Cyanistes caeruleus (blue tit): 111942391
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Entry
111942391 CDS
T05602
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15
KO
K13167
SR-related and CTD-associated factor 4
Organism
ccae
Cyanistes caeruleus (blue tit)
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccae03021
]
111942391 (SCAF4)
03041 Spliceosome [BR:
ccae03041
]
111942391 (SCAF4)
Transcription machinery [BR:
ccae03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111942391 (SCAF4)
Spliceosome [BR:
ccae03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
111942391 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111942391
NCBI-ProteinID:
XP_023801314
LinkDB
All DBs
Position
1
AA seq
797 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPIAENATNNEGSPPPPAKVPSEAPQVTANSVPSVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKAAFTAPEQKT
SFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPALTSLSFSTQAGWCSMPGGFPGEG
MQQPVFPQLPNMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVMPP
AAPVQPTFQSPFPVQAEPHLQKPHQQDMEVEQPPIQEGKRHVSDSRKSRSRSASRSPKRR
RSRSGSRSRRSRHRRSRSRDRRRHSPKSRSQERREHERERERRSKGLPQIKSETVSVCST
TLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDANRALQKLSRGNF
KVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETLSP
EWKGIPKKSENEVAQNGGAEAAHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPSGP
PMVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPLHLPPGFLPPGPPPPITPP
VSVPHTPAVNIPNSTATGGNEDATKESSVGNPIPTVVSGGRGNAESTDTSKIYGTIPPPV
APTSVPAPVTQAVPLLA
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctccaatttcccgagccaagatgattctcatcacaaaagctgccatt
aaagctattaagctttacaagcatgttgtccagattgtggagaagtttatcaaaaagtgc
aagccggagtacaaagtcccaggcttgtacgtcatcgactccatcgttcggcagtctcgg
caccagttcggaacagacaaagatgtttttgggccaaggttctctaagaacattactgcc
acattccagtatttgtatctgtgtccatctgaagacaagagtaaaatagttcgtgtcctg
aacctctggcagaaaaatggagtattcaaaattgaaataattcagcctctcttggatatg
gcagcaggaaccagtgccactgcacccatagcagagaatgctactaacaatgaaggttcg
ccgccgcctccggccaaggttccctcagaggccccgcaagtgaccgcgaactcagtgccc
agcgtgccacagctgcccagttctgatgcctttgcagctgtagcccagttgttccagaca
acacaaggacaacagcttcagcaaatcctgcagaccttccaacagcctcagaagccccag
tcaccggtcatagacaacactgtgatggctcaggttcaagctattactgctcagttgaaa
accacagcagcacagcccccagagcagaaagctgctttcacagcacctgagcagaaaaca
tcgtttgacaaaaagctgctagatcggtttgactatgatgatgaaccagaagcagtggaa
gattcaaagaaagaagattcagctccttccccttcagtgtctcagccggctttgacctct
ctctcattcagtacacaggctggatggtgctcaatgccgggtggttttccaggagaaggc
atgcagcagccagtatttcctcagctcccaaatatggatccttttcagcagcggatgatg
ggaatgcagcaggatccgatgcggcaccaggtgccacttcctccgaatgggcagatgcca
ggctttggtctcctgcctaccccccagttcccacccatggctcagccagtgatgcctcca
gcagcaccagtgcagccaactttccagtctcccttcccagtccaggctgagccacacctg
cagaaaccccatcagcaggatatggaagtggaacagccacccattcaggagggaaaaagg
catgtttccgacagtaggaaatcaagatctagatctgcatcaaggtcccccaagaggaga
cgctcgcggtcgggctcgcgctcgcggcgctcgcggcaccggcgctcgcgctcgcgggac
cggcgccggcactcgcccaagtcccgctcccaggagcggcgcgagcacgagcgggagagg
gagcgccgctccaagggcctgccccagatcaagtcagagactgtcagtgtttgcagtacc
acgctgtgggtaggacagctcgacaaaaggacaactcagcaggatgtgggaagtctcttg
gaggagtttggccccattgagtcgatcaatatgataccacccagaggatgtgcctacatt
gtcatggtgcacagacaagatgccaacagagccctccagaaactgagccgaggcaacttc
aaagtcaaccagaaatccatcaagattgcctgggctctgaataaaggaataaagccagac
tacaagcagtattgggatgtagaattgggtgtgacatacataccatgggacaaagtcaaa
cctgaagatcttgaaagtttctgtgaaggaggaatgctggacaacgagacccttagtcca
gagtggaagggaattcccaagaagtctgaaaatgaagtggctcagaatggaggcgcagaa
gctgcacacaatgaaccagtgtcacctattcccaaagctttacctgtcccaattcctgtt
cccatgcctgcaccaataacagtacctcctccacaggttcccccccatccatcagggcct
cccatggttggtgcactccagccccctgctttcacagcacctttaggaatcccccctcct
ggatttgcccccggggtgccaccgccgccgccgcctccattcctccggcccggcttcaac
ccgctgcatttacctccagggttccttcctcctgggccaccacctcccataactcctccg
gtctctgtcccgcacactccggcagtgaacatcccaaactctacagcaactggtgggaat
gaggacgctacaaaggagtcgtcagtaggaaatcccatcccaacagtagtttctggaggc
agagggaatgctgaaagtactgacacttccaaaatctatggcactattccacctcctgta
gcacctaccagtgtccctgctcccgtcacccaggctgttccactccttgcttga
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