Cyanistes caeruleus (blue tit): 111940642
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Entry
111940642 CDS
T05602
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111940642 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
ccae04091
]
111940642 (FREM1)
Lectins [BR:
ccae04091
]
C-Type lectins
Lecticans
111940642 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Beta-prism_lec
Motif
Other DBs
NCBI-GeneID:
111940642
NCBI-ProteinID:
XP_023799212
LinkDB
All DBs
Position
Z
AA seq
2136 aa
AA seq
DB search
MKPFEQSSLFLLLPVVFRVVCSSFISVNLGMKVMKGQSVFLSEEDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDMVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEVPEYYGLSRVIDKNILTFDYDRKINLDCSISIISSETH
LPAHGQLIARKVRQEQFRGDQPRGFFPGTKRSLGQHCKNGSCTLGLGVINNKKMSCEEFL
GMGIQYQHLYPPSPDTDYIPVRLDLSDSRSKTLHKTEYAWLPVRIRGAVPNQIPKATPMA
KFILEVDQFILTPITTTTIDAEDNETPKSLLIFNITKPPPQGFITHLSDHTKPVGSFTWK
DLSDMLIAYQPPNNSHTERRNYEVEFEVHDLYFERSLPIAVHLSIRTTDTNAPRVSWNTG
LNLLEGQSRPITWQQFQIVDNDDIQNVRLVTVDGLQHGRLSVRGQKGFLFTVSDIQAGVV
HYHHDDSDSTKDFVVFRIFDGPHSIRHKFPINILPKDDSPPFLISNVVIVVHEGQTMLIQ
SSMLHASDMDSSDDYILFNITKPSQAGEIMKKPGPNLIGYSVNSFLQRDLFNGIIYYRHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREVPGATRHLVVKETEISHL
TKKHLHFTDVEEQDRELTYNITTSPFFSCSHGYSDAGKLFMVDTIPKLVKDPAALALQSF
TQHAVNYMKVAYMPPLQDIGPEPQQVQFIFSVSNQHGGTLYGICFNITILPVDNQAPEVF
TTHLRVEEGGMTPITEGHILISDADTKREHLFLLLQRQPQHGVVELDDIPMKGGDRLSYE
DLCTLAVRYRHDGSETLTDDVFFSATDGIHFVEFILHVKVLPVNDQLPVMQTGLVPVLHC
LEGEAVVLSSQHIYATDADSDDMELMFMLARQPYQGVVRKAGIAVDRFSQADVVAGLVTY
KHTSGEIGLTPSIEILTLIVSDGEAGLDVKDCCYDGPRSPPVSRDDPFPVYDLNITVLPV
DNQPPSIATGASFVVEEGSSAALTTNHLFATDPDTTADDLEFVLVSPPQFGYIENILPSP
GFEKSNMGISIVSFQLKHLKAMNINYVQARHLQMEPTEDKFVLYVTDGLHRSAEIPFFVL
ISPTNDEVPEFITRNITVQEGEMKELNLSVINAVDLDVPQDPLVFRVVQRPLYGFLINGV
HGGDVLHYRDLINHDHHSHGLLVHDFSMELLRNGMKLMYMHDNSENLTDSFRIQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKNNIEVNIGETQIISSAVLSAEDKDTPRERIYYLFERL
PENGQLQLKVGQEWVTLRTGMKCTQEEVDMNLVRYVHTGAVGSKKKDSFTFYLWDGYNRS
PAVDFYVNIKDLEKGDIVVFTKLLSVPKGDHSCITTDVLLALDGTDKPEELLYVITSPPQ
YGQIEYISYPGISITSFSQMDVARQIVCYVHKAKAAAREDTFRFIISNGLRTKHGTFKIA
LEAADQALPTLSRNMGLRLTEGSMALLTSDVLQLSDPDTAKENLTFVLAQLPQYGHLYYH
GDVLLQYNFTQQDVDNRDVAYKHRGGNSQIDRFTFVATDRTNQGFIVNGRVQSKPVAFTI
QVDHLDKMAPKIIHLHCFSDVELLKNGNYGIFITAKSLRASDPNTEDDKIIFKILRGPHY
GYLENITTGGFIQEGFSQKDLNSKIILYVINQSQEVNSDNLEFQVTDTSGNSAAPQRLEL
RWSRIEMLQTEYEVCENMGVMSLKITRAGHSGESAFITVKVNEISARLGKDFTVTSSKLV
QFDPGVSTKMWNVAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVKILDSKGGQCSYS
RSSGQSKHDFWGRGTLFPVSLGSSSPSRPGNVSLEGIPLPPSKGMREHGGDLQQERSLAN
RSRTRLRVTGNGRIVQPSSVFRNETDVVFKYHGIVSLKTEEDTSFAETNKKAQPQINVIS
FRKTEIPQADKAELAVQPRSRHKEVAMKKCPSGWTYHEGSCYFLVLNHRVTWNTAAQACR
EQYLGSLTSVANEQHMRWLWDFSGKRPFWIGLNDQVNPGHWEWNGGEPVTYMNWRRSSHH
FPVKGRNCVFVQKQGKWQATDCKKVKPNSYMCSRKL
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atgaagccatttgagcaaagctcattgtttctgctgctgccagttgtgtttagagttgtg
tgctcctcctttattagtgtgaaccttgggatgaaagtgatgaagggacagtctgtcttc
ctgtcagaggaagacctcaagttctccatccccagagagaaggatgtctgcaaagtagaa
gttgtgattaatgagccaataacacagagggttgggaaacttactccacaggtttttgac
tgtcacttccttcctaatgaagtcaaatatacccacaatggatgtccaattttagatgaa
