Cyanistes caeruleus (blue tit): 111941273
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Entry
111941273 CDS
T05602
Symbol
GTF2H2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03022
Basal transcription factors
ccae03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111941273 (GTF2H2)
09124 Replication and repair
03420 Nucleotide excision repair
111941273 (GTF2H2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111941273 (GTF2H2)
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111941273 (GTF2H2)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111941273 (GTF2H2)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111941273 (GTF2H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
IBR
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
111941273
NCBI-ProteinID:
XP_023800136
LinkDB
All DBs
Position
Z
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNSKKHVTALKKAVDMSCSGEPSLYNSLNLAMQTLKHMPGHTSREVLVVLSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDEGHYKELLMHHVSPPP
ASSTSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEQYKGERYCQGCQGEIKDQNVYIC
KVCQNAFCVECDLFVHDSLHCCPGCIHEHPAPVSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacccgagcggaccaagcgctgggaaggaggctacgaaagaacatgggaa
attcttaaggaagacgaatccgggtcgttgaaagcaaccatcgaggacattctcttcaaa
gcaaagaggaaaagactctatgaacaccatggacaagtccggcttggaatgatgcgtcac
ctttatgtggttgttgatggatcaagaacaatggaggaccaagacttaaaaccgaacaga
cttacttgcactctgaagttactggaatattttgttgaggagtactttgaccagaatcct
attagtcagattggattaattgtaaccaagagtaaaagagcggaaaaaatgacagaactc
tcaggaaactcaaaaaagcatgtaactgctctgaagaaagcagtggatatgagctgcagt
ggagagccttctctgtataattccctaaatttggccatgcagactttaaagcacatgcca
ggacatacaagccgagaggttttggtagtcctcagcagtctgacgacatgtgatcctgcc
aacatctatgatctaattaagtgtttaaaagcagtaaagatcagagtgtctgtcatcggc
ttaagtgctgaagttcgagtttgtacagtacttgcccgagaaactggtggaacttaccac
gttattttagatgaaggtcattataaggagctgctgatgcaccatgttagtcctccacct
gccagttcaacttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctatctgatcaagatgcaaagccctcctttagcatggcgcaattggaaaataacagt
gacccaggtcttacactgggtggatatttttgtcctcagtgcagagccaaatactgtgag
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctctagatgcctttcaggaagttccactggaacaatacaag
ggggaacggtattgtcaaggctgccagggagaaataaaagatcaaaatgtgtacatatgc
aaagtgtgtcagaatgcattttgtgtggaatgtgatctgtttgttcatgattcactgcac
tgctgtcctggctgtattcatgagcaccctgctcctgtatctgtatga
DBGET
integrated database retrieval system
