Cyanistes caeruleus (blue tit): 111941645
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Entry
111941645 CDS
T05602
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111941645 (CHD1)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111941645 (CHD1)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111941645 (CHD1)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
111941645 (CHD1)
SLIK complex
111941645 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD1_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DUF7855_C
Motif
Other DBs
NCBI-GeneID:
111941645
NCBI-ProteinID:
XP_023800575
LinkDB
All DBs
Position
Z
AA seq
1722 aa
AA seq
DB search
MNGHSDEESVRNSSGESSRSDDDSGSASASGSGSSSGSSSDGSSSQSGSSDSDSGSESVT
QSESESDTSREKKQIQSKPPKVDGSEFWKSSPSILAVQRSAVLKKQQQQQKAASSDSVSE
EDSSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDREKSSCEESESDY
EPKNKVRSRKPPTRIKPKSGKKSAGPKKRQLDSSEDDDEEEDDDDYDKRGSRRQATVNIS
YKEAEETKTDSDDLLEVCGEDVPQPEEDEFETIEKFMDSRIGRKGATGAATTIYAVEADG
DPNAGFEKSKEPAEVQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKR
WLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSEC
SWEDGALIAKKFQARIDEYFSRNQSRTTPFKDCKVLKQRPRFVALKKQPSYIGGPENLEL
RDYQLNGLNWLAHSWCRGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLST
LTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKS
FLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIM
PEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSAL
QKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQ
HLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGE
LRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRI
GQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFN
KEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKV
ANFSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQIS
FNGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKF
GGPLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGQERAGGRLGKVKGPT
FRISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNL
LIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKE
AQRLAGAGNSKRRKIRTKKNKVLKAAKLKEEIKSDSSPQPSEKSDEDDDENNKINEIKSE
NKEKTKKIPILDTPVHITASSEPVPISEESEELDQKTFSVCKERMRPVKAALKQLDRPEK
GLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKL
YKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVERLKENTNHDDSSRDSYSSDRHLSQYH
DHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWDHYKQESRYYSDSKHRKLDDYRSRDH
RSSLEGSLKDSRVHSDHRSHSDHRIHSDHRSSSEYSHHKSPRDYRYHSDWQMDHRASGSG
PRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaaagtgtaagaaacagtagtggagagtcaagccgatca
gatgatgattctgggtcagcatcagcttctggatctggttcaagctctggaagtagtagt
gatggaagcagcagccagtcaggcagcagtgactctgactctggttcagagtcagtcact
caatcagaatcagagtctgacacatctagagagaaaaaacaaattcagtctaaaccacca
aaagttgatggatctgagttttggaagtctagtccaagtatacttgctgtgcaaagatca
gcagtgctcaagaagcagcaacaacaacaaaaggcagcctcatcagacagtgtctcagaa
gaggactcctcaagtagtgaagattcagcagatgactcatccagtgaaaccaagaagaaa
aaacataaagatgaagactggcaaatgtcaggatcagggtcagtatcgggaactggttca
gattctgaatcggaggaagacagggagaaaagcagctgtgaagaaagtgaatctgactat
gagccaaaaaacaaggtcagaagccggaaacctccaaccagaattaagccaaaaagtggg
aaaaagagtgctggaccaaaaaagaggcaacttgattcatcagaggatgatgatgaggag
gaggatgatgatgattatgataagaggggatctcgtcgccaggcaacagtcaacattagt
tacaaagaagctgaagaaaccaagacagattctgatgatttgctagaagtttgtggagaa
gatgttccacaacccgaagaagatgaatttgaaactatagagaaatttatggatagtcga
attggccgtaaaggagccacaggtgctgcaaccacaatatatgcagttgaggcagatggt
gacccaaatgccgggtttgaaaaatcaaaggagccggcagaagtacagtatcttattaaa
tggaaaggttggtcacacatccataacacttgggagacggaggaaacactgaagcaacaa
aatgttaaaggaatgaagaagcttgacaattacaagaaaaaggatcaggaaacaaaacga
tggctgaaaaacgcttctccagaagatgtggaatattacaactgccagcaggagcttaca
gatgatctacataaacaataccagatagtggaaagaataattgctcattcaaatcagaaa
tcagctgctggttatccagactactattgtaagtggcagggtctgccttactctgaatgc
agctgggaagatggagctctcattgccaaaaagtttcaggcacgcattgatgagtacttc
agcagaaatcaatccaggaccactccctttaaagattgcaaggttctaaagcaaaggcca
