Cyanistes caeruleus (blue tit): 111942285 Help Entry 111942285         CDS       T05602                                  Symbol SMARCA4 Name (RefSeq) transcription activator BRG1   KO K11647   SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] Organism ccae  Cyanistes caeruleus (blue tit) Pathway ccae03082   ATP-dependent chromatin remodeling Brite KEGG Orthology (KO) [BR:ccae00001]  09120 Genetic Information Processing   09126 Chromosome    03082 ATP-dependent chromatin remodeling     111942285 (SMARCA4)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ccae03021]     111942285 (SMARCA4)    03036 Chromosome and associated proteins [BR:ccae03036]     111942285 (SMARCA4) Transcription machinery [BR:ccae03021]  Eukaryotic type   RNA polymerase II system    Coactivators     BAF/PBAF complex      111942285 (SMARCA4) Chromosome and associated proteins [BR:ccae03036]  Eukaryotic type   Histone modification proteins    HDAC complexes     REST complex      111942285 (SMARCA4)   Chromatin remodeling factors    BAF complex     111942285 (SMARCA4)    PBAF complex     111942285 (SMARCA4)    GBAF(ncBAF) complex     111942285 (SMARCA4) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SNF2-rel_dom Helicase_C SnAC Bromodomain HSA BRK QLQ ResIII HDA2-3 DEAD DUF2009 Motif Other DBs NCBI-GeneID:  111942285 NCBI-ProteinID:  XP_023801224 LinkDB All DBs Position Unknown AA seq 1603 aa AA seqDB search MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHSGHALPAPGYAPDTIHP LHKPLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGGSEHAS SPVPSNGPSSGSAGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQP LPEHLQVAVQGKRPLPGMQPQIPALPPPAGAAQGPGQAPGAGQAPPGYSRPHGIGGPNMP PPGPSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPAS PGPPPPSPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQEL ENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQ SLREARITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVA TYHANTEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLT ELVRQHKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESG KILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEE KKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQS ALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPF LIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKD KHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLN FLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEA QLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKIC NHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMT SLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQ SADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ KVIQAGMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPL KEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKD DAEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSS RKRKREPEGPTGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIK YKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVML LCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEGF GFPPARSVKVKIRRGGRPKPLLSDDESEDEQEEDRSGSGTEDD NT seq 4812 nt NT seq  +upstreamnt  +downstreamnt atggcgactccagagcctccgctgggagggactccccggcctggcccctctcctggtccc ggcccttccccgggatccatgctgggcccctctcccggcccttctccgggatccggacac tcgggacactcaggacatgcgctcccggcgccaggatacgccccggacaccatccacccc ctgcacaagcccctggatccaatgcatgagaagggaatgtcggaggatccgcgctacggg cagatgaagggaatgggaatgcggccagggggacatgcaggaatgggccccccacccagc cccatggatcagcattcccaaggttatccatcccctctgggtggctcggagcacgcctcc agcccagtgccatccaacggcccctccagcggctccgcgggcggctctggagcggcgctg gatggctccggctccgactcgccggcgctgggccggggcccgtccccgttcaacgcggcg cagctgcaccagctccgtgcccagatcatggcctacaagctgctggcgcgggggcagccg ctcccagagcacctgcaggtcgccgtccagggaaagcggcccctgcccgggatgcagccg cagattcctgctctacctccgcccgccggcgccgcacagggcccgggacaagcgcccgga gcggggcaagcgccgcccgggtattccagacctcacggaataggagggcccaacatgccc cctcccggaccctcaggagttccccccggcatgccgggacagccccccgggggccccccc aaaccctggccagaagggccgctgtcagcggcggctccgggcggggccccccagaagctg ctgccgccaccccctgcgggccgtccctcccccgtgcccccggctgtgcccccagcgtcc