Cyanistes caeruleus (blue tit): 111940702 Help Entry 111940702         CDS       T05602                                  Symbol FOCAD Name (RefSeq) focadhesin isoform X1   KO K27498   focadhesin Organism ccae  Cyanistes caeruleus (blue tit) Brite KEGG Orthology (KO) [BR:ccae00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccae03019]     111940702 (FOCAD) Messenger RNA biogenesis [BR:ccae03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      111940702 (FOCAD) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Focadhesin DUF3730 Motif Other DBs NCBI-GeneID:  111940702 NCBI-ProteinID:  XP_023799301 UniProt:  A0A8C0UNL7 LinkDB All DBs Position Z AA seq 1803 aa AA seqDB search MLDDIKKRFEFPNAVVQSQAVGHLIAAILKEKVSSNKIRQASDQTPALNLLWEKCCSENV ALRTACCEGLVALVVEKHAELDYVLHGALNLIPSARNVHGLVKTICKLIQIQAIQLGKDG EESVWSLYAIRSTPHPLITVLENRPDCWPVLLQQITVFFHQCPERAEGLCVGIMASFLRY LYCEPSQLREYAELRMGLLKILLQPHGPKSKEAPSMLECEILQLLCDLIPHLQLKDLLQV TEALFFLQELFLSLLRYPSFWKVQLSQLSLQLLCFCEVCLNVTGECSSLISVIEDNFELL KEVFPVDQFVIGLALLLLQTPESQQKSVLSLAYKLLSCSETQDISTTALTLVMPVLQILS STTVGDCLSGDVSGTTRQQLAVNLFGLLKEKSVNDKQESVSYKLLCPITSSYSSLYTTWK MMELLKEKSAVSKWLSSVKSLLPVSTQVPAHVFLLLAYLLVQENGDSLRDVLQATTEIAK ADCSQVPNLIPVLIFKLGRPLEPALYREIMYTLPTLGVHKVCVAQILRAIHMLGSTPKLR AIASRLMTSLWERQDRIYPELQKFLAMSDMPSVSVDKDAQWEKLIAKAACIRDICRLRPY QHGADMLAAISQVLNECTKPDQASPAAIVLQGLRALCEAEVVCIRSTWNALSPKLSCDTR PLILKALNELFSLVPSLTVNTNEFEKFKAQVISFLWNNTQNEDALVAISAYKSLSSFDSE EHTILHLPEQARPEVNSLEEIDMNEDEEDQEANLFVPGSSYIKLLSLTPAAVLGAFEEFA TSLVKQEMTSMPRAVYHSALRGAATRSDQGKTVAGVPNFLLKMYERNKQPGMTPGLAAGM LLCFDLPVHMGKDGKPINRFLASRGRSFQQMLVALIHEVNIQPSEWHHSILLPQTWLGFM SRTYNAVLQGRQAELEMQLKHGKEDPEEVQYKQFTAWLWVRDMLTDVIKGASKDSPVVKG NSIFALTGLAVAVAKYESSLSSDTEGVPETEPDFIPMKHWIPMVTETLLSIVNSRYQPKG QVFPWFYQKSYSGENTASIIARSCAATALSLLVPIFIVSYKEKIEEVLSMLTDRLPGKPN ADESQAVQIHMGLGLGMFISRLYEEKVSDIPGQQMNLVLMKSVDVLEDCCFDTSLEYNTG CILGVGLVLSFMSHSSQTESRVHVSASLRKLCKYLDTSEYQSRGIQEVLAYSVACSSVSA FSVGIIEAAEAEKAMSKLRTLAEDNQQTYSFALALGAIVHGLSACGHGKAEDLSNRLMPA WIKTVLAEGFPTMERLAAVSGLVALVGSEGGMIQLKSETIQSSQFQSKLNEVIRTLTQII SLSEQIGLQTNAVRLLGRLHMSCLSSTQNRASVPPDFSYLPVNSFIRAAIDFAIESGKKG PESVPAELVKVALAPIALVGESYQYPPVNWASILSPLMRLDFGDEVKHLCLELAVTQAQS SQNAAMLLGMWVAPPLIYSLSMKTLKYLFMSLSLWMQHVAEDKLQSFTEVLLIQQFEVKN RTKRPEICQCVLQGLIQAMKLPNPAQLCWSFLCQAVEKIYELLPNEVQRSELEMYVDVAR CISEMADSEINRIVQISKNNIEKATFMKVYLISQGRLSLTNLSAVIETVAGYQQKENILW MFLHSFYHARIVRHENTGVLKRMDWLLDLMGYIRNAAYRSTPLQNVDLKECIDFLMWLFA ASVLAWADHGAPLLLGLSADWSLCKPHMVSAELSEENIGKHSTDKFAVQETLTLLPNSLS LLLAKEPWKEQTQKFIDWLINMMECPKEALSKSSMDLLKVALLALRSLAEFKKKAVWTKA YGW NT seq 5412 nt NT seq  +upstreamnt  +downstreamnt atgttggatgacatcaagaagcgatttgaatttcccaatgccgttgttcagtcacaggca gtgggccatctgattgctgcaatactgaaagaaaaagtttcttcaaataagatcagacag