Cyanistes caeruleus (blue tit): 111941779
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Entry
111941779 CDS
T05602
Name
(RefSeq) ATP-binding cassette sub-family A member 1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae02010
ABC transporters
ccae04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
111941779
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
111941779
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccae02000
]
111941779
Transporters [BR:
ccae02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
111941779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
111941779
NCBI-ProteinID:
XP_023800746
LinkDB
All DBs
Position
Z
AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGKLRKLGNSSGLDLKLRDFLTDNETFSDFLHHNVSMPSSAVEELLDAGVNL
QQVLVSGYRMRLRNLCNSSTSSEFLTIQNQTAAKDSEAFICTLSKEKLHAAEQAFRANLN
PLKPLQRHLSFNSSLWDLSETVEVLRESFGKLVKELLSMKSWSDMRQEVMFLTNVNASNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLKGKALWDPHLPASNWTVEDVARFLSNSPEEFETENA
SVYTWVDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
EIAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLTIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRQHRHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWATA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLMLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHSKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacgcagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcagcaggaaccttgccgtggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactcctggggaatcccctggtattgttggaaacttcaatgcctcc
attgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggatacg
agtataaaggatgtccagaaggtcctgggaaaactacgcaaattgggaaattcctctggc
ttagacttgaaacttcgggatttcctgactgacaatgagacattctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcaggggtaaatctc
cagcaggtccttgtgtctggttatcgaatgcgcctgcgaaatctctgcaatagctcaaca
tcgtctgaatttctcacgatccaaaatcagacagcagccaaggactccgaggccttcatt
tgcaccttgtcaaaggaaaaactccatgcagctgagcaagccttccgtgctaacctgaat
cctttgaagcctcttcagagacacctttctttcaattcgtccttgtgggatctgtcagaa
actgtggaagttttgagagagagctttgggaagcttgttaaagagctgctgagtatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaatgcctcaaactcc
tctacgcagatctatcaggctgtgtcacgcatcgtgtgcggccatcctgaaggtggaggg
ctcaaaattaaatccctcaactggtatgaggataacaattacaaagcactgtttggaggg
aacagcactgaagatgatgtgattaacttctatgataactccacaacaccctactgcaat
gagctcatgaagaacctggaatctagcccgctttccaggattatctggagggcgttgaag
cccttgctcattgggaagatcttgtacactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgacctcgggggaatgtgg
gaggagataagcccaaaaatttggacatttatggaaagtagtcaggaaatggatctcatt
cggacgttgctgaaaggcaaagccctctgggacccgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggaatttgagacagaaaatgcc
tctgtgtacacctgggtggatgccttcaatgagacagaccgggctatccaaaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtccggctc
attaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtctttact
gaaatagctcctgacagcacagaccttcctcaacatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgaccccttcgaggacatgcgctatgtctggggaggctttgtctatctgcaggatgtg
gtagagcaagccatcatcagggttcagacaggcacggagaagaagacaggggtttatgtg
cagcagatgccctacccatgttacgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagcccggctgaaggaaacaatgaggattatgggacttgacaacggc
atcctttggttaagctggttcattagcagccttgtccctctcctgatgagtgcaggactg
ctggtgctgatcctgaagatggggaatctgctgccttacagcgatcctagcgtggtgttc
attttcctcacaatcttcggtgttgtgactatcctccagtgctttctcatcagcaccgtg
ttctccagggccaacctggcagctgcctgtgggggcattgtctacttcacactgtacctg
ccttacgtgctgtgtgttgcctggcaggaccacatcagcttctcactcaagatttttgcg
agcctgctgtctccagtagcctttggttttggttgcgagtactttgcactgtttgaggag
cagggagttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcaccacatcagctgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtacattgaatctgtcttcccaggccagtatgggattcccagaccctggtactttcct
ttcacaaagtcctattggtttggggaggaaccacaggacaggcagcaccgccatcctgac
