KEGG   Cyanistes caeruleus (blue tit): 111941100
Entry
111941100         CDS       T05602                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
ccae  Cyanistes caeruleus (blue tit)
Pathway
ccae04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:ccae00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    111941100 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccae04131]
    111941100 (WDR7)
Membrane trafficking [BR:ccae04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    111941100 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WD40_Gbeta WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML CFAP251_N ASA1 EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_ACSF4 Beta-prop_DCAF12 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_SCAP NBCH_WD40 PAC11 WDR72_alpha-sol WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_WDR11_2nd PD40 Tricorn_2nd TRM82_WD Beta-prop_TEP1_C Beta-prop_DCAF4 LRS4 zf-MYND
Other DBs
NCBI-GeneID: 111941100
NCBI-ProteinID: XP_023799886
LinkDB
Position
Z
AA seq 1464 aa
MAGNSLVLPIVLWGRRAPTHCVSSLLLVDGSVIVTGCHDGQICLWDLAPDLQINPRALLF
GHTASVTCLSKASASSEKQYIVSASESGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFTV
GSQREGRLLCHGHYPEILVVDATSLEVLYSLISKISPDWISSMTIIRSNRTQEDTVVAVS
VTGILKVWIVTSELSRAQDTSPVFEEESKPIYCENCQSISFCSFTQRSLLVVCSKYWRVF
DAGDYSLLCSVPSENGQTWTGGDFVAADKVIVWTEDGQSFIYKLPASCLPASDSFRRDVG
KAVESPIPPLLYSVLDRAQKQLLICPPVTRFFRGHTQLESRLLIQGDSSGRLCIWSVPDT
PEQQQEGAKGLLAATSVSLQEAFDRLCPRPAGIIDQLSAVPHEPLRVTASVYMPAHGRLA
CGREDGSIVIVPATQTAIVQLLQGEHTLRRGWPPHRTLRGHRNKVTCLLYPHQVSSRYDQ
RFLISGGVDFSVIVWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCVCSVASDHSV
GLLSLREKKCIMLASRHLFPIQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGIT
AVEILSACDEAVPAALDALSHPAVNLKQAMTRRSLAALKNVAHQKLQTLATNLLASEASD
KGNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPSAALLAPESLQK
SSGGSDKGGSFLAGKRAAVLFQQVKETIKENIKEHLLDDEDEDEEATRQRREDGDPEYRS
SKSKPLTLLEYNLTMDTAKLFMSCLHAWGLNSVLDELCLDRLGMLKPHCSVSFGLLSRGG
HMSLMLPGYNQPAGGVTEGLGRGTYGVSRAVTTQHLLSVISLANTLMSMTNATFIGEHMK
KGPARPPRPGTPEMGKGKPPTAGHAAQGQIKQAAAPGADSGPADSSAFHPCFLVNEGWSQ
LAAMHCVMLPELLGLERFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRMEQAGRKET
IDTWAPYLPQYMDSLISPGVTTESLQAPSGSADPSGAEAKAQEEEPELADDDMAAGCLAG
LAQPKKASTSYEERRKQATAIVLLGVIGAEFGAEIQPPKLPTRPRSSGQAPEGFGLTSAG
SNYSLARHTCKALTFLLLQPGSARLPAHSTVRRTAIDLIGRGFTVWEPFMDVSAVLMGLL
ELCADADKQLANVTAGLPLSPAADSARSARHALALIATARPPAFITTIAKEVHRHTALAA
NTQSQQNVHTSTLARAKGEILRVIEILIDKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGL
QECFPAICRFYMVSYYERSHRVAVGARHGSVALYDIRTGKCQTIHGHKGAVTAVAFAPDG
RYLATYSNSDSHLCFWQMNTSLLGSIGMLNSAPQLRCVKTFQVPPVQPASPGSLGALRLA
RLIWTSNRNVILMAHDGKEHRFMV
NT seq 4395 nt   +upstreamnt  +downstreamnt
atggccgggaacagcctggtgctgcccatcgtgctgtggggccggcgcgcccccacgcac
tgcgtctcctccctgctgctcgtggatggctccgtcatcgtcaccggctgccacgacggg
cagatctgcctctgggacctggctcctgacctgcagatcaatcccagagctctgctcttt
ggccacacagcctcagttacttgtttgtccaaggcctcagcatccagtgaaaagcaatat
atagtgagtgcatcagagagtggggagatgtgcctgtgggacgtgaacgacggcaggtgc
atcgagttcaccaagctggcctgcgctcacacgggcatccagttctatcagttcacagtc
ggctcgcagcgggaagggaggctcctgtgccacggacattatcctgaaatcctggtggtg
gatgcaaccagcctggaagttctttattccttgatatccaagatttctcctgactggatc
agctccatgaccatcatccgctccaacaggacacaagaggacaccgtggtggccgtgtcc
gtgaccggcatcctcaaggtgtggatcgtcacctcggagctcagtcgggcacaggacacc
agcccggtgttcgaggaggaatccaaacccatctactgcgagaactgccagagcatttcc
ttctgctccttcacgcagcgctcgctcctggtcgtgtgctccaagtactggagggttttt
gatgctggagattattcgctgttgtgctcggtgcccagtgaaaatgggcagacctggact
ggtggggactttgtggcagctgataaagtgattgtgtggacagaggatggacagagtttc
atctataaattaccagccagctgcctgccagccagcgattccttccgcagggatgtgggg
