVQGLGVIPPKAGQTITVATHAKQVPSSSAVNVAGTGHTSLPTVSATVSK
AVAVASGAAGTPITIGTGATAVRQVPVSTTVVSTSQAGKLPARITVPLSVISQPVKGKSV
VTAPIIKGNLGANISGLGRNIILTTMPAGTKLIAGNKPVSFLTAQQLQQLQQQGQATQVR
IQTVPASHLQQGTVSGSTKAVSTVVVTTAPSPKQTQDQL
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggattccctggatcacatgctcacagaccccctggagctggagggcagttgtgcacgg
atcatggaggactgcatgctgggcaccacacgggtcagtctgcccgaggacctcctggag
gatcctgagatcttctttgaggttgtcagcttgtcaacgtggcaggaggtcctgacagat
gagcagcaagaccacctaaaaaaattcctgcctcacttccctgagaacaaccgagagcat
cagaacaagctcatctcagcactgttcagtggggagaactttcgatttgggaacccactg
cacattgcccagaaactcttccgggatgggcacttcaatcctgaggtggtgaagtaccgg
cagctctgttacaagtcgcagtacaagcgctacctgagtgcccagcagcagtacttctac
aggctgctcaagcagatcctcgcttcccgcaatcacttgctggaattagccaggaaagga
ggccctgacatgaccctaaggagaaagcacttcccaccgacatacgactcagaagaacga
gacagacggacacacaggcgatacttgaagatcctgagagaagtgaaagaggagtgtgga
gacactgccttgtcttctgatgaagaagatttaatctcttggcctccaagttctccagca
cgttgttcaagtccaccagttcccctcagagtgatccccacattgtcaaccttggacatg
aaaactgcagacaagatagaacttggggaaagtgatttaaagatgatgttgaagaagcac
catgagaaacgaaaacgtcagcctgatcaccctgacctagtcacgacagacctgaccctt
gaggacatcatgactcgagtgaatgccggaaggaaaggttccttagcaaccttatttgac
cttgtgaccctcaagaaaaaggtgaaggacaaggaagataagaaaaaaaagaagccgaaa
attattaaatctgaggtggaagatttggctgactctcttgggaatgcagatggacttaca
tcagtgtctcagaatttttcccctctccctctgtcgtctatcaaagaggaacctcttgaa
gatatgaaaccatgccttgaaataaatgaaatatcatccagcttctttttccttcttttg
gagatactgtttgtggaaggacctgctactctctctgtgcttgaagataaagttcttgat
tggcaatcttctcatgccagtgcactaaataactggttttcctttgcccctaattggtct
gaattagttttacctgccttgcagtatttggcaggcgacagcagagatgctccttccagc
ttctcaccttttgttgaattcaaagaaaaaactcagcagtggaaattgcttggtagttac
caagatcatgagaaagaactggcagcactgtttcatctctggttggagactaaagaccag
acttttttcaaagaaaatgaagacagcttggatgccatgccactgcccagagtaaggact
gactatgtagtccggcctagcactggagaggagaaacgagtgtttcaagagcaggagcgt
taccgttacagccagccccacaaagctttcaccttccggatgcatggcttcgagtcagtt
gttggtcctgtgaagggggtatttgacaaggaaacctccttaaacaaagcccgggaacat
tctctcctgcgctcagacagaccagcatatgtcaccattttgtcccttgttcgtgatgct
gctgctcgccttcctaatggagagggaactcgagctgaaatctgtgagctgctcaaagat
tcccagttcctagctccagatgtcacaagtgctcaggttaacactgtcgttagtggtgct
ctggaccgactgcattatgagaaagatccctgtgtgaaatacgatattggacggaagttg
tggatctacctgcaccgggacaggagtgaggaagagtttgaacggatccatcacgctcaa
gctgctgcagcaaaggccaagaaagctcttcagaagccaaaacctccagctaaaatgaag
tcaagtagtaaggagggcgctgtgaaagccctccccaccagcacagcagagcctagtcat
ctgagcctcagtgactccagcatgccaccaactcctgtgactcctgtgacaccaactgca
cctgcattgcctgcaacacccatctcacctccaccagtgtctgcagtcagcaagagtgta
tctggtgctgggtcagagacggcaaaacccagccagagtgttctcctcgtgtcttccccc
accatgccccagctggggacgttgctgtccccagctcagagctcacaggtgcagccaggg
ccagtgcccaccccgcgtgtggtgagtcacagcagctcctcaggcctgccacaggtccgc
gtggtcactgcccaagccagtctcccagccgtgtcccagcaagccccagtggtcacccag
cagcagcagcagcccacatcagtgcctcaagtccgtgttccagctacatctgcacaaacc
aaagtgctccctcaggctgtgatgactctgcctgtaaaagctcaaagtagccccgtgcag
gtgccgagagcaggaagctccatggccagccaggcaggtatcagtgtgacagggctgcct
gcagtgcccagccctgctgtgaagccggttaccagctctccaggcagttctgctgccagc
acctcctccaccactgtcattcagaacgtggctggccagaacatcatcaagcaggtggct
attacaggacaacttggcatgaagacccaggctggaagtggcatcccactcacagcaacc
aattttcggatccaagggaaggacgtgttgcgcctgcccccgtcctccatcaccacagat
gcaaagggacagacagtgctgcgcatcactccagacatgatggccaccctggccaagtca
caagtcactactgtcaaactgactcaggacctcttcacagcagctgcgggaagcagtgct
ggtgggaaaggcatctctgcaactttgcatgtgacatccaaccctgtccagactgctgag
tctccagccaagacaagcacggtatcttctgtctcttccagcccagctggaggcaccgtg
gttaaagtgactcctgacttaaagactgcagagccaacaagctctgctttccgtctgatg
cctgccctgggcatgactgtggcagatcagaagagcaaagccataactacagtggcatcc
acggaggccaagccagccgccacaatcagaattgtgcaggggctgggggtgatacccccc
aaagctgggcagaccatcactgtagctactcatgctaagcaggtgccatcatcctcggcg
gtgaacgttgctggcacaggccacacctccttacccaccgtgagtgccacagtgtccaaa
gcagttgctgtggcctcaggagctgcagggacccccataaccatcggcacaggagccacg
gctgtgcggcaggtgcctgtcagcaccacagtggtatctacatcccaggcaggcaaactt
ccagcacggatcacagtgcctctgtcagtgatcagccagccagtgaagggcaagagcgtg
gtcactgcccccatcatcaagggcaatctcggtgccaacatcagtggattaggcagaaat
attatcctgactacaatgccagcagggactaaactgattgctgggaacaagcccgtgagt
tttctgactgcacagcaactacagcagctgcagcagcaaggccaagccacgcaggtgcga
attcaaacagttccagcctcccatctccagcagggaacagtctctggctctactaaagca
gtgtccactgtggttgtgacaacagctccatctccaaagcagacacaggatcagctgtga
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integrated database retrieval system