gcttctgaccagactcctgctctgaacctgctttgggagaagtgctgcagtgagaatgtt gccttgcgaacagcctgctgtgagggtttggtggcacttgtggtggagaaacatgctgag cttgactacgttcttcatggagctctcaacctaattccctcagcaaggaatgtgcatggt ttagtaaaaactatttgcaagttaatacaaattcaagctattcaactgggaaaagacgga gaggagtctgtttggagtctgtatgcaatcaggagcactcctcatccattaattactgtc ctagaaaacagaccggattgctggccagtcctactacagcagataacagtatttttccat cagtgtccagagagggcagagggtttatgtgttggcataatggcttcatttctacgatac ctgtattgtgaaccatcccagttacgggaatatgctgaactgcgaatgggtttacttaag atcttactgcagcctcatggcccaaagagcaaagaagcaccctccatgctggaatgtgag attcttcaacttctgtgtgatttgattccacacttgcagcttaaagatttactgcaagtt acagaagccttgtttttcctgcaagagctgttcctcagcctactacgctatccttcattt tggaaagttcagttatcccagcttagtcttcaactattatgcttctgtgaagtgtgttta aatgtaacaggagaatgctcatctttgatctccgtaatagaggacaactttgagctctta aaagaggtatttccagtggaccagtttgtaattgggctagcacttttactgctgcaaact ccagaaagtcagcagaagtctgtcttgagtctagcctacaagctcctttcatgttcagaa acccaggacatctcaaccacagcccttactttggtgatgcctgtgctacagatcttatct tctacaacagttggagactgcctgtcaggggatgtttctggaactacgaggcagcagctg gctgtaaatctatttggattattaaaagaaaaaagtgtgaatgataaacaggaatcggtg tcctacaaactcctttgccccataaccagctcttacagttcattatatacaacctggaag atgatggagctcctgaaagagaagtctgcagttagtaagtggttatcttcagtgaagtca ctgctacctgttagcactcaagtacctgcccatgtttttcttttgttggcttatctactg gtccaagaaaatggagacagtcttcgtgatgtactccaggctacaacagaaatagccaag gctgattgttctcaggtcccaaatctgatcccagttctgatatttaaattggggagacct ctggagcctgcactttacagggagataatgtatacattgcctacacttggtgtacataag gtttgtgtagctcagattctacgtgctatacacatgctggggagcacacctaagctcaga gcaattgcctcgcggctgatgacatcattatgggaaagacaggatcgaatttacccagaa ctgcagaagttcctggcaatgtctgatatgccctctgtgtctgttgacaaagatgctcaa tgggaaaagctgattgctaaagctgcttgtataagagatatatgtaggctgagaccatat cagcatggagcagacatgttggctgcaatttcccaggtattaaatgaatgcacaaaacct gatcaagcttcacccgctgccatagtattacagggtctacgggcactttgtgaggctgag gttgtttgtatccgttctacatggaatgctctgtcaccaaagctgagttgtgatacaaga ccactcattttaaaagcactgaatgaattattttcccttgttccctcactaacggtgaat acaaatgaatttgagaaattcaaagctcaagttatcagcttcctttggaacaatacacag aacgaggatgcccttgttgctatttcagcctataaatcactctcatcatttgactctgaa gaacatacaattcttcatcttcctgaacaggcgcggccagaagttaactcactggaagag atagacatgaatgaagatgaagaggatcaggaggcaaatctatttgttccgggctcttca tatatcaagctgttgtctctaacaccagctgctgttttaggagcatttgaagagtttgca acatcacttgtgaaacaggagatgaccagcatgcctcgtgctgtgtatcattctgcctta agaggagcagccacacgctcagaccaggggaagacagtggcaggtgttccaaatttcttg ctgaaaatgtatgagaggaacaagcaaccaggcatgacaccaggccttgcagccggcatg ttgctgtgtttcgacctccctgtccacatgggcaaggatggcaagcctattaatcgattt ctggccagcaggggccgcagtttccagcaaatgttggtcgccctcattcatgaggttaat attcagccttctgaatggcaccactccatactgctgccccagacgtggttaggatttatg agtcgaacctacaatgcagtcctgcaggggaggcaggctgagctggagatgcagttaaaa catggaaaagaagatcctgaagaggtgcaatacaaacaatttacagcctggctgtgggtc