Cyanistes caeruleus (blue tit): 111941043
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Entry
111941043 CDS
T05602
Symbol
TAF1C
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit C
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111941043 (TAF1C)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
111941043 (TAF1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
TAF1C_C
Adeno_L433K_22K
Motif
Other DBs
NCBI-GeneID:
111941043
NCBI-ProteinID:
XP_023799775
UniProt:
A0A8C0TY67
LinkDB
All DBs
Position
Z
AA seq
933 aa
AA seq
DB search
MEFPAVLFPSYFGVGPPREEGGSAPVAGWGEHGQVLEGGPGRRQVQPAFVPRRGVTGERW
EAADPAAVPVLLPSEDGWIPLPATQDILYSSGLCRKLRAGKSGATLDFAKQLGHFFVDHP
EDAFGSLGHLLHKNFHLGNSKLKRPARSSTIRMTALVEDIDRLEARRGCPRQHLASRLRW
FSHLCRDWLFEVPLGLLADCLHEELMQQWSNLLFDDSLTGGALAWLPPEDGGTPVGRLVH
PGGKAMNHLYFQDVVLEELPRARGSPAQFELSGRIRQVAAARVDGQDFVGVRSDYHCGVW
RVPGKAGAAPTPLQVIHTDVPASCLTVSPHLPGELSVCTQSGTVYLWSVETGLQQLRHDP
QTMFFRDHSSWRWSDFTAHPRVLSCADRTGLQCLDARAPKRCHFDLFKVGEEAGCQQGER
VVLPMYLGRAHPSQYLVTTQFSMYVLDERLPLMPVLKWAHMMKAPPVFAHLMPGKPGRSH
KVLLGASHTQELLLLQYRGGSQSACQLAGTPQKLHSIAGCLQHLPTQLPHRHHMLQQRLT
APAAGLAATLEEDALHKSMLVFQLSEAGDVFCQRLTHKPAQPPAPPSRDEVTTAPGSSPL
FEAPASSPQGLGGEEEEEEEQTFYLSNLEVIIDDEEEDMGTPAPLEEAELQEPCANSQPS
PEVPSPAAALQYRRWLRALSRACREPPQHSWPPSLSQRRLFTRKDLEGPAGPSSLQRQMR
QRLRQTMQEGGRIQRWEPLALQPPPQPQTLEPVDGLDPLSVRLTAAWAGDWEQWWEERTS
FSVAQRQRALRERRRRQKRARGHRSLSASFTSSLTYQSELSELSDTGLPLPSPGRPPILS
QEGSPRASSPPLHSPPASPVPDEALLSSQSLRCRGIPKERRKTLRDYLSVWAEGPPEPPE
PPGSQASQLCIPSSQSQLSSASQPLRKRPRMGF
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggagttcccggccgtgctcttcccctcctacttcggcgtcggcccgccgcgggaagag
ggtggctccgcgccggtcgccggctggggcgagcacgggcaggtgctggagggtggcccc
ggccgccgccaggtgcagccggcgttcgtgccccgccgcggcgtgacgggtgaaaggtgg
gaggccgccgaccctgcggctgtgccggtgctgctgcccagcgaggacggctggatcccc
ttgcccgcgactcaggacattttgtacagcagcggcctgtgcaggaagctccgggcaggc
aagtccggagccactctagacttcgctaagcagctgggacatttctttgtggatcaccca
gaagacgcttttggctccctggggcacctgctgcacaagaacttccacctgggaaactcc
aaactgaagagaccagcccggagtagcaccatccggatgacagccctggtggaggacatc
gaccgcctggaggctcgacgcggctgcccccggcagcacttggcctcccgcctgcgctgg
ttctcccacctctgccgtgactggctcttcgaggtgccactggggctgctggcagactgc
ctgcacgaggagctgatgcagcagtggtccaacttgctctttgacgacagtctcactggg
ggggcactggcctggttgccccctgaagacggggggacacccgtgggccgcctggtgcac
cctggagggaaggccatgaaccacctctatttccaggatgtggtgctggaagagctgccc
cgtgcccggggctccccagcacagtttgagctcagtgggcgcatccggcaagtggctgca
gcccgtgtggatggacaagattttgttggcgtccgttcagactatcactgtggtgtttgg
agggtgccgggcaaggcaggggcagctcccaccccactacaggtgatccacactgatgtg
cctgcctcctgcctcactgtcagccctcaccttcccggggagctgtctgtctgcacgcag
agcgggaccgtctacctctggagcgttgagaccgggctgcagcagctccgccatgacccc
cagaccatgttttttcgggaccattcatcctggcgctggagtgacttcactgcccaccca
cgggtgctcagctgtgctgaccgcacgggcctgcagtgcctagatgcccgggcccccaag
agatgccacttcgacttgttcaaggtgggcgaggaagctggctgccagcagggtgaacgt
gtggtgctgcccatgtacctgggcagggctcacccctcacagtaccttgtcaccacccag
ttctccatgtatgtgctggacgagcggttgccactgatgcctgttctgaagtgggcacac
atgatgaaggcccctccggtctttgcacacctgatgccaggcaaacccgggaggagccac
aaggtgctgcttggagcatcccacacccaggaactgttgctgttgcaataccgggggggc
agccagtcagcttgtcagctggctgggactccacagaagctgcacagtattgcagggtgc
ctgcagcatctgcccacccagctccctcaccgtcaccacatgctccagcagcgcctcaca
gccccagcagcagggctggctgccacgctggaggaggatgcactgcacaagtccatgttg
gttttccagctctctgaggctggggatgtcttctgccagaggctgacccacaagccagca
cagccccctgcacccccatcaagggatgaggtcacaacagcccctggctcttcccctctc
tttgaggctccagccagcagcccacaaggcttgggcggtgaggaagaagaggaggaagag
caaacattctacttgtccaacctggaggtgattatcgatgatgaggaagaggacatgggc
acaccagcacccctggaggaagctgaactgcaggagccctgtgcgaactcccagccctcc
ccagaggtacccagcccagctgcagccctgcagtaccgacgctggctgagggcactttcc
agggcctgcagggagcccccccagcacagctggccccccagcctcagccagaggcgcctc
ttcacccgcaaagatctggaggggccagcaggccccagcagcctgcagagacagatgcgc
cagcggctgcggcaaaccatgcaggaaggtggccgcatccagcgctgggagcctttggcc
ctccagccccctccccagccacagaccctggagcctgtagatggtctggaccccctaagt
gtccgtctgacagcagcttgggctggggactgggagcagtggtgggaggagaggacaagc
ttcagtgtggcacagaggcagcgggctctgcgggagcggcggcggcggcagaagcgagcc
cggggccaccgcagcctttcagccagcttcacctcctccctcacctaccagtctgagctg
tctgagctgagtgatacgggcctcccactgccctcccctggccgcccacccattctctcc
caggagggctccccacgagccagcagccccccacttcacagccccccagcctcaccagtg
cccgatgaagccctgctgtcttcacagagcctgcgttgccgtggcatccctaaggagcgg
cggaaaacactgcgggactacctgtccgtgtgggcagaggggccccccgagccaccagag
ccccctggtagccaggccagccagctgtgcatcccttcttcgcaaagccagctgtcctcc
gcctcacagcccctccgcaagcgcccacgaatgggcttctga
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