KEGG   Cyanistes caeruleus (blue tit): 111940241
Entry
111940241         CDS       T05602                                 
Symbol
WDR18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ccae  Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ccae03009]
    111940241 (WDR18)
Ribosome biogenesis [BR:ccae03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    111940241 (WDR18)
SSDB
Motif
Pfam: WD40 WD40_alt ARID WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_WDR75_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_IP5PC_F
Other DBs
NCBI-GeneID: 111940241
NCBI-ProteinID: XP_023798603
LinkDB
Position
28
AA seq 695 aa
IQRAQMAALAAMRAAAAGLSHSPSPGLSDESQASEEEEEEERGEEEEDGGGYQQEMGSEE
EEDLKGKWDEDEFEEDLGEEEEEEEEEEEEEDYEEEEDMGEEGLSSAEAVRAGAGSLLLR
KPPAPQHYRGEPPRLPGGQERLPPGLGHAQPPPPAPDHGDWTYEEQFKQLYELDGDPRRK
EFLDDLFSFMQKRGTPVNRIPIMAKQVLDLYMLYTLVTEKGGLVEVINKKLWREITKGLS
LPTSITSAAFTLRTQYMKYLYPYECEKRGLSNPNELQAAIDSNRREGRRQGFGGSLFAYS
PGGTHGLLSSPKLPVPALGLASATNAPCGPPSPDQLQQKIICPGPVTCLTASPNGLYVLA
GVAESIYLWEVSNGNLLAILNRHYQDLTCLCFTDDSSHFLSGAKDCLALVWNLYSVLQAE
PSQIPDPRHVWSRHSLPITDLCCGFGGPLARAATASLDQTAKLWEVSSGELLLSVLFDVG
IMAVTLDLSEYHMFCGGMDGSIFQVDLCAWPVQRDRTFQSERENTKVFKGHRNQVTCLSV
STDGSLLLSGSHDETVRLWDIQSKQCLKTMNHKGPVTNAFIVLAPANMFNPDGKPSVPLP
KFSRHLHGTESSDEPGTEGVTLRLGLHQQEPGQSYLEKAERMYSQMHSTREKNLVGDQEH
LTIQVSELEEEVSNLRKINKDLFDFSTRIITKPAK
NT seq 2088 nt   +upstreamnt  +downstreamnt
atccagcgggcacagatggctgccctggctgccatgcgggcggccgccgctggcctcagc
cactcgcccagcccgggcctgtcggatgagagccaggcctccgaggaggaggaagaggag
gagcgtggcgaggaggaggaagatggtggcgggtaccagcaggagatgggctccgaggag
gaggaggacctaaagggcaaatgggatgaagatgagtttgaagaagacctgggtgaggag
gaagaggaagaagaagaggaggaggaggaggaagactatgaggaagaagaagacatggga
gaggaagggctcagctcagcagaggcggtgcgggcaggcgcgggatccctgctgctccgc
aagcccccagcaccccagcactaccggggggagccaccacggctaccagggggacaggaa
cggctgccccccggcctgggccatgctcagcccccgccaccggcacctgaccatggtgac
tggacctacgaggagcagttcaagcagctgtacgagctggatggtgaccccaggaggaag
gagttcctggacgacctcttcagcttcatgcagaagcgagggacccccgtgaaccggatc
cccatcatggccaagcaggtgctggacctgtacatgctgtacacgctggtgaccgagaag
ggggggctggtggaggtcatcaacaagaagctgtggcgggagatcaccaaggggctgagc
ctgcccacgtccatcaccagcgcggccttcaccctgcgcacccagtacatgaagtacctg
tacccctacgagtgtgagaagcgcgggctgagcaaccccaacgagctgcaggcggccatc
gacagcaaccggcgggagggccggcggcagggcttcggcggctccctcttcgcctactcg
cccggcggcacccacggcctcctctcctcgcccaagctgccagtgccggcgctggggctg
gcatctgccaccaacgctccctgcggacctcccagccctgaccagctgcagcagaagatc
atctgtcccgggcctgtgacctgcctgacggcctctcccaacgggctctacgtcctggcc
ggggtggccgagagcatctacctgtgggaggtgtccaacgggaacctcctcgccatcctg
aaccgacactaccaggacctcacgtgcctctgcttcactgatgacagcagccacttcctc
tcaggggccaaggactgcctggccctggtgtggaacctctacagcgtgttgcaggcagag
ccctcccagatccctgacccccggcacgtctggtcccggcacagcctccccatcaccgac
ctgtgctgcggctttggagggcccctggcacgggctgccactgcctccctcgaccagaca
gccaagctctgggaagtctcctctggggagctcctgctttccgtgctcttcgacgtgggg
atcatggctgtgactctggacctctctgagtaccacatgttctgcgggggcatggatggg
tccatcttccaggttgacctctgtgcctggccagttcagagagaccggaccttccagtca
gagcgggagaacacgaaggtcttcaaagggcacaggaaccaggtgacatgtctgtcagtc
tccacagacggcagcctcctgctctcgggctctcacgacgaaaccgtccggctgtgggac
atccagagcaagcagtgcctgaagacgatgaatcacaaaggtccagtgacaaacgccttc
atcgtgctggcccctgccaacatgttcaaccctgatgggaagcccagcgtgcccctgccc
aagttcagccgacacctgcacggcaccgagagcagcgacgagccgggcactgagggggtg
acactgcgcctggggctgcaccagcaggagcctgggcagagctacctggagaaggcagag
aggatgtactcgcagatgcactccacgagggaaaagaacctggtgggagaccaggagcac
ctgacgatccaggtgagcgagctggaggaggaggtgagcaacctccggaaaatcaacaag
gacctctttgacttctccactcgcatcatcaccaaaccagccaagtga

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