agagatatgttgaccgatgtcatcaaaggtgcttccaaagacagcccagtggtgaaagga aactctatttttgctttaactggccttgcagttgctgtagccaaatatgaaagcagcctt tcttcagacactgaaggggtgcctgagaccgaacctgattttattcctatgaaacactgg attcccatggtcacagagaccctcttgagtattgtcaatagccgctaccaacctaaaggt caagtcttcccatggttctatcagaaatcctattcaggtgaaaatactgctagtattata gctcgatcctgtgcggccacagcgttgtctctcctggtgccgattttcattgtgtcatac aaggagaagattgaggaggtcctgagtatgctgactgacaggttacctgggaaaccaaat gctgatgagtctcaagctgttcaaatccacatgggtcttggtttggggatgttcatctca cgtttgtatgaagaaaaagtcagtgatatacctggtcagcagatgaacttagttctcatg aagtctgtggatgtgttggaggactgctgctttgacaccagcctggagtacaacactgga tgtattttaggagtaggacttgttctttcatttatgagtcacagtagccaaacagaatcg cgagtgcatgtttctgcttcattgcgaaaactctgcaaatacctggacaccagtgagtac caaagcagaggaatccaggaggtgcttgcctattctgtggcctgttccagtgtctctgct ttcagtgttggaattatagaagcagctgaggctgagaaggctatgagcaagctacggacc ttagcagaagataatcagcagacctacagttttgctttagctttaggtgcaatagtacat ggattgtcagcttgtggtcatgggaaagctgaagacctgagtaacagactaatgccagcc tggataaaaactgtgcttgcagagggttttccaacaatggagcgtctggctgctgtcagt gggctagttgcactggtaggctctgaaggaggcatgatacagctgaaatctgagaccatt cagtcctcacagtttcaaagtaagctaaatgaagtgatcagaacccttacacagataatt agtctctcagagcagattggtcttcagacaaatgcagtaagacttctgggacgtcttcac atgtcctgtttgtcttctacacagaacagggcatctgttcctccagattttagctactta cctgtaaacagctttatcagggcagccattgactttgccattgaaagtggaaagaaaggc cctgaatctgtcccagctgagctggtgaaagtagcactggcacccattgcattagttgga gaaagctatcagtatccacctgtaaactgggcatccattctttctcctttgatgaggctg gactttggtgatgaggtgaaacatctctgccttgaactggctgtgacacaggcccagtca tctcaaaatgcagcaatgcttttagggatgtgggtggcacctccccttatctacagtctc agtatgaaaactctgaaataccttttcatgtccctgtccctgtggatgcaacatgttgca gaagataaactgcagtcttttacagaagtgcttctcatacaacaatttgaagtgaagaac cgcacaaaaaggccagaaatttgccagtgtgttctacaggggctcatccaggcaatgaaa cttcccaaccctgcccagttgtgctggagctttttgtgtcaggctgtggagaaaatatat gagcttcttccaaatgaggttcagagaagtgaactggagatgtatgttgacgtagcaaga tgtatttcagaaatggccgattcagagatcaatcgcattgtccagatctccaagaacaat atagagaaggccacgttcatgaaagtttatttaatttctcaaggcagattgtctctgaca aacttgagtgctgtgattgaaactgtggcaggatatcagcagaaagaaaatattttatgg atgttcttgcatagtttctatcatgctcgcattgtgagacatgaaaatacaggagttctg aaaagaatggactggctgttagacttgatgggctacatcagaaatgcagcatacaggtca acacccttacaaaatgttgatctgaaagagtgcatagatttcctcatgtggctctttgcc gcttctgtgttggcctgggctgaccatggtgcaccattactgcttggcctcagtgctgac tggtcgctgtgtaaaccccacatggtatcagcagaattatctgaggaaaacattggcaag cactccactgacaagttcgctgtgcaagaaactctcactctccttccaaatagcctttcc cttttgctggctaaagaaccatggaaagaacaaacacagaagtttattgactggctgatc aatatgatggaatgtcctaaggaagcattatcaaaatcttccatggacctgctgaaagtt gcacttctggccttgaggtctcttgcagagttcaagaagaaagcagtatggactaaagct tatgggtggtag

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