Cyanistes caeruleus (blue tit): 111942929
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Entry
111942929 CDS
T05602
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccae
Cyanistes caeruleus (blue tit)
Pathway
ccae03013
Nucleocytoplasmic transport
ccae05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ccae00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111942929 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
111942929 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccae03019
]
111942929 (NUP98)
03036 Chromosome and associated proteins [BR:
ccae03036
]
111942929 (NUP98)
Messenger RNA biogenesis [BR:
ccae03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111942929 (NUP98)
Chromosome and associated proteins [BR:
ccae03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111942929 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111942929
NCBI-ProteinID:
XP_023801754
UniProt:
A0A8C0U762
LinkDB
All DBs
Position
1
AA seq
1734 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTSSGGAFGTSAFGSNNTTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLAYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLSSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEREEEEEAHEVTRFYTNPIAKPIPQSLE
GSGHKPPAGVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQDERDEEAEAVHQLHPAGI
VLTRAGYYTIPSLEELARLTNDRNECIVTDFTIGRKGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDERKPPVGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMGYEGRLEA
VSRKQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPSKVDTKKLKTTPVPPPGQ
LLPQQMALNGKPAPLAQPPELEQLGRVVELDSDMADITQEPAHEPLAEDALEEQEAVPAS
THIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVKMDTSQEICSPRLPISKSQG
QKRHTVAGLLQSKFASVLSQAPSVAVADAKGPRTLGSPPCAALWSSPLASAFSVPAAVPE
VQVKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQLSGS
SEAEDPQLEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEIKLK
HSTVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPAVAETVVKHWCLAWTLCEAIWGNL
KELEASLEEPSEYVLALERRRAFSRWLSETAAGRIEEEVSLSRHGSHVEAVFSCLTGKRI
GEACRLAQQAGDHRLALLLAQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFALLA
GKPVWQLSERITVNVCSLLDWKRCVAVHLWYLLPPTASISRALAMYESAFQNTSEYEKYA
CCPLPPYLEDSGCVIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPLDFR
LSWHLWEVLRALNYCHLSQQSWGVLNSSYAAQLESEGLWEWAVFVMLHEPDTPTREKAVR
ELLSRHCALADTPESWAKESFLTQRLCVPPRWIHEAKAVRARMEGDRHKEALFLFKAGHW
NQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVNEML
DRIQQLDVSTYELERLHTKVTSLCNRIEQLQCHNARDRLAQSGTCHPCPCATPG
NT seq
5205 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggaactccattcggaggcagcaccggctttggcacaacttca
acttttgggcaaaatgccggctttggtacgagcagcggaggagccttcgggacgtcggcc
tttggctccaacaacaccacgggcagcctctttgggagcacgcagacaaagccaggaggg
ttgtttggctcaaccacattcaaccagccagccacctcctccaccagcactggcttcggg
tttggaacatccactggaacgtcaaacagcctctttggaaccaccagcactggtggaagc
ctcttctcatcccagaataatgcctttgcacagaacaaaccagctggttttggaaacttt
ggtacgagcaccagcagtggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagctttactgctgctccaactggcacc
actattaaatttaatcccccgaccggcaccgacaccatggtgaaatccggcgtcagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctg
gaggaactccgcttggaagactaccaggcaaataggaaagggcccacgaatcctgtcgga
gcaggggcaactgctggcttgtttggctcttccactgccacctccagcacagccacagga
ctttttggctcttccactaccaatacaggcttttcctatggacagaataaaactgctttt
ggaaccagtacgaccggctttggcaccggcaccaccggggggctctttgggcagcagtcg
cagaccacgagtctgttcaacaaacccttcggccaggccaccaccacgcagaacaccggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccaacaccatgggtctcttt
ggggtcacccagccctcacagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacaggatttggggtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggaaccaccacgaccagcgct
ccctcgttcggtaccaccacaggcgggggcctctttggttttggtgccaacactgctgga
aacagcttgtttggaaataagcctgcgactgggactctgggcactgggcttggaacaggc
tttggaacagctctgggggcaggacagacgtccctgtttggaaacacccagccaaagctg
gggggaacgctgggaacgggagcatttggagccccaggattcaacacatccacggccacc