gacatggtcatgcttaggctgtacaggtttacagaaacggaaacatttgtagaaacattc
acccttcatgtacagttacttgagccagactgtaacatcataaaaatgcgctcccatgct
ttggaggtccctgaatactacggtctctctagggtgattgacaagaatatcctcaccttt
gattatgacagaaagataaacctggattgctccatttccataatctcttcagaaactcac
ctgcctgctcatggccagcttattgcccggaaagtgcggcaagagcagtttcgtggagat
cagccacggggcttcttccctggtactaagcgcagcctgggccaacactgcaaaaatggg
agctgtacactgggactaggagttattaacaacaaaaagatgagctgtgaagaatttctg
gggatgggaattcagtatcaacacctctaccccccctcacctgacactgattacatcccc
gtgaggttggatctctcagacagcagaagcaaaactctgcacaagacagaatatgcatgg
ctccctgttcggattagaggtgctgttcccaaccaaatacccaaagctaccccaatggca
aagttcatcctggaagtagatcagtttattttaacccctattacaaccacaaccattgat
gccgaagacaatgaaactccaaagtcccttcttatattcaacattaccaagccacctcca
cagggctttatcactcacctctctgaccacacaaaacctgttggctccttcacgtggaag
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacggagaggagg
aattatgaggtggaatttgaggtgcatgacttgtactttgaaaggagtttaccaatcgct
gtgcatctttctatcagaacaacagatacgaatgcccctcgtgtttcatggaatacaggc
ctcaacctcctagagggacaatcccgacccatcacatggcaacagttccaaattgtggac
aatgatgacatccaaaacgttcgcttggtcacagttgatggcttacagcatgggcggctg
tcagtgagaggacagaaaggattcctgttcaccgtctctgacattcaggctggggttgtt
cattaccatcacgatgacagtgattctactaaagactttgtggtatttagaatctttgat
ggcccccacagtattcgacataagtttccgataaatatcctcccaaaagatgatagccct
ccatttctgatcagcaatgtggtcattgtagttcacgaggggcagacaatgctgattcag
agctccatgcttcatgcttcagacatggattccagtgacgactacatactattcaatatt
accaagccatcacaggctggagaaatcatgaagaaaccaggaccaaacttaatagggtat
tctgtcaacagttttcttcagagggatctatttaatggcataatttattatcgtcatttg
ggaggagaagtgtttgaagattcccttgagtttgtgctatgtgatagccatgaccctcca
aatctctcagagccacaggtgatgatggttcacattatccctgtggatgaccagctaccc
agagaagttcctggagcaacccgtcacctggttgttaaggagactgagatttcccacctc
actaagaaacatctccacttcacagatgtggaagagcaagacagggagctcacatacaac
ataaccacttccccatttttctcttgcagccatggctactcagatgctgggaagctattt
atggtggacaccatccccaaattggtcaaggatcctgctgctcttgcactgcagtcattt
actcagcatgctgtgaactatatgaaagttgcttacatgccacccctgcaggacattgga
cctgaacctcagcaagtccagtttattttttctgtcagcaatcagcatgggggcactttg
tatgggatctgcttcaatattacaattcttcctgtggacaatcaggccccagaggtcttt
acaacccatttgagagtggaagagggtggcatgacccctattacagaaggacacattctc
atctctgacgcagacacgaaacgggagcatctcttcctgctcctgcagaggcagccgcag
catggggtagtggagctggatgacattcccatgaaaggaggggacaggctttcctatgag
gacctgtgtaccctggcagtcagatatcgtcatgacggctcggagactctcactgatgat
gttttcttttcagccacagatggcatccattttgtagagttcatcctgcatgtcaaggtg
ctgcctgtgaatgatcagctacctgttatgcaaacaggccttgttcccgtgctccactgc
ctggagggtgaagcagtagttctctcctcacagcacatttatgccacagacgcggacagc
gatgacatggagctgatgttcatgctggcccgccagccctaccagggcgtagtgaggaaa
gctggcattgccgtggatcgtttctcccaagccgatgtcgtcgctggtttagtcacatac
aagcacactagcggtgagattggcctgactccttccattgagatcttaaccttgattgtc
tctgatggtgaggctggcctagatgtgaaagactgctgttatgatggacctcgttctcct
ccagtttcacgtgatgatccatttcctgtctatgaccttaacatcactgtacttccagtg
gataaccagcctccatcaattgcaactggtgcaagttttgtggtggaggagggctcctca
gcagcccttactaccaatcacttatttgccactgaccctgacaccactgcagatgactta
gagtttgtgttggtttctcctccccagtttggctacattgaaaatatactgccttctcct
gggtttgagaagagcaacatgggaataagcatagtttcatttcagctgaagcacctgaaa
gccatgaatataaactatgttcaagctaggcacttgcaaatggagccaacagaagacaag
tttgtactttatgtcactgatgggttacatagatcagcagagatcccattttttgtgcta
