Cyanistes caeruleus (blue tit): 111940644
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Entry
111940644 CDS
T05602
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111940644 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111940644 (SMARCA2)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111940644 (SMARCA2)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111940644 (SMARCA2)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111940644 (SMARCA2)
Chromatin remodeling factors
BAF complex
111940644 (SMARCA2)
PBAF complex
111940644 (SMARCA2)
GBAF(ncBAF) complex
111940644 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
111940644
NCBI-ProteinID:
XP_023799213
LinkDB
All DBs
Position
Z
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGIVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPLSGGGPTPPQMTPSQTGPIIAGDPQAMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGAATGP
GSAPGMPGHTTAITPKTWTEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQEENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagatcctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccgtctcctggctctgtt
cacagcatgatggggccaagtcctggtccacccagtgtcccacatccaatgccgacaatg
gggcctactgattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaattgttgaagatgttcactgtggctccatgaagagtatgcgacctccc
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccgcacccatctccactaggagcaccagagcatgtgtccagtccactgtctggaggaggt
ccaacaccacctcagatgactcccagtcagacagggcccattatagcaggagacccacaa
gctatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctagcatacaaaatgctggctaggggtcagcccttaccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcccggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatgcaatgagtggtgctgcaactggacca
gggtctgcaccagggatgcctggacatacaactgccattacccctaaaacctggactgaa
ggccaagccccagatatgagtgtctccaatgcacaacaaaagcttccagcaccagctcct
agtgggaggccttctcctgctcccgctgctgcccagcctgctgccacaatgcctgggccc
tctgtaccacagcccccacctggacaaccttcacccattgtccagctgcagcaaaagcag
aaccgcatcagccctatccagaagccacaagggctggatcctgttgaaatacttcaagaa
cgtgaatatagacttcaggctcgaattgctcacagaattcaggaactagagaacttgcct
ggttctctcccccctgatctgcgaaccaaagctacagtggagttgaaggcacttaggcta
ctgaacttccaacgccagttaagacaagaggtggtagcctgcatgcgtcgtgacacaaca
cttgagacagcattgaactccaaagcctacaaacgaagcaagcgccagactttgagagag
gctcgtatgacagaaaagcttgaaaaacagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttcaaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggctaccgtaagctgattgatcaaaagaaggacagacgc
ttggcttacctgttgcagcaaacggatgagtatgtggctaacttgactaacctggtatgg
gagcataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
ctccttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaggttgctcccagatcagatagtgaggatgaaagtggctctgaatatgaggag
gaggatgaagaagaagaatcaagcaaattagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagacgcaaagcaaatcattgagacagccaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcactgaaagggtggaaaagcagtcttcccttcttatcaatggcacatta
aaacattatcagcttcagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacagactattgctctcatcact
tacctaatggagcacaaaagactcaatgggccctatctcatcattgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaac
gttcttttaacgacttatgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagacgagggccatagaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaattctgctgactgggactccgttg
cagaacaaattgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacctttgaacagtggttcaatgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgagtctcagctgccagaaaaggtggaatat
gtgatcaaatgtgacatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
ggaatccttctcacagatggttctgaaaaagacaagaagggaaaaggcggagcaaaaact
cttatgaacactatcatgcaattgcgaaaaatatgcaatcacccctacatgttccagcac
attgaggagtccttcgctgaacacctgggctactcaaatggtgtcattaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgtgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgtcttgatggcacaacaaaatcagaggat
cgagctgctctgttaaagaagttcaatgagcctgggtcacaatactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttt
gacagtgactggaatcctcatcaggacttgcaggcccaggacagagctcaccgaattggt
cagcagaatgaagttagagtcctgcggctgtgcactgtgaacagtgtggaagagaagata
cttgctgcggcaaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagcattcctacaagctatactggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cggcgtgaagaggaatttgatctttttatgcgcatggacatggatcgtcgcagggaggat
gccagaaaccctaagcgtaaacctcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggcttacatgtgaagaggaggaagagaaaatattt
ggaagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaagcag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaggtccggcttaaa
aagcgaaaaaggcgaagaaacgtggacaaggattctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagctgtcgcccaatccacccaaactgaca
aaacaaatgaatgctatcattgatactgtcataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagaactaccggagtattatgaattg
atcaggaaaccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgttgctgtgtcacaatgcgcagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaagaagaagaatcagaatcagaatcaaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagaggaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