cggtttgttgcactgaaaaagcaaccatcttacattggaggacctgaaaatttagagtta
agagattatcagttaaatgggttgaattggcttgctcactcatggtgcagagggaatagc
tgtattctcgcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaac
tatctgtttcacgagcatcaattgtatgggcctttcttgttggttgtaccactttctacc
ttgacatcttggcaaagagagattcaaacctgggctcctcagatgaatgctgtagtttac
ttaggagacataactagtagaaatatgataagaactcatgaatggatgcatccgcagacc
aaacgattgaaatttaacatactcttaacaacatatgaaattttgctaaaggataagtca
ttccttggtggtctgaattgggcattcataggagttgatgaagctcatcgtttaaaaaat
gacgactctctcctgtacaaaactttaattgactttaagtctaaccatcgtcttcttatt
actggaacccctctgcaaaactctctcaaagagctttggtctttactgcacttcattatg
ccagaaaagttttcctcatgggaagattttgaagaggagcatggcaaagggagagagtat
ggttatgcaagtcttcacaaagaacttgaaccatttctgctgagaagagttaaaaaagat
gtagaaaagtctctacctgctaaagttgagcaaattctgaggatggaaatgagtgcgttg
cagaagcaatactacaagtggattttaaccaggaattacaaagcccttagcaaaggttca
aaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgcaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttaatacgtagcagcgggaaactaattcttcttgacaagctactgattcgtctgcga
gaacgtggcaacagagtcctgattttctcacagatggtaaggatgctggacatcctggca
gaatatctgaaatatcgtcagttcccatttcagagacttgatggatcaataaaaggggaa
ttgaggaaacaagcactggatcattttaatgcagagggatcagaggacttctgcttttta
ctgtctaccagagctggaggattaggtatcaacctggcatctgctgatactgtggttata
tttgattctgactggaatccacagaacgatctgcaagcacaggctagagcacatagaatt
ggacagaagaaacaggttaatatttatcgactagtcacaaaaggatcggtagaagaagat
attcttgaacgagccaagaaaaagatggtgttagatcatttagtaattcagagaatggac
actacagggaaaactgtcttgcatacaggctctactccttcaagctcaacaccttttaat
aaggaggagttgtcagcaattttgaagtttggtgctgaggagctttttaaagaacctgaa
ggagaagaacaggagcctcaagaaatggatatagatgaaatattgaagagggctgaaact
cgggaaaatgagccaggtccattaactgtaggagatgagttgctttcacagttcaaggtg
gccaacttctccaatatggatgaagatgatattgagttggaaccagaaagaaattcaaga
aattgggaagaaatcattccagaggtccagaggcgaagaatagaagaggaggaaagacaa
aaagaacttgaagaaatatacatgcttccaaggatgagaaactgtgcaaaacagattagc
ttcaatggcagcgaagggaggcggagtaggagtagaagatactctggatctgatagtgac
tccatctcagaaagaaaaaggccgaagaaacgtggaagacctcgaactattcctcgagaa
aatattaaaggatttagtgatgcagagatcaggcggtttatcaagagttacaagaaattt
ggtggccctcttgaaaggttggatgctgtagctagagatgctgagctagttgataaatca
gagacagatctcagacgtttgggagagcttgtacataatggatgcattaaagccttaaag
gataattcatctggacaagagcgagcaggaggtagacttgggaaggttaaaggcccaaca
ttccgaatctcaggagtgcaagtaaatgcaaagttagtcatctctcatgaggaagaattg
gcaccattgcacaaatccattccttcagatccagaagaaagaaaaagatatgtcatccca
tgccacactaaggctgcccattttgatatagattggggtaaggaagatgattccaatttg
ttaataggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcctgat
ctcagtttgacacagaagattttgcctgatgatccagataagaaaccccaggcaaagcag
ttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaaggaaggaa
gcacaaaggcttgctggagcaggcaattcaaagaggcggaaaataagaactaagaagaat
aaggtgctaaaggctgcaaaattaaaagaagaaataaaaagtgattcttcaccccaaccc
tcagaaaaatctgatgaagatgatgatgagaataacaagataaatgaaatcaaatcagaa
aataaggaaaaaactaaaaaaataccaattctggatactccagttcatattactgcgtct
agtgaaccagttcctatatcagaagaatctgaagaactagatcagaaaacttttagtgtg
tgcaaagaaagaatgagacctgttaaggcagcattgaaacagctggatcgaccagagaag
ggcctttctgaaagagaacagctggaacatactagacagtgtcttattaaaattggggat
catattactgaatgtctaaaggagtacacaaatcctgaacaaattaaacaatggagaaaa
aatttgtggatttttgtctctaagtttacagaatttgatgccagaaagctgcacaaacta
tataaacatgcaatcaaaaaacgtcaagagtctcagcaacacaacgatcagaatattagc
agcaatgtgaatacacatgtaattagaaatccagatgtggaaagactgaaggagaataca
aaccatgatgacagtagcagggacagctactcctctgatagacatttgtcacaataccac
gatcaccataaggacaggcatcagggagatgcttacaagaaaagtgactccaggaaaagg
ccctattcagcctttagcaatggaaaagatcacagagactgggatcattacaaacaagag
agcagatactacagtgacagtaaacataggaaattggacgactacaggagcagagaccac
aggtcaagcctggaagggagtctaaaagacagccgggttcattcagatcaccgttcccat
tcagaccacaggatacattcagatcaccgttcctcttctgagtacagccatcataaatct
cccagagattatagataccactcagactggcaaatggaccacagagcttcaggtagtggc
ccaaggtcaccactggatcagaggtctccttacggttcaagatctcccctaggtcacaga
tctccatttgaacattcatcagatcacaaaagtacacctgaacatacatggagtagccgg
aaaacataa
DBGET
integrated database retrieval system
