Cyanistes caeruleus (blue tit): 111941615
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Entry
111941615 CDS
T05602
Symbol
XRCC4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
111941615 (XRCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccae03400
]
111941615 (XRCC4)
DNA repair and recombination proteins [BR:
ccae03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
111941615 (XRCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
XLF
DUF2169
Leu_zip
DUF5382_N
GCK
ALMT
Motif
Other DBs
NCBI-GeneID:
111941615
NCBI-ProteinID:
XP_023800524
LinkDB
All DBs
Position
Z
AA seq
379 aa
AA seq
DB search
MFFRGYVRAREPQMKKQHSSLSKWNHPELRVRFSRTQNHYLILQGIEKMEKTLNRIHPVS
DPEATYFLQVSWEKDLGTGFGLLLSDCRCAWTGTVFEADISREAADIEMDREKYVEELRK
ALIAGEESAGRYNFVISRDEQNKACHFSYERNLKDGSFRLGSLKLQEVPSPAEVVKELLV
YCLDRLGKLQAKTEHLQRENEKLLSNCSDAEKRLEKCVEAKEELEADLYSKFVLVLNEKK
AKIRSLQKLLSEAKESAVDAKCARDSVATAQMVIKRESNYDASTDEESENPARASLPSAL
ERRDSSLLGSPDIVDPAPRRKRRQRTAKPAGTGAKVAAYEAEQEKAGPASQATSGQRCPE
WDLETLENSCQPEDLLEDM
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcaggggttatgttagagctcgggagccccagatgaaaaagcagcactcgtcc
ttgagtaagtggaatcacccagagctgagggtgagattttcaaggactcaaaaccattat
ctgattcttcaaggtattgagaagatggagaagactttgaacagaattcatccagtttct
gatccagaagcaacctattttctacaggtgtcatgggagaaggatttaggcactggcttt
ggtttacttcttagtgattgtcggtgtgcctggactgggacagtgtttgaagcagacatt
tctagggaggctgctgacatagaaatggacagagaaaaatatgtggaagagctgaggaaa
gcactgatagctggagaagagtcagctggcagatacaactttgtgatttcaagagatgag
cagaacaaggcctgtcacttctcctatgaaaggaacctgaaagatggctctttcagactt
ggatctctgaagctgcaggaagtcccaagcccagcagaggtggtcaaggaactccttgtt
tactgcctggacaggctgggaaagctgcaggccaaaactgagcatctgcagagagaaaat
gaaaagctgctcagcaactgtagcgatgcggagaagaggctggaaaaatgcgtggaagct
aaagaggagctggaggcagacctttatagcaagtttgttttggtgctgaatgaaaagaag
gcaaagataagaagcttgcagaagttgttgagtgaagctaaagaatctgcagtggatgcc
aaatgcgcaagggatagtgtagctactgctcagatggttataaagagggaaagcaactat
gatgccagcactgatgaggaaagtgaaaatccagcacgggcctcgttgccatcagctctg
gaacgaagggattcctccctcctgggcagcccagacatcgtggacccagctccgaggaga
aaacgaaggcagaggacggcaaaacctgcagggacaggagctaaagtggctgcttacgag
gcagagcaggaaaaggctggcccggcctcgcaggcgacgtcggggcagcgctgcccggag
tgggatctggaaaccctggaaaactcctgtcagccagaggacctcttggaggacatgtag
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integrated database retrieval system