aaggccgtggagagccccatcccacctttgttgtacagcgtgttggacagagcgcagaag
cagctcctgatctgtcctcctgtgactcgcttcttccgtggccacacgcagcttgaatcc
aggctcttaatccagggggattcctcggggagactctgcatctggagcgtgcccgacacc
cctgagcagcagcaggagggtgcaaaagggctgctggcagccacctcggtgtccctgcag
gaagcgtttgaccggctttgcccccgtcccgcggggatcatcgaccagctgagcgcggtt
cctcacgagcccctgcgcgtcaccgccagcgtctacatgccggcgcacgggcggctggcg
tgcggccgcgaggacggcagcatcgtcatcgtgcccgccacgcagaccgccatcgtgcag
ctgctgcagggggagcacaccctgcgcagaggctggccccctcacaggacgctgcgaggc
caccggaacaaggtcacctgtttgctgtaccctcaccaggtgtcctcccgctacgaccag
aggttcctgatctcgggcggcgtggatttctccgtcatcgtctgggatatcttctccgga
gagatgaaacacatcttctgtgtgcacggaggggaaatcacccagctgctggtcccacca
gaaaactgcagtgcgagggtgcagcactgcgtgtgctcggtggccagcgatcactcggtg
gggctgctgagcctgagggagaagaaatgcatcatgctggcctcgcgccacctcttcccc
atccaggtgatcaagtggaggccgtccgacgattacctggtggtggggtgttccgacggc
tccgtctacgtctggcagatggacacgggggctctggatcgctgcgtgatgggaatcaca
gccgtggagatcctgagcgcctgtgacgaggccgtgcccgccgcgctggacgcgctcagt
caccccgccgtcaacctgaagcaggccatgacgcgccgcagcctggccgccctcaagaac
gtggcccaccagaagctgcagaccctggccaccaacctgctggcctcggaggcctccgac
aaggggaatttacccaaatactcccacaactccctgatggttcaggccatcaagacaaac
ctgacagaccccgacatccacgtgctgtttttcgacgtggaggctctgattatccagctg
ctgacggaggaggcgtcgcggcccagcgccgcgctgctcgcccccgagagcctgcagaaa
tcctcgggcggctccgacaagggcggctccttcctcgccggcaagagagcggccgtgctc
ttccagcaggtgaaggaaaccatcaaggagaacatcaaggagcacctcctggacgatgag
gacgaggatgaagaggccacgaggcagaggagagaggacggcgatccggaatatcgctcc
agcaaatccaagccgctgactttgctggagtataacctgaccatggacacggccaagctc
ttcatgtcctgcctgcacgcctggggcctcaactccgtgctggacgagctgtgcctggat
cgcctgggcatgctgaagccgcactgctccgtgtccttcggcctcctgtcgcggggaggc
cacatgtccctgatgctgcccggctacaaccagcctgcaggcggggtgacggagggcttg
ggaaggggcacgtacggagtgtcgcgggccgtcaccacgcagcacctgctgtccgtcatc
tcgctggccaacacgctgatgagcatgaccaacgccaccttcatcggggagcacatgaag
aaaggccctgccaggccgcccaggccgggcacccccgagatgggcaaggggaagcctccg
accgccggccacgctgcgcaaggacagatcaaacaagccgctgctcccggcgcggattcc
ggccccgccgacagctccgctttccatccctgtttcttggtcaacgaaggctggagccag
ctggctgccatgcactgtgtgatgctcccggagctgctggggctggagcggttccggccg
ccgctgctggagatgctggcccggcgctggcaggatcgctgcctggaggtgcgggaggcg
gcgcaggcgctgctgctggccgagctgcgcaggatggagcaggccggccggaaggaaacc
atcgacacctgggctccgtacctgccccagtacatggacagcctcatctcccctggagtg
accacggaatccctgcaggctccgtccggcagtgcggatccgtcgggagccgaggccaag
gcgcaggaggaggagccggagctggctgacgatgacatggcagcaggctgcctggcgggg
ctggcccagcccaagaaggcgtcgacgtcgtacgaggagcggcgcaagcaggcgacggcc
atcgtcctgctcggcgtcatcggggccgagttcggcgccgagatccaacccccgaagctg
ccgacgcggccccgcagctccggccaggcccccgagggcttcggcctcaccagcgccggc
tccaactactccctggccagacacacctgcaaggcgctgacattcctgctgctgcagccg
ggcagcgcgcggctcccggcgcacagcaccgtgcgcagaaccgccatcgacctcatcggc
cgcggcttcaccgtctgggagcccttcatggacgtgtcggccgtgctgatggggctgctg
gagctctgcgccgacgccgacaaacagctcgccaatgtcaccgcggggctgcccctgagc
ccggccgccgactctgcgcgctccgctcgccacgcgctggcgctcatcgccaccgcccgc
ccgcccgccttcatcaccaccatcgccaaggaggtgcacaggcacacggcgctggcggcc
aacacgcagtcgcagcagaacgtgcacaccagcacgctggcgcgcgccaagggcgagatc
ctgcgcgtcatcgagatcctcatcgacaagatgcccacggacgtggtggatctgctggtg
gaggtgatggacatcatcatgtactgcctggagggatccctggtgaagaaaaaggggctg
caggaatgtttcccagccatctgcaggttctacatggtgagctactacgagcgcagccac
cgcgtggccgtgggcgctcgccacggctccgtggcgctctacgacatccgcaccggcaag
tgccagactatccacggccacaaaggagccgtcaccgccgtggccttcgcccccgacggc
cgctacctcgccacctactccaactcggacagccacctgtgcttctggcagatgaacacg
tctctgctgggcagcatcggcatgctgaactcggccccgcagctgcgctgtgtcaagacg
ttccaggtgcccccggtgcagccggcgtcgcccggctcgctcggcgcgctgcgcctggcc
cggctcatctggacctccaaccgcaacgtcatcctcatggcccacgacggcaaggagcat
cgcttcatggtctag

DBGET integrated database retrieval system