KEGG   Cyanistes caeruleus (blue tit): 111940184
Entry
111940184         CDS       T05602                                 
Name
(RefSeq) nuclear receptor ROR-beta-like
  KO
K08533  RAR-related orphan receptor beta
Organism
ccae  Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ccae03000]
    111940184
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ccae03310]
    111940184
Transcription factors [BR:ccae03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    111940184
Nuclear receptors [BR:ccae03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   111940184
SSDB
Motif
Pfam: Hormone_recep
Other DBs
NCBI-GeneID: 111940184
NCBI-ProteinID: XP_023798542
LinkDB
Position
28
AA seq 391 aa
MSRDAVKFGRMSKKQRDSLYAEVQKHQQSQEQSGGAKDEPEPLSRVYTTSVSSGLSDLDD
ISTLSDGLLFDFPLTPDGSSTYYNLDLLASAQPSPDQSSLDVADATLIKQESIYELMLEP
ALLAHGALEGAQLPPDISVLEIDRVAQNVVKSHLETCQYTTEELKRLAWSLYSPEEVRAL
QSKSCEAMWQQCSLQISNAIQYVVEFAKRIDGFMELCQNDQIILLKAGCLEVLLIRMIRA
FNPLNNTILFEGKFGGMQMFKSLGCDDLIGAVFELGRTLCRLQLSDEELALFTAAVLLSP
DRPWLTESKKVQKLQDKIYVALQHEIQKKHSTEDKLSKMVSKLPLMKTICNLHLDKLEFF
RLLHPETAMNFPPLYKEVFNSELQYSDPRES
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgtcccgcgatgcggtgaagttcggccgcatgtccaagaagcagcgggacagcctctac
gccgaggtgcagaagcaccagcagagccaggagcagagcggcggcgccaaggatgagccc
gagcccctgagccgcgtctacaccacgagcgtcagcagcggcctctcggacctggacgac
atctccacgctgtcagacgggctcctcttcgacttcccactgacccccgatggcagcagc
acctactacaacctggatctgctggcctcggcgcagccctcgcccgaccagtccagcctg
gacgtggccgatgccacgctcatcaagcaggagtccatctacgagctgatgctggagccg
gcgctgttggctcacggggcgctggagggtgcccagctgccccctgacatctctgtcctg
gagatcgaccgggtggcccagaacgtggtgaagtcgcacctggagacgtgccagtacaca
acagaggagctcaagcgcctggcctggagcctctactctcccgaggaggtccgtgccctg
cagagcaagagctgcgaggccatgtggcagcagtgctcgctgcagatctccaacgccatc
cagtacgtggtggagttcgccaagcgcatcgacggcttcatggagctctgccagaatgac
cagatcatcctcctgaaagccggttgcctcgaggtgctcctgatccgcatgatccgagcg
ttcaaccccttgaacaacaccatcctcttcgagggcaagttcggtgggatgcagatgttc
aaatctctcggctgtgacgacctcatcggtgccgtcttcgagctggggaggaccctgtgc
cgcctgcagctgtcagacgaggagctcgccctcttcactgctgctgtcctgctctcccca
gaccgcccgtggctgactgagtccaagaaggtgcaaaagctccaggacaagatctacgtg
gccctgcagcatgagatccagaagaaacactccaccgaggacaagctctcgaagatggtt
tccaagctgcccttgatgaagaccatttgcaacctgcacttggacaagctggaatttttc
cgtctcctgcacccggagactgccatgaacttcccccccctctataaggaggttttcaac
tcggagcttcagtacagcgacccccgggagagctaa

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