cagaagggatcttcagaagtctgcaaggaagaagagccagtgcatctgagtcttggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctc
acacttaacttctatgaaggacagatcacctcctttctgggacataatggagcggggaaa
accactaccatgtccattttgactggcttgttccccccaacctcaggtacagccttcatc
ctgggcaaagatattcgctctgagcttagcaccatcaggcagaacctgggtgtatgtcca
cagcacaatgtgctgtttgacttgctgactgtggaggaacacatctggttctatgctcgg
ctcaaagggctgccggagaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaggctctctggtggcatgcagaggaag
ctctcagttgccttagcatttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtagatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctccacgcaccacatggatgaggcagacattctgggggaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcttctctcttcctgaagaac
cagctgggaacaggttattatttgaccctggtcaaaaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacggtttcctatctgaaaaaggatgacagtgtctcccag
agcagctctgatgctggccttggcagtgaccatgaaagtgacacactgacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctgttccatgaaattgatgaccgtctttctgatcttgggatttccagctatggcatctct
gaaactactctggaggagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggtacactgccagccagaaggaacagacgtgtgtttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctcagtggcatggatgggaaaggctcctaccagatg
aaaggctggaagctcactcagcagcagttcatggctctgttgtggaagaggatgctcatt
gccaagagaagccggaagggcttttttgcccagattgtgctgccagctgtctttgtgtgt
attgccctcatgttcagcctgattgttcctccttttgggaaatatcccagcctagaatta
cagccctggatgtatgatgagcagtacacttttattagcaacgatgctccagaagatgca
ggcactcacaagcttttggatgcccttcttgataagccgggatttgggacacgctgtatg
cagggacattccatcccagacactccttgcactgtggggcagaaggaatgggccactgct
tcagttccagagtcagtcctggacatcttcctgaaaggcaactggagcatggagaatcct
tccccatcttgtgagtgcagcagtgagaagatcaagaagatgctgcctgtgtgcccccct
ggtgcagggggcctgccacccccacagcgtgagcaagacacagctgacatcctccagaat
ctgacaggccgcaatatatcagactacctggtgaagacctacgcgcaaatcattgggaaa
agcttaaagaataaaatctgggtgaatgagttcagatatggtggcttttccttgggagcc
agcagttccctcatgcttcctccaagccatgaagtcactgatgccattaagcaggtgaag
aaaattttggagctggcacagggaagttctggggatcggtttctcaacagcttatcaagt
ttcatgaaaggcctggatacaaagaacaatgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctaaatgtgatcaacaatgccatccttcgggccaacctccag
cagggtgaaaatcccagtgcttatggaatcactgccttcaatcacccactcaatctcacc
aagcagcagctctctgaagtagctctgatgaccacctctgtggatgtcctcgtgtccatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctattgg
ctggccaactttgtgtgggatatgtgcaactacattgttccagccacactagttgtcatc
atcttcatctgcttccaacagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctcctcctgtttctctatggatggtccatcacccctctcatgtatccggcctcctttgtg
ttcaaaatccctagcacagcatacgttgtgctgaccagtgtgaatctcttcattggcatc
aatggaagtgtggccacctttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaagtctgtctttctcatcttcccccacttctgcctgggccggggactc
attgacatggtgaaaaaccaggctatggctgatgctttggagagatttggagaaaatcgt
tttgtgtcccctctgtcatgggacctggtgggaaggaacctctttgccatggcagtagaa
ggcgttgtgtttttcctcattacagtgctcatccagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagcggaggaggacagagtgatattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgacaggatctgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgtta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacatccaagaagtccatcagaacatgggctactgcccacagttcgatgctgttaatgaa
ctgctaacagggcgagagcacttggagttctttgcactcctgagaggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggcctcgtgaaatatggagaa
aaatacgctgggaattacagtggagggaacagacgcaagctttccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcgcttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctc
acatctcacagcatggaagaatgcgaagccctgtgcactcgaatggcgataatggtcaat
gggcggttcaggtgtctgggcagcgtccagcacctaaagaacaggtttggagatggctac
accatagtggtgagaattgcaggagcaaacccagacctgaagcctgttgaggagttcttt
gggcatgccttccctggaagtgtcctaaaagaaaaacatcggaatatgctgcagtaccaa
cttccctcttcaccatcctccctggccaaaatattcagtattctctcccagaacaaaaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtaaat
tttgctaaggaccaaagtgacgacgaccattctaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
DBGET
integrated database retrieval system
