Cyanistes caeruleus (blue tit): 111942232
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Entry
111942232 CDS
T05602
Symbol
LSM7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03018
RNA degradation
ccae03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111942232 (LSM7)
09123 Folding, sorting and degradation
03018 RNA degradation
111942232 (LSM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111942232 (LSM7)
03041 Spliceosome [BR:
ccae03041
]
111942232 (LSM7)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111942232 (LSM7)
mRNA degradation factors
5'-3' decay
Lsm complex
111942232 (LSM7)
Spliceosome [BR:
ccae03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111942232 (LSM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
111942232
NCBI-ProteinID:
XP_023801181
LinkDB
All DBs
Position
Unknown
AA seq
103 aa
AA seq
DB search
MADKEKKKKESILDLSKYIDKTIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaggagaagaagaagaaggagagcatcttggacctctccaagtacatcgac
aagactatccgggtgaagttccagggcgggcgggaagcaagtggtgtcctgaaaggattt
gaccctcttctgaaccttgtgctggatggtaccattgagtatatgcgagatccggatgat
caatttaaattaacagaagacacgcgtcagctgggacttgtggtttgcagagggacttct
gtggttctcatctgtccacaggatggaatggaagctattccaaaccctttcattcagcag
caagatggctaa
DBGET
integrated database retrieval system