cctgggccccccccgccctcgccctcaccggggcagccggcgccgcccgcgctcccgatc catcccaaacagaaccggatcacccccatccagaaaccccgcggcctcgaccccgtcgag atcctgcaggagcgggagtacaggctccaagcccgcatcgcccaccgcatccaagagctg gaaaaccttcccggctccttggccggagacctgcggaccaaagcaaccattgagctcaag gctctgcggctgctcaacttccagcgccagctgcggcaggaggtggtggtgtgcatgcgg cgggacacggcgctggagacggcgctcaatgccaaggcctacaagcgtagcaagcggcag tcgctgcgtgaggcccgcatcacggagaagctggagaagcagcagaagatcgagcaggag cggaagcgccggcagaaacaccaggaatacctcaacagcatcctgcagcatgccaaggac ttcaaggaataccaccggagcgtgagtgggaagatccagaagctgaccaaggcagtggcc acgtaccacgccaacaccgagcgcgagcagaagaaggagaacgagcgcatcgagaaggag cggatgcgccggctcatggcagaggatgaggagggctaccggaagctcatcgaccagaag aaggacaagcgcctggcctacttgctgcagcagacagatgagtacgtggccaacctaaca gagcttgtgaggcagcacaaggcagcccaggtggccaaggagaagaagaagaagaaaaaa aagaagaaggcggagaacgccgagggacaggctccagccatcggccccgatggggagcca ctggatgagacgagccagatgagcgacctcccggtgaaggtgatccatgtggagagtggg aagatcctcaccggcaccgatgcacccaaggccgggcagctggaggcctggctggaaatg aaccctgggtacgaggtggctccacgctccgacagcgaggagagcggctccgaggaggag gaggaggaggaggaagaggagcagccacagccagcacagccagcactgcctgtggaggag aagaagaagattccagatccagacagtgacgatgtctcggaagtggatgcccgacacatc attgagaacgccaagcaggacgtggatgacgagtacggggtgtcgcaggcgctggcgcgg gggctgcagtcctactacgccgtggctcacgccgtgactgagcgcgtggacaagcagtcg gccctgatggtcaacggcgtcctcaagcagtaccagatcaaaggcctggagtggctcgtg tccctgtacaacaacaacctcaatggaatcctggcggacgagatgggactggggaaaacc atccagaccatcgccctcatcacgtacctcatggagcataagcggatcaacggccccttc ctcatcatcgtcccactctcgactttgtccaactgggcctatgagttcgacaaatgggct ccttccgtggtcaaggtctcctacaagggctctccggcggcacgacgcgccttcgtccca cagctccggagtggaaaattcaacgtcctgctcacaacgtacgagtacatcatcaaggac aagcacatcctggccaagatccgctggaagtacatgatcgtggacgagggacaccggatg aagaaccaccactgcaaactgacgcaggtgctcaacacccactacgtggccccacggcgg ctgctgctcactgggaccccgctccagaacaagctcccggagctctgggcgctcctcaac ttcctgctccccaccatcttcaagagctgcagcaccttcgagcagtggttcaacgcgccg tttgccatgaccggggagaaggtggatctgaacgaggaggagacgatcctcattatccgc cgcctgcacaaggtgctccggcccttcctgctccggcgcctcaagaaggaggtggaagct cagctgccagaaaaggtcgagtacgtgatcaaatgcgacatgtcggcgctgcagcgggtc ctgtaccggcacatgcaggccaagggtgtcctcctcaccgacggctctgagaaagacaag aaggggaagggcggcacgaagacactgatgaacacgatcatgcagctgcgcaagatctgc aaccacccctacatgttccagcacatcgaggaatccttctcagagcacttggggttcacg ggcgggatcgtgcaggggctggatttgtaccgtgcctccgggaaatttgagctcctggac cggatcctgcccaagctccgggccaccaaccacaaggtgctgctcttctgccagatgacc tccctgatgaccatcatggaggactattttgcttaccgcggcttcaaatacctcaggctg gatgggaccacgaaggcagaggaccggggaatgttgctgaagacattcaatgagccaggc tccgagtatttcatcttcctgctgagcacgcgggccggggggctggggctcaacctgcag tcagctgacaccgtcatcatcttcgacagcgactggaacccacaccaggacctgcaggcc caggaccgggcccaccgcatcgggcagcagaacgaggtccgcgtgctccggctctgcacc gtcaacagcgtggaggagaagatcctggcggccgccaagtacaagctcaacgtggaccag aaggtgatccaggccggaatgttcgaccagaaatcctccagccacgagcgccgggcgttc cttcaagccatcctggagcacgaggagcaggatgagagcagacagagcgcgggcagtggc agcttcccccacgctgcctcctccctgtgcctgggcgctgagtcggaggaagcacctcta aaggaggaggacgaggtgcccgacgacgagacggtgaatcagatgatcgcccggcacgag gaggagttcgacctgttcatgcgcatggacctggaccggcggcgggaggaggcgcggaac cccaagcggaagccgcggctgatggaggaggacgagctcccatcctggatcctgaaggac gacgccgaggtggagcggctcacctgcgaggaagaggaggagaagatgttcggccgcggc tcccggcaccgcaaggaagtggattacagcgattccctcacggaaaaacagtggctcaag gccatcgaggaggggacgctggaggagatagaggaggaagtccggcagaagaaatcctct cggaagcggaagcgagagcccgagggtcccacggggccccccccaagcgcccggagccgg gataaggatgaggagagccggaagcagaagaagagggggcggcccccagctgaaaaactg tccccaaatccaccccccctgactcggaaaatgcggaaaatcgtggatgcggtcatcaag tacaaggacagcagcagcgggcgacagctgagtgaagttttcatccagctcccgtcccgc aaggagctgccagagtactacgagctcatccggaaacctgtggacttcaagaagatcaag gagcggatccgaaaccacaagtaccggagcctcaacgacctggagaaggatgtgatgctg ctgtgccagaacgcccagaccttcaacctggaggggtccctgatctacgaggattccatc gtgctgcagtccgtgttcaccagcgtccggcagaaggtggaaaaggaggaggaaagtgac ggagaggagagcgaggaggaggaggagggagaggaagaaggatccgagtccgaggggttt ggattccccccagcccgctcagtgaaggtgaagatccggcgggggggacgccccaaaccc ctcctgagcgacgacgagagcgaggatgaacaggaggaggatcgctccggcagtggcacc gaggacgactga

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