atcagcccaaccaatgatgaagttccagaattcataaccaggaatattactgttcaggaa
ggagagatgaaagagctgaacctgtctgttatcaatgcagttgatctggatgtgcctcaa
gaccctctggtgttcagggttgtgcagaggcccttgtacggattccttattaatggtgtt
cacggcggtgatgttctacattatagagacttaattaaccatgatcaccacagccatggc
ttgcttgttcatgacttttccatggagctactgaggaatggaatgaagctgatgtacatg
catgacaactctgaaaacctcactgacagctttagaattcagctatcagacggaaaacat
aaagtcctcagaaccatttcagtgaaagtcattccagttaatgatgagaaaccagtgctg
agcaagaagaacaatatagaggtgaacataggtgaaactcaaataatttctagcgctgtt
ctgtcagcagaagataaagatacccccagggagagaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggacaagagtgggtgactctccgaacagga
atgaagtgcactcaggaagaggtggatatgaaccttgtgagatatgtccacacaggagct
gtgggatccaagaaaaaagacagcttcacattttacctctgggatgggtacaacagatcc
ccagctgtggacttctacgtaaatatcaaggacttggaaaagggagacatagtggttttt
acgaaacttttaagtgtgccaaaaggggaccacagctgcattacaactgatgtcctcctt
gcactggatggtactgacaagccagaggagctcctttatgtgataacctccccaccccag
tatggacaaatagagtatatcagctatcctggcatctccattacgagcttcagtcaaatg
gatgtagcacgacagattgtctgctatgttcacaaagccaaggcagctgctcgtgaagat
acattcagattcatcatcagcaatggactgaggactaagcatgggacattcaagatcgcc
ttggaggcagctgaccaggctttgcccactctttctaggaacatggggttaagattaaca
gaaggatctatggcacttcttacttctgatgtcctgcagctttcagacccagatactgcg
aaagaaaaccttacctttgtcttggctcagctcccccagtatgggcatctctattatcat
ggggatgtgctactgcagtacaatttcacacagcaagatgtggacaacagggatgtggca
tacaagcaccgaggtgggaattcccagattgacagatttacatttgttgccacagatagg
actaaccaaggcttcatcgtgaatgggagggtgcagagcaagccagtggcattcaccatt
caggtggatcatttggacaaaatggcaccaaaaatcattcatctccattgcttttctgat
gtggaactgctgaagaacggcaattatgggatctttattactgccaagtccctgagggca
tctgaccccaatacagaagatgacaaaataatttttaagattttgcgaggtcctcattat
ggctacctggaaaatataacaacaggtggattcattcaggaaggatttagccaaaaggat
ttaaacagcaaaatcatactttatgtcatcaaccaatcacaagaagtgaattcagacaac
ttggagtttcaagtgacagacaccagtggaaactctgcagcaccccaaaggctggagctg
cggtggtctcgaattgaaatgctgcagactgaatatgaggtgtgtgaaaacatgggagtg
atgtctctgaaaatcaccagggcaggacactcgggggagtctgcctttataaccgtgaag
gtcaatgaaatatctgctaggctgggaaaggacttcactgtgacttcctccaagcttgtt
cagtttgatccaggagtgtcaaccaagatgtggaatgtagcaattacctatgacggatta
gaagaagatgatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggc
acacggacaaaagctgtagtgaaaattttggactcaaaaggaggtcaatgcagctattcc
cgctcttctggccaaagcaagcatgacttctgggggagaggcacactgttcccagtttcc
ttgggctcctcatcaccttccaggcctggcaatgtttccttggaagggatcccactgcct
ccctccaaagggatgagagagcacggaggggacctgcagcaggagcgcagcctggcgaat
cggtcaaggaccaggctgagagtaactggaaatggcagaatagttcagccttcatctgta
tttagaaatgaaacagatgtggttttcaaatatcatgggattgtatcactcaaaacagag
gaagacacctccttcgctgaaaccaacaagaaggcacaaccacagataaatgtcatctcc
ttcaggaaaacagaaatcccacaggctgataaggcagaacttgcagttcaaccaagatca
agacataaggaggtagctatgaagaaatgtccctctggatggacttatcatgagggcagc
tgctacttcctggtgctgaatcacagggtcacctggaacactgctgctcaggcttgcaga
gaacaatacctggggagtctaacaagtgtggctaatgaacaacatatgcggtggctgtgg
gacttcagtgggaagaggcccttttggattggtttgaatgaccaagtcaaccctggacat
tgggagtggaatggaggagagcctgtaacctacatgaactggagaagaagctcccaccac
tttccagtgaaaggaagaaattgtgtatttgtgcagaagcaaggaaaatggcaggcaact
gactgcaagaaggttaagccaaacagctatatgtgttcaagaaagctgtaa
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integrated database retrieval system
