Cyanistes caeruleus (blue tit): 111941089
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Entry
111941089 CDS
T05602
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae04137
Mitophagy - animal
ccae04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111941089 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
111941089 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111941089 (VCP)
03009 Ribosome biogenesis [BR:
ccae03009
]
111941089 (VCP)
04131 Membrane trafficking [BR:
ccae04131
]
111941089 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccae04147
]
111941089 (VCP)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
111941089 (VCP)
Ribosome biogenesis [BR:
ccae03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
111941089 (VCP)
Membrane trafficking [BR:
ccae04131
]
SNARE
SNARE associated proteins
Others
111941089 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111941089 (VCP)
Exosome [BR:
ccae04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
111941089 (VCP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
AAA_7
ATPase
AAA_18
DUF815
ABC_tran
IstB_IS21
nSTAND_NTPase5
NB-ARC
TsaE
AAA_24
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
111941089
NCBI-ProteinID:
XP_023799862
UniProt:
A0A8C0TY46
LinkDB
All DBs
Position
Z
AA seq
761 aa
AA seq
DB search
MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPC
PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG
HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR
ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA
RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI
PLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIES
EIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS
RGFGSFRFPSGNQGGAGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatgaactgcagctgttcagaggagacactgtcctgctcaaaggaaagaagaggaga
gaagcagtctgcattgttctgtcagatgatacctgctcagatgagaagattcgcatgaat
agagttgttcgcaacaacctgagagtgcgcctgggtgatgtgatcagcatccagccttgc
ccagatgtgaaatatggcaaacgtatccacgtgctgccaattgatgacacagtagaaggg
atcacagggaatctgtttgaggtctatctcaagccctacttcttggaagcttacagacct
atcaggaaaggtgacatcttcttggtgcgtggagggatgcgtgcagtggagttcaaagtg
gtggagacagatccaagcccgtactgcatagtggctccggacacagtgatccattgtgag
ggagagcccatcaaacgggaggatgaagaggagtcactgaatgaagtgggctatgatgac
attggtggctgccggaagcagctggctcaaatcaaagagatggtggaacttcccctcaga
caccctgctctcttcaaggccataggggtgaagcctccacgtgggatccttctgtatggt
cctcctggcactggtaaaacactgattgcccgagcggtggcaaatgaaacgggggctttc
ttcttcctgatcaacggtcctgagatcatgagcaagctggctggtgagtctgagagtaac
ctgaggaaagcctttgaagaagcagagaagaatgctcctgccatcatcttcattgatgaa
ctggatgccattgctcctaagagagagaagacacacggggaggtggagcgtcgcatcgtg
tctcagctcctgaccctcatggatgggctgaagcagagggcacatgtgattgtgatggca
gccaccaacagacccaacagcatcgacccagcactccggcgattcggtcgttttgacaga
gaggtagatattggtatccctgatgccaccgggcgcctggagatcctccagatccacaca
aaaaatatgaaactggctgatgatgtggatctggaacaggtggcaaacgagacccatggc
catgttggtgctgacttggctgctctttgctcagaagctgctcttcaggctatcagaaag
aagatggatctcatagacctagaagatgaaaccatcgatgctgaagtgatgaactctctg
gctgtgaccatggatgacttcaggtgggctctgagccagagcaacccttctgctcttcgg
gagactgtggtagaggtgccacaagttacctgggaagatattggtggcctagaagatgtg
aagagagaactccaggagcttgtacagtatcctgtggagcacccagacaagttcctcaaa
tttggcatgaccccatcaaaaggagttctgttctatgggccacctggctgtggcaagaca
ctgctggccaaagccattgccaacgaatgccaggcaaattttatttccatcaaggggccg
gaattgctcaccatgtggtttggtgagtctgaagccaacgtgcgtgagatctttgacaag
gctcgccaagcagccccgtgtgtgctgttctttgatgagctggactccatcgccaaggcc
cgaggtgggaatatcggtgatggtggtggtgctgcagaccgtgtcatcaaccagatcctg
accgagatggatggcatgtccaccaagaaaaatgtcttcatcattggtgccaccaacagg
ccagacatcattgacccagccatcctgcgccccggccgcctggatcagctcatctacatc
cctctgcctgacgagaagtcacgggttgcaatccttaaggccaatctgaggaaatcacca
gttgccaaggatgttgacctggatttcctggctaagatgaccaacggcttctcaggggct
gacctgacagaaatttgccagcgtgcctgcaaactggccatccgtgaatccatcgagagt
gagatcaggcgagagcgtgagaggcagaccaacccttctgccatggaggtggaggaggac
gacccggttcccgagatccgcagggatcactttgaggaggccatgcgctttgctcgccgc
tctgtcagtgacaatgacatcaggaaatacgagatgtttgcacagaccctacagcagagc
cgtggctttggcagcttcaggttcccatcaggcaaccagggcggcgccggtccgagccaa
ggcacaggaggtggcagcgggggcaacgtgtacagcgaagacaatgacgacgatctctac
ggttaa
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integrated database retrieval system
