Cyanistes caeruleus (blue tit): 111940513 Help Entry 111940513         CDS       T05602                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae04510   Focal adhesion ccae04512   ECM-receptor interaction ccae04518   Integrin signaling Brite KEGG Orthology (KO) [BR:ccae00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     111940513 (COL2A1)    04518 Integrin signaling     111940513 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     111940513 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ccae00536]     111940513 (COL2A1) Glycosaminoglycan binding proteins [BR:ccae00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    111940513 (COL2A1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  111940513 NCBI-ProteinID:  XP_023799003 LinkDB All DBs Position LGE22C19W28 AA seq 1072 aa AA seqDB search MDLKLGKGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGETGP AGPQGAPGPAGEEGKRGARGEPGAAGPLGPPGERGAPGNRGFPGQDGLAGPKGAPGERGP AGLAGPKGATGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGA RGQPGVMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGE QGAPGPSGFQGLPGPPGPPGESGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGL QGPRGLPGTPGTDGPKGATGPAGPNGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGP EGAPGKDGARGLTGPIGPPGPAGPNGEKGESGPPGPSGAAGARGAPGERGEPGAPGPAGF AGPPGADGQPGAKGEQGEPGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGA TGFPGAAGRVGPPGPNGNPGPPGPPGSAGKDGPKGARGDAGPPGRAGDPGLQGPAGPPGE KGEPGEDGPAGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGSAGD RGPPGPVGPPGLTGPAGEPGREGNPGSDGPPGRDGAAGVKGDRGETGPVGAPGAPGAPGA PGPVGPTGKQGDRGETGAQGPMGPSGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGF TGLQGLPGPPGPSGDQGAAGPAGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGE PGPAGPPGNPGPPGPPGPPGTGIDMSAFAGLGQPEKGPDPGRYMRADEAVPGLRPHDAEV DATLKALNNQIESIRSPEGSRKNPARTCRDIKLCHPDWKSGDYWIDPNQGCTLDAIKVFC NMATGETCVYPSPGSIPRKNWWSSKAKEKKHVWFAETINGGFHFSYGAEDLAPNTANIQM TFLRLLSTEGSQNVTYHCRNSVAYLDEESGSLRKALLIQGSNDVEIRAEGNSRFTYSVLE DGCTKHTGKWGRTVIEYRSQKTSRLPIVDIAPMDIGGPEQEFGVDLGPVCFL NT seq 3219 nt NT seq  +upstreamnt  +downstreamnt atggatttaaaattgggcaagggcgctccaggcatcgccggcgctccaggattccccggc ccccgcggcccacccggaccccagggagccaccggccctctgggccccaagggacagacg ggcgaacctggcattgcgggattcaaaggcgagcagggacccaaaggagagacgggccct gcaggaccccaaggtgcccccggaccagctggggaggaagggaagagaggagcccgcgga gaacccggagctgccggacctttgggtccacctggagagaggggcgctcccggcaaccgt ggcttccctgggcaggatgggctggctggccccaagggggccccgggtgagcgcggcccc gctggcctggccggccccaaaggagccactggcgaccccggacgccctggagagcctggc ctgcctggagccaggggtctcacgggccgccccggggatgctgggccccaaggcaaagtt ggccccacaggcgcccctggcgaggatggacgccctggaccccccggcccccagggggct cggggccagcctggcgttatggggttccctggtcccaaaggtgccaatggtgagcctgga aaagccggtgaaaaaggacttcccggagcgccagggctgaggggacttcctggaaaggac ggagagactggagctgctggacccccgggacctgctggcccagcaggggagaggggagag caaggagcccccggcccctccggcttccaggggctgccagggccaccaggtccccccggc gagagtggcaaacccggagatcagggtgttcctggagaagctggagcccccgggcttgtg ggtcccaggggcgagcgcggcttccccggcgagcgcggctctcccggcgcccagggcctg caggggcctcgcggcctccccggcacccctggcactgatggacccaagggtgccactggc cctgctggccccaacggagcccagggacccccaggactgcaggggatgcctggggagaga ggagcagccggcatcgctggtcccaagggggacaggggagacgttggagagaagggaccc gagggagcccccggaaaggacggagctcgcggtctgactggtcccattggcccccctggc cctgctggccccaatggcgagaagggtgagtccggcccccctggcccgtctggagctgcc ggtgcccgtggtgcccctggagagcgcggagagcccggagcccccggccctgctggattt gccggacccccgggcgctgatggccagcccggagccaaaggcgagcaaggggagcctggc cagaagggtgacgctggagctcccgggcctcaaggtccttccggggctcctggaccgcag ggtcccacaggtgtcactggtcccaaaggagctcgaggcgctcagggacccccgggagcc actggattccctggagctgccggacgcgtcggaccccctggcccaaacggtaaccccggc ccccccgggccccccggctccgcgggcaaggacggccccaagggcgcgcggggcgacgcg ggacccccgggccgagcaggggacccagggctgcaaggccctgccggcccccccggcgag aaaggcgagcccggcgaggacggccctgcgggtccagatggtccccctggtccccagggg ctggcaggacagcgcggcatcgtggggttgccggggcagcgcggcgagcgtggattccca gggctgcccgggccctcgggagagcctggaaaacagggagcacctggatctgccggtgac cggggaccccctgggcccgtgggaccccccgggctgacggggccagccggagagcccggc agggagggaaatcccggctctgacggacccccaggcagggacggggcggccggggtgaag ggtgatcgtggggagaccggccccgtgggtgctcccggtgctcccggagctcctggcgct cccggccccgtgggacccactggaaaacagggagacagaggagagacgggtgctcagggt cccatgggtccctctggccccgctggcgctcggggaatgccgggtccccaggggccacgc ggtgacaaaggcgaggcgggcgaggccggcgagcgtggcctgaaggggcaccggggcttc acagggctccaggggctgcccgggccccccggtccttctggagaccagggtgctgccggg ccagcaggtccctctgggcccaggggtccccctggccccgtgggcccctcgggcaaggac ggctccaatgggatgcctggacctatcggcccccctgggccccgcgggaggagcggcgag cccggcccggcgggtccccccgggaaccctggcccacctggcccgcccgggccccccggc accggcattgacatgtcagcgttcgcggggctggggcagcctgagaagggccccgacccc gggcgctacatgcgggcagatgaggcggtgccagggctgcggccgcacgatgccgaggtg gacgccaccctcaaggccctcaacaaccagatcgagagcatccgcagccctgagggctcc cgcaagaacccggccaggacctgccgagacatcaaactctgccaccccgactggaagagc ggcgattactggatcgaccctaaccagggctgcaccctggacgccatcaaggtcttctgc aacatggccacaggggagacgtgtgtgtaccccagccccggcagcatccccaggaagaac tggtggagcagcaaagccaaggagaagaagcatgtctggtttgccgagaccatcaatggt ggcttccacttcagctacggcgctgaggacctggcacccaacacggccaacatccagatg accttcctgaggctgctgtccaccgagggctcccagaacgtcacctaccactgccgcaac agcgtggcctatctggacgaggagtcgggcagcctgaggaaggcgcttctcatccagggc tccaatgatgtcgagatccgtgctgagggcaacagccggttcacctacagcgtgctggag gacggctgcacgaaacacaccgggaagtggggcaggactgtcatcgagtaccgctcacag aagacctcgcgcctgcccatcgtggacattgcacctatggacattgggggacccgagcag gagtttggggtcgacctcggccccgtctgcttcttgtaa

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