ctgggctttggggcccctcagcctgctgtagctctgacagaccccaacgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctggcctactcaccctttggagactcc
cccctcttcagaaaccccatgtcagaccccaagaagaaggaagagaggctgaagccaacc
aacccagcagcccagaaggccttgacaacccccacccactacaagctgaccccacgccct
gccaccagagtgcggcccaaggccctgcagtcagcgggctcagccaagtcccagctcttt
gatgggctggatgacgacgagccctccctggccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcagcagcagcaacctgttctctcccgtgagccgg
gagaacgaggacctggcgtcgccgtcggagtacccggagaatggggacaggttcttcctg
tcggtgcctcccgaggagaaccacaggcaggacggggagcgggaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaatcccatcgccaagcccatcccccagagcctggag
ggcagcgggcacaagccccccgcgggcgtggacgacaccatcgtggcgctcaacatgcgc
gcggcgctgcgcaatgggctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggatgagcgggacgaggaggccgaggccgtgcaccagctgcatcctgcagggatt
gttctgacacgagctggctactacaccatcccgtccctggaggagctggcccggctgacc
aacgacaggaacgaatgtatcgtgacagacttcaccatcggccgcaagggttatggatca
atatacttcgaaggagaagtaaatctaacaaacttaaacctggatgagattgtacatatc
cggagaaaagaagttattgtttaccctgatgatgaaagaaagcctcccgttggggaaggg
ctaaataggcgggcagaggtgacgctggacggggtgtggcccacggacaagacgtcgcgc
tgcctgatcaagagccctgagcgcctggcggagatgggctacgagggccggctggaggct
gtgtcccgcaagcagggcgcccgcttcaaggagtaccgccccgagaccggctcctgggtc
ttcaaggtagcacacttttccaagtatggcttgcaagattcagatgaggaagaggaagat
cacccttcaaaagtggacaccaagaagttaaagaccacacctgtgccacccccagggcag
ctgctgccccagcagatggccctgaacggcaaaccagcgcccctggctcagcccccggag
ctggagcagctgggcagggtggtggagctggacagtgacatggcagacatcacccaggag
ccagcccacgagcccttggcagaggacgccctggaggagcaggaggcggtgccggcgtcc
acgcacatcgcatccacgcagggcatcaacccctacgtgctgcagatcatgaaagcttcc
ttgcttgctgatgatgacgacctggatttgatcctggattatcctgggaagcagcctgtc
aagatggacacttcccaagagatctgctcccccaggcttcccatttcaaaatcacaagga
cagaaaagacacacagttgctgggctgctgcagtccaagtttgccagtgtcctttcccaa
gcaccgagtgttgctgtggcagatgccaagggcccgaggactttgggcagtcccccctgt
gctgccctgtggtcgtccccgctggcctcggcgttctcggtgcccgcggcggtgcccgag
gtgcaggtgaagacggtcggggcccgccggcagcgcgggctcgtccccctggagagatcc
atcacctatggaaaagggaagctcctgatggacatgggactgttcatgggccgctcgttc
cgtgtcggttgggggcccaactggactctggtcaattgtggagatcagctgagtggctcg
agcgaagcggaggatccgcagctggagcccgtggaatatggattcctgccgactcccgtt
gctcccaaatcactcacagaatcccctttcaaagttcatgtggaaaagttgagcttggaa
cagtggaagatggacagagacaaggagctgtatctcactcctctggagatcaagctgaag
cacagcactgtccatatggatgagccctgtcctctcctggcccccaaccccggagtctca
gctatccatgactatgctgactgggccaggaaagcatctgaggatcccgctgtggcagag
actgttgtgaagcactggtgcttggcctggacgttgtgtgaggccatttggggcaacctg
aaggagctggaggccagcctggaggagcccagtgagtacgtgctggcgctggagcgccgc
agggcgttctcacggtggctgtcggagacggcggccgggcgcatcgaggaggaggtgtcc
ctgtcccggcacggcagccacgtcgaggccgtgttcagctgcctcacggggaagaggatc
ggcgaggcctgcaggctggcacagcaggcaggtgaccaccgtctggcactgctgctggca
cagctggccgggagccagcccgtgcgggacctgctgaccctgcagctggtggactggcac
cgcctgcacagcgaccgcttcatccaggaggagcggctgcgcctgttcgcgctgctggcg
ggcaagccggtgtggcagctctccgagaggatcaccgtcaacgtgtgctcgctgctggac
tggaagcgctgcgtggccgtgcacctgtggtacctgctgccccccacggcctccatctcc
agggctctggccatgtacgagtcggcctttcagaacacctcagaatatgaaaaatacgcc
tgctgtcctctgcctccttacctggaagattcggggtgtgtcattgaagaagatgacaat
ggaggaaggcccctgagagatgtctgcttccatttgttaaagctctacagtgacaggtcc
tatgagcttgaccagctgctggatcccaggagtgtcacctctgacccgctggatttccgc
ctcagctggcacctgtgggaggtgctgcgggcactgaactactgccacctgtcccagcag
agctggggggtgctgaacagcagctatgctgcccagctggagagcgaggggctgtgggaa
tgggccgtgttcgtcatgctgcacgagcctgacacgcccacgcgggagaaggccgtgcgg
gagctgctgagccggcactgcgccctcgccgacacccccgagtcctgggccaaggaatcc
ttcctgacacagcggctctgcgtgcccccgcgctggattcacgaggccaaggcggtccgg
gccaggatggagggtgacaggcacaaagaggcccttttcctgttcaaggctgggcactgg
aaccagtgccacaagctggttgtcaggcacttggcctcagatgcaattatcaacgagaac
tacaagtacctgaagggattcctggaagacctggcgcccccggagcgcagcgcgctcatc
caggactgggagctggcagggctggtgtacctggactacatccgtgtgaacgagatgctg
gacaggattcagcagctggatgtgtccacctacgagctggagcggttacacaccaaagtg
acgtccctgtgcaacaggatagagcagctgcagtgccacaacgccagggaccgcctggct
cagtcaggtacgtgccacccctgcccctgtgccacacctggctga
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integrated database retrieval system
